RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 DNAJB1P25685 340 aa24.46■■□□□ 1.51
TTC28-204ENST00000468807 DNM2P50570 870 aa24.46■■□□□ 1.51
TTC28-204ENST00000468807 NEK4P51957 841 aa24.46■■□□□ 1.51
TTC28-204ENST00000468807 FOSBP53539 338 aa24.46■■□□□ 1.51
TTC28-204ENST00000468807 PSMC5P62195 406 aa24.46■■□□□ 1.51
TTC28-204ENST00000468807 DSC3Q14574 896 aa24.46■■□□□ 1.51
TTC28-204ENST00000468807 ME3Q16798 604 aa24.46■■□□□ 1.51
TTC28-204ENST00000468807 PLA2G4FQ68DD2 849 aa24.46■■□□□ 1.51
TTC28-204ENST00000468807 PPP4R3AQ6IN85 833 aa24.46■■□□□ 1.51
TTC28-204ENST00000468807 SPPL3Q8TCT6 385 aa24.46■■□□□ 1.51
TTC28-204ENST00000468807 POF1BQ8WVV4 589 aa24.46■■□□□ 1.51
TTC28-204ENST00000468807 GTF3C6Q969F1 213 aa24.46■■□□□ 1.51
TTC28-204ENST00000468807 BRMS1Q9HCU9 246 aa24.46■■□□□ 1.51
TTC28-204ENST00000468807 AAASQ9NRG9 546 aa24.46■■□□□ 1.51
TTC28-204ENST00000468807 PLXNA4Q9HCM2 1894 aa24.45■■□□□ 1.51
TTC28-204ENST00000468807 EML1O00423 815 aa24.45■■□□□ 1.5
TTC28-204ENST00000468807 EIF5BO60841 1220 aaKnown RBP24.45■■□□□ 1.5
TTC28-204ENST00000468807 DARSP14868 501 aaKnown RBP24.45■■□□□ 1.5
TTC28-204ENST00000468807 GTF2F1P35269 517 aaKnown RBP eCLIP24.45■■□□□ 1.5
TTC28-204ENST00000468807 KRT2P35908 639 aa24.45■■□□□ 1.5
TTC28-204ENST00000468807 CLUL1Q15846 466 aa24.45■■□□□ 1.5
TTC28-204ENST00000468807 PUS10Q3MIT2 529 aaKnown RBP24.45■■□□□ 1.5
TTC28-204ENST00000468807 PPP2R3CQ969Q6 453 aa24.45■■□□□ 1.5
TTC28-204ENST00000468807 FAM20AQ96MK3 541 aa24.45■■□□□ 1.5
TTC28-204ENST00000468807 NAP1L4Q99733 375 aaKnown RBP24.45■■□□□ 1.5
TTC28-204ENST00000468807 HCSTQ9UBK5 93 aa24.45■■□□□ 1.5
TTC28-204ENST00000468807 VAV3Q9UKW4 847 aa24.45■■□□□ 1.5
TTC28-204ENST00000468807 GRXCR2A6NFK2 248 aa24.44■■□□□ 1.5
TTC28-204ENST00000468807 CSDE1O75534 798 aaKnown RBP24.44■■□□□ 1.5
TTC28-204ENST00000468807 STBD1O95210 358 aa24.44■■□□□ 1.5
TTC28-204ENST00000468807 SSTR3P32745 418 aaPredicted RBP24.44■■□□□ 1.5
TTC28-204ENST00000468807 IRS1P35568 1242 aa24.44■■□□□ 1.5
TTC28-204ENST00000468807 QARSP47897 775 aaKnown RBP24.44■■□□□ 1.5
TTC28-204ENST00000468807 NR5A1Q13285 461 aa24.44■■□□□ 1.5
TTC28-204ENST00000468807 PPP2R5CQ13362 524 aa24.44■■□□□ 1.5
TTC28-204ENST00000468807 CAMK1Q14012 370 aa24.44■■□□□ 1.5
TTC28-204ENST00000468807 EARS2Q5JPH6 523 aaKnown RBP24.44■■□□□ 1.5
TTC28-204ENST00000468807 POTEDQ86YR6 584 aa24.44■■□□□ 1.5
TTC28-204ENST00000468807 ABI1Q8IZP0 508 aa24.44■■□□□ 1.5
TTC28-204ENST00000468807 GCOM2Q9BZD3 368 aaPredicted RBP24.44■■□□□ 1.5
TTC28-204ENST00000468807 ELAC1Q9H777 363 aaKnown RBP24.44■■□□□ 1.5
TTC28-204ENST00000468807 KCNMB3Q9NPA1 279 aa24.44■■□□□ 1.5
TTC28-204ENST00000468807 TYW1Q9NV66 732 aaKnown RBP24.44■■□□□ 1.5
TTC28-204ENST00000468807 C5orf42Q9H799 3197 aa24.44■■□□□ 1.5
TTC28-204ENST00000468807 FAM205CA6NFA0 338 aa24.43■■□□□ 1.5
TTC28-204ENST00000468807 FDPSP14324 419 aaKnown RBP24.43■■□□□ 1.5
TTC28-204ENST00000468807 FAM189BP81408 668 aa24.43■■□□□ 1.5
TTC28-204ENST00000468807 NCAPH2Q6IBW4 605 aa24.43■■□□□ 1.5
TTC28-204ENST00000468807 ANO5Q75V66 913 aa24.43■■□□□ 1.5
TTC28-204ENST00000468807 RHPN2Q8IUC4 686 aa24.43■■□□□ 1.5
TTC28-204ENST00000468807 THNSL1Q8IYQ7 743 aa24.43■■□□□ 1.5
TTC28-204ENST00000468807 MICAL1Q8TDZ2 1067 aa24.43■■□□□ 1.5
TTC28-204ENST00000468807 SUCLA2Q9P2R7 463 aaPredicted RBP24.43■■□□□ 1.5
TTC28-204ENST00000468807 FAM50BQ9Y247 325 aa24.43■■□□□ 1.5
TTC28-204ENST00000468807 A0A087WZ62 844 aa24.42■■□□□ 1.5
TTC28-204ENST00000468807 HOXA2O43364 376 aa24.42■■□□□ 1.5
TTC28-204ENST00000468807 DKC1O60832 514 aaKnown RBP eCLIP24.42■■□□□ 1.5
TTC28-204ENST00000468807 TRIM29Q14134 588 aa24.42■■□□□ 1.5
TTC28-204ENST00000468807 COL19A1Q14993 1142 aa24.42■■□□□ 1.5
TTC28-204ENST00000468807 ECHDC2Q86YB7 292 aa24.42■■□□□ 1.5
TTC28-204ENST00000468807 FAM178BQ8IXR5 827 aa24.42■■□□□ 1.5
TTC28-204ENST00000468807 NLRP4Q96MN2 994 aa24.42■■□□□ 1.5
TTC28-204ENST00000468807 CEP89Q96ST8 783 aa24.42■■□□□ 1.5
TTC28-204ENST00000468807 FDXACB1Q9BRP7 624 aaPredicted RBP24.42■■□□□ 1.5
TTC28-204ENST00000468807 C1QTNF1Q9BXJ1 281 aa24.42■■□□□ 1.5
TTC28-204ENST00000468807 EPHX3Q9H6B9 360 aa24.42■■□□□ 1.5
TTC28-204ENST00000468807 CD320Q9NPF0 282 aa24.42■■□□□ 1.5
TTC28-204ENST00000468807 TBX3O15119 743 aa24.41■■□□□ 1.5
TTC28-204ENST00000468807 LINC01565O15544 149 aa24.41■■□□□ 1.5
TTC28-204ENST00000468807 JAK2O60674 1132 aa24.41■■□□□ 1.5
TTC28-204ENST00000468807 BAG4O95429 457 aaKnown RBP24.41■■□□□ 1.5
TTC28-204ENST00000468807 SEC24BO95487 1268 aa24.41■■□□□ 1.5
TTC28-204ENST00000468807 CENPBP07199 599 aaPredicted RBP24.41■■□□□ 1.5
TTC28-204ENST00000468807 COL9A1P20849 921 aa24.41■■□□□ 1.5
TTC28-204ENST00000468807 LTBRP36941 435 aa24.41■■□□□ 1.5
TTC28-204ENST00000468807 NDUFV1P49821 464 aa24.41■■□□□ 1.5
TTC28-204ENST00000468807 NPEPPSP55786 919 aa24.41■■□□□ 1.5
TTC28-204ENST00000468807 CDC42EP1Q00587 391 aa24.41■■□□□ 1.5
TTC28-204ENST00000468807 DLX2Q07687 328 aaPredicted RBP24.41■■□□□ 1.5
TTC28-204ENST00000468807 ADGRD2Q7Z7M1 963 aa24.41■■□□□ 1.5
TTC28-204ENST00000468807 RBM23Q86U06 439 aaKnown RBP24.41■■□□□ 1.5
TTC28-204ENST00000468807 GJD3Q8N144 294 aa24.41■■□□□ 1.5
TTC28-204ENST00000468807 COLGALT1Q8NBJ5 622 aa24.41■■□□□ 1.5
TTC28-204ENST00000468807 NSUN7Q8NE18 718 aaKnown RBP24.41■■□□□ 1.5
TTC28-204ENST00000468807 HAS1Q92839 578 aa24.41■■□□□ 1.5
TTC28-204ENST00000468807 CEP170P1Q96L14 293 aa24.41■■□□□ 1.5
TTC28-204ENST00000468807 JPH2Q9BR39 696 aaPredicted RBP24.41■■□□□ 1.5
TTC28-204ENST00000468807 TMEM117Q9H0C3 514 aa24.41■■□□□ 1.5
TTC28-204ENST00000468807 CYP26B1Q9NR63 512 aa24.41■■□□□ 1.5
TTC28-204ENST00000468807 PCDHGC5Q9Y5F6 944 aa24.41■■□□□ 1.5
TTC28-204ENST00000468807 IGKV6-21A0A0C4DH24 114 aa24.4■■□□□ 1.5
TTC28-204ENST00000468807 MAFO75444 373 aaPredicted RBP24.4■■□□□ 1.5
TTC28-204ENST00000468807 FGF18O76093 207 aa24.4■■□□□ 1.5
TTC28-204ENST00000468807 P4HBP07237 508 aaKnown RBP24.4■■□□□ 1.5
TTC28-204ENST00000468807 LAG3P18627 525 aa24.4■■□□□ 1.5
TTC28-204ENST00000468807 NRIP1P48552 1158 aa24.4■■□□□ 1.5
TTC28-204ENST00000468807 CTC1Q2NKJ3 1217 aa24.4■■□□□ 1.5
TTC28-204ENST00000468807 KSR1Q8IVT5 923 aa24.4■■□□□ 1.5
TTC28-204ENST00000468807 SLC7A3Q8WY07 619 aa24.4■■□□□ 1.5
TTC28-204ENST00000468807 KHSRPQ92945 711 aaKnown RBP eCLIP24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms