RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 CDK7P50613 346 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 NPEPPSP55786 919 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 NLRP6P59044 892 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 SLC34A1Q06495 639 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 MGAT5Q09328 741 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 SF3A3Q12874 501 aaKnown RBP eCLIP9.73□□□□□ -0.855e-6■■■■■ 39.5
SMARCE1-207ENST00000469334 MPP3Q13368 585 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 SLC29A2Q14542 456 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 IL17AQ16552 155 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 CCDC174Q6PII3 467 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 MPRIPQ6WCQ1 1025 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 TSHZ1Q6ZSZ6 1077 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 SLFN11Q7Z7L1 901 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 ANKLE2Q86XL3 938 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 USHBP1Q8N6Y0 703 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 SUPT20HQ8NEM7 779 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.73□□□□□ -0.856e-7■■■■□ 23.4
SMARCE1-207ENST00000469334 SCG3Q8WXD2 468 aaKnown RBP9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 RSPH1Q8WYR4 309 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 ZNF512BQ96KM6 892 aaPredicted RBP9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 SERPINB12Q96P63 405 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 TGS1Q96RS0 853 aaKnown RBP9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 TSPAN18Q96SJ8 248 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 PHACTR1Q9C0D0 580 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 DHX36Q9H2U1 1008 aaKnown RBP9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 EPB41L1Q9H4G0 881 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 INTUQ9ULD6 942 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 STARD13Q9Y3M8 1113 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 ADAMTS13Q76LX8 1427 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 TMEM120BA0PK00 339 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 ITGA2BP08514 1039 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 PABPC4LP0CB38 370 aaKnown RBP9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 GJA8P48165 433 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 BPIFB4P59827 614 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 DR1Q01658 176 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 LRRC63Q05C16 580 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 PDE4DQ08499 809 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 STRN3Q13033 797 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 CBX3Q13185 183 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 ITGA9Q13797 1035 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 CCDC92Q53HC0 331 aaPredicted RBP9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 MFSD6Q6ZSS7 791 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 ARHGEF18Q6ZSZ5 1173 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 ZNF554Q86TJ5 538 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 EXOC3L1Q86VI1 746 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 CCNJLQ8IV13 435 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 ST13P4Q8IZP2 240 aaPredicted RBP9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 IP6K1Q92551 441 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 GFM2Q969S9 779 aaKnown RBP9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 SHISA4Q96DD7 197 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 MPHOSPH6Q99547 160 aaKnown RBP9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 ZNF184Q99676 751 aaPredicted RBP9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 C7orf25Q9BPX7 421 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 DENND2DQ9H6A0 471 aaPredicted RBP9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 SAR1AQ9NR31 198 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 STXBP5LQ9Y2K9 1186 aa9.73□□□□□ -0.85
SMARCE1-207ENST00000469334 RPTORQ8N122 1335 aa9.72□□□□□ -0.85
SMARCE1-207ENST00000469334 SMIM31A0A1B0GVY4 71 aa9.72□□□□□ -0.85
SMARCE1-207ENST00000469334 H0Y3Z8 333 aa9.72□□□□□ -0.85
SMARCE1-207ENST00000469334 BIRC5O15392 142 aa9.72□□□□□ -0.85
SMARCE1-207ENST00000469334 MBD4O95243 580 aa9.72□□□□□ -0.85
SMARCE1-207ENST00000469334 LYNP07948 512 aa9.72□□□□□ -0.85
SMARCE1-207ENST00000469334 GIT2Q14161 759 aa9.72□□□□□ -0.85
SMARCE1-207ENST00000469334 RBM26Q5T8P6 1007 aaKnown RBP9.72□□□□□ -0.85
SMARCE1-207ENST00000469334 CHADLQ6NUI6 762 aa9.72□□□□□ -0.85
SMARCE1-207ENST00000469334 PPP1R21Q6ZMI0 780 aa9.72□□□□□ -0.85
SMARCE1-207ENST00000469334 MARK2Q7KZI7 788 aaKnown RBP9.72□□□□□ -0.85
SMARCE1-207ENST00000469334 PEX26Q7Z412 305 aa9.72□□□□□ -0.85
SMARCE1-207ENST00000469334 DAAM2Q86T65 1068 aa9.72□□□□□ -0.85
SMARCE1-207ENST00000469334 NGDNQ8NEJ9 315 aaKnown RBP9.72□□□□□ -0.85
SMARCE1-207ENST00000469334 TTC8Q8TAM2 541 aa9.72□□□□□ -0.85
SMARCE1-207ENST00000469334 EPS8L3Q8TE67 593 aaKnown RBP9.72□□□□□ -0.85
SMARCE1-207ENST00000469334 SLC7A6OSQ96CW6 309 aaPredicted RBP9.72□□□□□ -0.85
SMARCE1-207ENST00000469334 ERP27Q96DN0 273 aa9.72□□□□□ -0.85
SMARCE1-207ENST00000469334 LRRC37BQ96QE4 947 aa9.72□□□□□ -0.85
SMARCE1-207ENST00000469334 TRIM51Q9BSJ1 452 aa9.72□□□□□ -0.85
SMARCE1-207ENST00000469334 YIPF2Q9BWQ6 316 aa9.72□□□□□ -0.85
SMARCE1-207ENST00000469334 CCDC113Q9H0I3 377 aa9.72□□□□□ -0.85
SMARCE1-207ENST00000469334 RNF41Q9H4P4 317 aaPredicted RBP9.72□□□□□ -0.85
SMARCE1-207ENST00000469334 SH3GLB1Q9Y371 365 aa9.72□□□□□ -0.85
SMARCE1-207ENST00000469334 UMODL1Q5DID0 1318 aa9.72□□□□□ -0.85
SMARCE1-207ENST00000469334 LAD1O00515 517 aa9.71□□□□□ -0.85
SMARCE1-207ENST00000469334 RIPK2O43353 540 aa9.71□□□□□ -0.85
SMARCE1-207ENST00000469334 TLR2O60603 784 aa9.71□□□□□ -0.85
SMARCE1-207ENST00000469334 GNA14O95837 355 aa9.71□□□□□ -0.85
SMARCE1-207ENST00000469334 ITGA4P13612 1032 aa9.71□□□□□ -0.85
SMARCE1-207ENST00000469334 RARGP13631 454 aa9.71□□□□□ -0.85
SMARCE1-207ENST00000469334 ZNF24P17028 368 aa9.71□□□□□ -0.85
SMARCE1-207ENST00000469334 HSPA6P17066 643 aa9.71□□□□□ -0.85
SMARCE1-207ENST00000469334 AMPD3Q01432 767 aa9.71□□□□□ -0.85
SMARCE1-207ENST00000469334 KLHL30Q0D2K2 578 aa9.71□□□□□ -0.85
SMARCE1-207ENST00000469334 KCNMA1Q12791 1236 aa9.71□□□□□ -0.85
SMARCE1-207ENST00000469334 NPY5RQ15761 445 aa9.71□□□□□ -0.85
SMARCE1-207ENST00000469334 ASIC2Q16515 512 aa9.71□□□□□ -0.85
SMARCE1-207ENST00000469334 KBTBD12Q3ZCT8 623 aa9.71□□□□□ -0.85
SMARCE1-207ENST00000469334 KIAA1755Q5JYT7 1200 aa9.71□□□□□ -0.85
SMARCE1-207ENST00000469334 FAM83BQ5T0W9 1011 aa9.71□□□□□ -0.85
SMARCE1-207ENST00000469334 CGB2Q6NT52 195 aa9.71□□□□□ -0.85
SMARCE1-207ENST00000469334 VSTM1Q6UX27 236 aa9.71□□□□□ -0.85
SMARCE1-207ENST00000469334 ZDHHC24Q6UX98 284 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms