RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 ANAPC15P60006 121 aa12.35□□□□□ -0.43
COL4A3-204ENST00000469504 ZP2Q05996 745 aa12.35□□□□□ -0.43
COL4A3-204ENST00000469504 ADAM15Q13444 863 aa12.35□□□□□ -0.43
COL4A3-204ENST00000469504 CAMK1Q14012 370 aa12.35□□□□□ -0.43
COL4A3-204ENST00000469504 TARBP2Q15633 366 aaKnown RBP12.35□□□□□ -0.43
COL4A3-204ENST00000469504 PAN2Q504Q3 1202 aaKnown RBP12.35□□□□□ -0.43
COL4A3-204ENST00000469504 SPOUT1Q5T280 376 aaKnown RBP12.35□□□□□ -0.43
COL4A3-204ENST00000469504 B3GNT9Q6UX72 402 aa12.35□□□□□ -0.43
COL4A3-204ENST00000469504 MIER3Q7Z3K6 550 aa12.35□□□□□ -0.43
COL4A3-204ENST00000469504 LRRC43Q8N309 656 aa12.35□□□□□ -0.43
COL4A3-204ENST00000469504 WASF1Q92558 559 aa12.35□□□□□ -0.43
COL4A3-204ENST00000469504 FAM20AQ96MK3 541 aa12.35□□□□□ -0.43
COL4A3-204ENST00000469504 LRFN3Q9BTN0 628 aa12.35□□□□□ -0.43
COL4A3-204ENST00000469504 INO80BQ9C086 356 aaPredicted RBP12.35□□□□□ -0.43
COL4A3-204ENST00000469504 ADAMTS10Q9H324 1103 aa12.35□□□□□ -0.43
COL4A3-204ENST00000469504 UNC45AQ9H3U1 944 aa12.35□□□□□ -0.43
COL4A3-204ENST00000469504 CHST12Q9NRB3 414 aa12.35□□□□□ -0.43
COL4A3-204ENST00000469504 PUF60Q9UHX1 559 aaKnown RBP12.35□□□□□ -0.43
COL4A3-204ENST00000469504 CD207Q9UJ71 328 aa12.35□□□□□ -0.43
COL4A3-204ENST00000469504 PRR33A8MZF0 331 aa12.34□□□□□ -0.43
COL4A3-204ENST00000469504 TBX3O15119 743 aa12.34□□□□□ -0.43
COL4A3-204ENST00000469504 MBTPS2O43462 519 aa12.34□□□□□ -0.43
COL4A3-204ENST00000469504 CHMP2AO43633 222 aa12.34□□□□□ -0.43
COL4A3-204ENST00000469504 EOMESO95936 686 aa12.34□□□□□ -0.43
COL4A3-204ENST00000469504 SRGAP2BP0DMP2 458 aa12.34□□□□□ -0.43
COL4A3-204ENST00000469504 SKIP12755 728 aa12.34□□□□□ -0.43
COL4A3-204ENST00000469504 DARSP14868 501 aaKnown RBP12.34□□□□□ -0.43
COL4A3-204ENST00000469504 NDUFV1P49821 464 aa12.34□□□□□ -0.43
COL4A3-204ENST00000469504 PLCB3Q01970 1234 aa12.34□□□□□ -0.43
COL4A3-204ENST00000469504 COASYQ13057 564 aa12.34□□□□□ -0.43
COL4A3-204ENST00000469504 ERICH6BQ5W0A0 696 aa12.34□□□□□ -0.43
COL4A3-204ENST00000469504 PPP4R3AQ6IN85 833 aa12.34□□□□□ -0.43
COL4A3-204ENST00000469504 ZNF410Q86VK4 478 aa12.34□□□□□ -0.43
COL4A3-204ENST00000469504 ABI1Q8IZP0 508 aa12.34□□□□□ -0.43
COL4A3-204ENST00000469504 ETNPPLQ8TBG4 499 aa12.34□□□□□ -0.43
COL4A3-204ENST00000469504 TRAIPQ9BWF2 469 aa12.34□□□□□ -0.43
COL4A3-204ENST00000469504 SLKQ9H2G2 1235 aaPredicted RBP12.34□□□□□ -0.43
COL4A3-204ENST00000469504 CD320Q9NPF0 282 aa12.34□□□□□ -0.43
COL4A3-204ENST00000469504 TLR9Q9NR96 1032 aa12.34□□□□□ -0.43
COL4A3-204ENST00000469504 DDX25Q9UHL0 483 aaKnown RBP12.34□□□□□ -0.43
COL4A3-204ENST00000469504 MYH9P35579 1960 aaKnown RBP12.33□□□□□ -0.44
COL4A3-204ENST00000469504 IGKV6-21A0A0C4DH24 114 aa12.33□□□□□ -0.44
COL4A3-204ENST00000469504 A0A0U1RQF3 1178 aa12.33□□□□□ -0.44
COL4A3-204ENST00000469504 CCDC194A0A1B0GVG4 234 aa12.33□□□□□ -0.44
COL4A3-204ENST00000469504 DCXO43602 365 aa12.33□□□□□ -0.44
COL4A3-204ENST00000469504 TBX10O75333 385 aa12.33□□□□□ -0.44
COL4A3-204ENST00000469504 FGF18O76093 207 aa12.33□□□□□ -0.44
COL4A3-204ENST00000469504 TDP2O95551 362 aa12.33□□□□□ -0.44
COL4A3-204ENST00000469504 SFPQP23246 707 aaKnown RBP eCLIP12.33□□□□□ -0.44
COL4A3-204ENST00000469504 PSMC5P62195 406 aa12.33□□□□□ -0.44
COL4A3-204ENST00000469504 PPP2R5CQ13362 524 aa12.33□□□□□ -0.44
COL4A3-204ENST00000469504 FAM102BQ5T8I3 360 aa12.33□□□□□ -0.44
COL4A3-204ENST00000469504 TRMT1LQ7Z2T5 733 aaKnown RBP12.33□□□□□ -0.44
COL4A3-204ENST00000469504 THNSL1Q8IYQ7 743 aa12.33□□□□□ -0.44
COL4A3-204ENST00000469504 LRRC71Q8N4P6 559 aa12.33□□□□□ -0.44
COL4A3-204ENST00000469504 COLGALT1Q8NBJ5 622 aa12.33□□□□□ -0.44
COL4A3-204ENST00000469504 NLRP7Q8WX94 980 aa12.33□□□□□ -0.44
COL4A3-204ENST00000469504 MSLNLQ96KJ4 702 aa12.33□□□□□ -0.44
COL4A3-204ENST00000469504 SCLT1Q96NL6 688 aa12.33□□□□□ -0.44
COL4A3-204ENST00000469504 UIMC1Q96RL1 719 aa12.33□□□□□ -0.44
COL4A3-204ENST00000469504 PHF20Q9BVI0 1012 aa12.33□□□□□ -0.44
COL4A3-204ENST00000469504 MRPL9Q9BYD2 267 aaKnown RBP12.33□□□□□ -0.44
COL4A3-204ENST00000469504 GCOM2Q9BZD3 368 aaPredicted RBP12.33□□□□□ -0.44
COL4A3-204ENST00000469504 NGRNQ9NPE2 291 aaKnown RBP12.33□□□□□ -0.44
COL4A3-204ENST00000469504 TYW1Q9NV66 732 aaKnown RBP12.33□□□□□ -0.44
COL4A3-204ENST00000469504 SEPT9Q9UHD8 586 aaPredicted RBP12.33□□□□□ -0.44
COL4A3-204ENST00000469504 RBAK-RBAKDNI3L0D1 243 aa12.32□□□□□ -0.44
COL4A3-204ENST00000469504 GAS2O43903 313 aaKnown RBP12.32□□□□□ -0.44
COL4A3-204ENST00000469504 PFKFB2O60825 505 aa12.32□□□□□ -0.44
COL4A3-204ENST00000469504 PPFIA3O75145 1194 aa12.32□□□□□ -0.44
COL4A3-204ENST00000469504 DNAJB1P25685 340 aa12.32□□□□□ -0.44
COL4A3-204ENST00000469504 PLA2G5P39877 138 aa12.32□□□□□ -0.44
COL4A3-204ENST00000469504 KRT17Q04695 432 aa12.32□□□□□ -0.44
COL4A3-204ENST00000469504 SCRN1Q12765 414 aa12.32□□□□□ -0.44
COL4A3-204ENST00000469504 BMS1Q14692 1282 aaKnown RBP12.32□□□□□ -0.44
COL4A3-204ENST00000469504 NPY5RQ15761 445 aa12.32□□□□□ -0.44
COL4A3-204ENST00000469504 UGCGQ16739 394 aa12.32□□□□□ -0.44
COL4A3-204ENST00000469504 NEK8Q86SG6 692 aa12.32□□□□□ -0.44
COL4A3-204ENST00000469504 ECHDC2Q86YB7 292 aa12.32□□□□□ -0.44
COL4A3-204ENST00000469504 SMRP1Q8NCR6 262 aa12.32□□□□□ -0.44
COL4A3-204ENST00000469504 MICAL1Q8TDZ2 1067 aa12.32□□□□□ -0.44
COL4A3-204ENST00000469504 MRPS27Q92552 414 aaKnown RBP12.32□□□□□ -0.44
COL4A3-204ENST00000469504 FAM122AQ96E09 287 aa12.32□□□□□ -0.44
COL4A3-204ENST00000469504 PPP1R16BQ96T49 567 aa12.32□□□□□ -0.44
COL4A3-204ENST00000469504 IGFLR1Q9H665 355 aa12.32□□□□□ -0.44
COL4A3-204ENST00000469504 CWH43Q9H720 699 aa12.32□□□□□ -0.44
COL4A3-204ENST00000469504 TLE6Q9H808 572 aa12.32□□□□□ -0.44
COL4A3-204ENST00000469504 KCNMB3Q9NPA1 279 aa12.32□□□□□ -0.44
COL4A3-204ENST00000469504 FSCN2O14926 492 aa12.31□□□□□ -0.44
COL4A3-204ENST00000469504 MAFO75444 373 aaPredicted RBP12.31□□□□□ -0.44
COL4A3-204ENST00000469504 P4HBP07237 508 aaKnown RBP12.31□□□□□ -0.44
COL4A3-204ENST00000469504 FGFR1P11362 822 aa12.31□□□□□ -0.44
COL4A3-204ENST00000469504 IRS1P35568 1242 aa12.31□□□□□ -0.44
COL4A3-204ENST00000469504 QARSP47897 775 aaKnown RBP12.31□□□□□ -0.44
COL4A3-204ENST00000469504 NRIP1P48552 1158 aa12.31□□□□□ -0.44
COL4A3-204ENST00000469504 GATMP50440 423 aa12.31□□□□□ -0.44
COL4A3-204ENST00000469504 RAB27AP51159 221 aa12.31□□□□□ -0.44
COL4A3-204ENST00000469504 DLX2Q07687 328 aaPredicted RBP12.31□□□□□ -0.44
COL4A3-204ENST00000469504 STK3Q13188 491 aa12.31□□□□□ -0.44
COL4A3-204ENST00000469504 INF2Q27J81 1249 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms