RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 PANK2Q9BZ23 570 aa12.51□□□□□ -0.41
MSH5-214ENST00000468602 CLSTN2Q9H4D0 955 aa12.51□□□□□ -0.41
MSH5-214ENST00000468602 PHLPP2Q6ZVD8 1323 aa12.51□□□□□ -0.41
MSH5-214ENST00000468602 TMEM150BA6NC51 233 aa12.5□□□□□ -0.41
MSH5-214ENST00000468602 PITPNM1O00562 1244 aa12.5□□□□□ -0.41
MSH5-214ENST00000468602 TREHO43280 583 aa12.5□□□□□ -0.41
MSH5-214ENST00000468602 KLRC4O43908 158 aa12.5□□□□□ -0.41
MSH5-214ENST00000468602 GAP43P17677 238 aa12.5□□□□□ -0.41
MSH5-214ENST00000468602 DNM2P50570 870 aa12.5□□□□□ -0.41
MSH5-214ENST00000468602 POLGP54098 1239 aaPredicted RBP12.5□□□□□ -0.41
MSH5-214ENST00000468602 POSTNQ15063 836 aa12.5□□□□□ -0.41
MSH5-214ENST00000468602 NFKBIBQ15653 356 aa12.5□□□□□ -0.41
MSH5-214ENST00000468602 UNC13DQ70J99 1090 aa12.5□□□□□ -0.41
MSH5-214ENST00000468602 ZNF410Q86VK4 478 aa12.5□□□□□ -0.41
MSH5-214ENST00000468602 GPBP1Q86WP2 473 aa12.5□□□□□ -0.41
MSH5-214ENST00000468602 DIS3LQ8TF46 1054 aaKnown RBP12.5□□□□□ -0.41
MSH5-214ENST00000468602 PAWRQ96IZ0 340 aaKnown RBP12.5□□□□□ -0.41
MSH5-214ENST00000468602 FIZ1Q96SL8 496 aa12.5□□□□□ -0.41
MSH5-214ENST00000468602 STRA6Q9BX79 667 aa12.5□□□□□ -0.41
MSH5-214ENST00000468602 SENP6Q9GZR1 1112 aaPredicted RBP12.5□□□□□ -0.41
MSH5-214ENST00000468602 COL4A3BPQ9Y5P4 624 aa12.5□□□□□ -0.41
MSH5-214ENST00000468602 MYH11P35749 1972 aa12.49□□□□□ -0.41
MSH5-214ENST00000468602 B4GALT4O60513 344 aa12.49□□□□□ -0.41
MSH5-214ENST00000468602 RHOBTB3O94955 611 aa12.49□□□□□ -0.41
MSH5-214ENST00000468602 PARNO95453 639 aaKnown RBP12.49□□□□□ -0.41
MSH5-214ENST00000468602 PLS3P13797 630 aa12.49□□□□□ -0.41
MSH5-214ENST00000468602 EN2P19622 333 aaPredicted RBP12.49□□□□□ -0.41
MSH5-214ENST00000468602 NAMPTP43490 491 aa12.49□□□□□ -0.41
MSH5-214ENST00000468602 PSMD2Q13200 908 aa12.49□□□□□ -0.41
MSH5-214ENST00000468602 PPP2R5AQ15172 486 aa12.49□□□□□ -0.41
MSH5-214ENST00000468602 PTGISQ16647 500 aa12.49□□□□□ -0.41
MSH5-214ENST00000468602 CDCA2Q69YH5 1023 aaPredicted RBP12.49□□□□□ -0.41
MSH5-214ENST00000468602 EFCAB12Q6NXP0 572 aa12.49□□□□□ -0.41
MSH5-214ENST00000468602 TRIML1Q8N9V2 468 aa12.49□□□□□ -0.41
MSH5-214ENST00000468602 CCDC43Q96MW1 224 aaKnown RBP12.49□□□□□ -0.41
MSH5-214ENST00000468602 PLIN2Q99541 437 aa12.49□□□□□ -0.41
MSH5-214ENST00000468602 REEP2Q9BRK0 252 aa12.49□□□□□ -0.41
MSH5-214ENST00000468602 LARSQ9P2J5 1176 aaKnown RBP12.49□□□□□ -0.41
MSH5-214ENST00000468602 H0YCG3 227 aa12.48□□□□□ -0.41
MSH5-214ENST00000468602 TLR3O15455 904 aaKnown RBP12.48□□□□□ -0.41
MSH5-214ENST00000468602 USO1O60763 962 aaKnown RBP12.48□□□□□ -0.41
MSH5-214ENST00000468602 HIP1RO75146 1068 aa12.48□□□□□ -0.41
MSH5-214ENST00000468602 GPR32O75388 356 aa12.48□□□□□ -0.41
MSH5-214ENST00000468602 MYCP01106 439 aaPredicted RBP12.48□□□□□ -0.41
MSH5-214ENST00000468602 CYP2C9P11712 490 aa12.48□□□□□ -0.41
MSH5-214ENST00000468602 NCKAP1LP55160 1127 aa12.48□□□□□ -0.41
MSH5-214ENST00000468602 MGAT3Q09327 533 aa12.48□□□□□ -0.41
MSH5-214ENST00000468602 FAAP100Q0VG06 881 aa12.48□□□□□ -0.41
MSH5-214ENST00000468602 ALCAMQ13740 583 aa12.48□□□□□ -0.41
MSH5-214ENST00000468602 ZRSR1Q15695 479 aaKnown RBP12.48□□□□□ -0.41
MSH5-214ENST00000468602 FAM187BQ17R55 369 aa12.48□□□□□ -0.41
MSH5-214ENST00000468602 FOXR2Q6PJQ5 311 aa12.48□□□□□ -0.41
MSH5-214ENST00000468602 TRAF7Q6Q0C0 670 aa12.48□□□□□ -0.41
MSH5-214ENST00000468602 RSPH3Q86UC2 560 aa12.48□□□□□ -0.41
MSH5-214ENST00000468602 TMEM174Q8WUU8 243 aa12.48□□□□□ -0.41
MSH5-214ENST00000468602 TRAPPC12Q8WVT3 735 aa12.48□□□□□ -0.41
MSH5-214ENST00000468602 PSPC1Q8WXF1 523 aaKnown RBP12.48□□□□□ -0.41
MSH5-214ENST00000468602 DHX38Q92620 1227 aaKnown RBP12.48□□□□□ -0.41
MSH5-214ENST00000468602 MAP7D2Q96T17 732 aa12.48□□□□□ -0.41
MSH5-214ENST00000468602 ADAMTS10Q9H324 1103 aa12.48□□□□□ -0.41
MSH5-214ENST00000468602 PARVGQ9HBI0 331 aa12.48□□□□□ -0.41
MSH5-214ENST00000468602 KIAA1468Q9P260 1216 aa12.48□□□□□ -0.41
MSH5-214ENST00000468602 ARHGAP28Q9P2N2 729 aa12.48□□□□□ -0.41
MSH5-214ENST00000468602 TBX21Q9UL17 535 aa12.48□□□□□ -0.41
MSH5-214ENST00000468602 A0A087WWV3 80 aa12.47□□□□□ -0.41
MSH5-214ENST00000468602 DCDC2CA8MYV0 355 aa12.47□□□□□ -0.41
MSH5-214ENST00000468602 KIAA0355O15063 1070 aa12.47□□□□□ -0.41
MSH5-214ENST00000468602 PPP1R37O75864 691 aa12.47□□□□□ -0.41
MSH5-214ENST00000468602 SMC2O95347 1197 aa12.47□□□□□ -0.41
MSH5-214ENST00000468602 GLRA2P23416 452 aa12.47□□□□□ -0.41
MSH5-214ENST00000468602 GPC3P51654 580 aa12.47□□□□□ -0.41
MSH5-214ENST00000468602 ZNF200P98182 395 aaPredicted RBP12.47□□□□□ -0.41
MSH5-214ENST00000468602 LAMTOR4Q0VGL1 99 aa12.47□□□□□ -0.41
MSH5-214ENST00000468602 CUL4BQ13620 913 aa12.47□□□□□ -0.41
MSH5-214ENST00000468602 CT47A1Q5JQC4 288 aaPredicted RBP12.47□□□□□ -0.41
MSH5-214ENST00000468602 CCDC183Q5T5S1 534 aa12.47□□□□□ -0.41
MSH5-214ENST00000468602 SRGAP1Q7Z6B7 1085 aa12.47□□□□□ -0.41
MSH5-214ENST00000468602 CCDC65Q8IXS2 484 aa12.47□□□□□ -0.41
MSH5-214ENST00000468602 CCDC155Q8N6L0 562 aa12.47□□□□□ -0.41
MSH5-214ENST00000468602 USP38Q8NB14 1042 aa12.47□□□□□ -0.41
MSH5-214ENST00000468602 PRPF31Q8WWY3 499 aaKnown RBP12.47□□□□□ -0.41
MSH5-214ENST00000468602 SYAP1Q96A49 352 aaPredicted RBP12.47□□□□□ -0.41
MSH5-214ENST00000468602 VTI1AQ96AJ9 217 aa12.47□□□□□ -0.41
MSH5-214ENST00000468602 HVCN1Q96D96 273 aa12.47□□□□□ -0.41
MSH5-214ENST00000468602 NUP62CLQ9H1M0 184 aa12.47□□□□□ -0.41
MSH5-214ENST00000468602 TMEM134Q9H6X4 195 aa12.47□□□□□ -0.41
MSH5-214ENST00000468602 IFT122Q9HBG6 1241 aa12.47□□□□□ -0.41
MSH5-214ENST00000468602 TRMT13Q9NUP7 481 aaKnown RBP12.47□□□□□ -0.41
MSH5-214ENST00000468602 RMND1Q9NWS8 449 aa12.47□□□□□ -0.41
MSH5-214ENST00000468602 SUCLA2Q9P2R7 463 aaPredicted RBP12.47□□□□□ -0.41
MSH5-214ENST00000468602 EIF3DO15371 548 aaKnown RBP eCLIP12.46□□□□□ -0.41
MSH5-214ENST00000468602 LETM1O95202 739 aaPredicted RBP12.46□□□□□ -0.41
MSH5-214ENST00000468602 AFMP43652 599 aa12.46□□□□□ -0.41
MSH5-214ENST00000468602 FXR1P51114 621 aaKnown RBP eCLIP12.46□□□□□ -0.41
MSH5-214ENST00000468602 EFNA5P52803 228 aa12.46□□□□□ -0.41
MSH5-214ENST00000468602 CRYBB1P53674 252 aaPredicted RBP12.46□□□□□ -0.41
MSH5-214ENST00000468602 SMTNP53814 917 aa12.46□□□□□ -0.41
MSH5-214ENST00000468602 PTENP60484 403 aa12.46□□□□□ -0.41
MSH5-214ENST00000468602 GTF2BQ00403 316 aa12.46□□□□□ -0.41
MSH5-214ENST00000468602 TLE2Q04725 743 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms