RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 TMEM266Q2M3C6 531 aa16.19■□□□□ 0.18
COL27A1-203ENST00000468565 NCAPH2Q6IBW4 605 aa16.19■□□□□ 0.18
COL27A1-203ENST00000468565 ANO5Q75V66 913 aa16.19■□□□□ 0.18
COL27A1-203ENST00000468565 TMX1Q9H3N1 280 aa16.19■□□□□ 0.18
COL27A1-203ENST00000468565 RC3H2Q9HBD1 1191 aaKnown RBP16.19■□□□□ 0.18
COL27A1-203ENST00000468565 PCDHA12Q9UN75 941 aa16.19■□□□□ 0.18
COL27A1-203ENST00000468565 SMC3Q9UQE7 1217 aa16.19■□□□□ 0.18
COL27A1-203ENST00000468565 WNT7AO00755 349 aa16.18■□□□□ 0.18
COL27A1-203ENST00000468565 MBD3O95983 291 aa16.18■□□□□ 0.18
COL27A1-203ENST00000468565 CDC42EP1Q00587 391 aa16.18■□□□□ 0.18
COL27A1-203ENST00000468565 NFX1Q12986 1120 aaKnown RBP16.18■□□□□ 0.18
COL27A1-203ENST00000468565 GRB10Q13322 594 aa16.18■□□□□ 0.18
COL27A1-203ENST00000468565 NPAS4Q8IUM7 802 aa16.18■□□□□ 0.18
COL27A1-203ENST00000468565 C4orf19Q8IY42 314 aa16.18■□□□□ 0.18
COL27A1-203ENST00000468565 CRIPAKQ8N1N5 446 aa16.18■□□□□ 0.18
COL27A1-203ENST00000468565 JPH2Q9BR39 696 aaPredicted RBP16.18■□□□□ 0.18
COL27A1-203ENST00000468565 LXNQ9BS40 222 aa16.18■□□□□ 0.18
COL27A1-203ENST00000468565 ADAMTS10Q9H324 1103 aa16.18■□□□□ 0.18
COL27A1-203ENST00000468565 SUGCTQ9HAC7 445 aa16.18■□□□□ 0.18
COL27A1-203ENST00000468565 LMCD1Q9NZU5 365 aa16.18■□□□□ 0.18
COL27A1-203ENST00000468565 ST3GAL5Q9UNP4 418 aa16.18■□□□□ 0.18
COL27A1-203ENST00000468565 MTCH2Q9Y6C9 303 aa16.18■□□□□ 0.18
COL27A1-203ENST00000468565 TMEM150BA6NC51 233 aa16.17■□□□□ 0.18
COL27A1-203ENST00000468565 LPXNO60711 386 aa16.17■□□□□ 0.18
COL27A1-203ENST00000468565 MAFO75444 373 aaPredicted RBP16.17■□□□□ 0.18
COL27A1-203ENST00000468565 STAG3L1P0CL83 205 aa16.17■□□□□ 0.18
COL27A1-203ENST00000468565 GPC3P51654 580 aa16.17■□□□□ 0.18
COL27A1-203ENST00000468565 NLRP11P59045 1033 aaKnown RBP16.17■□□□□ 0.18
COL27A1-203ENST00000468565 FAM228AQ86W67 206 aa16.17■□□□□ 0.18
COL27A1-203ENST00000468565 ZNF689Q96CS4 500 aaPredicted RBP16.17■□□□□ 0.18
COL27A1-203ENST00000468565 MTMR9Q96QG7 549 aa16.17■□□□□ 0.18
COL27A1-203ENST00000468565 PPP1R16BQ96T49 567 aa16.17■□□□□ 0.18
COL27A1-203ENST00000468565 CYP26B1Q9NR63 512 aa16.17■□□□□ 0.18
COL27A1-203ENST00000468565 C1orf112Q9NSG2 853 aa16.17■□□□□ 0.18
COL27A1-203ENST00000468565 KIF3AQ9Y496 699 aa16.17■□□□□ 0.18
COL27A1-203ENST00000468565 ADGRA3Q8IWK6 1321 aa16.17■□□□□ 0.18
COL27A1-203ENST00000468565 DGKIO75912 1065 aa16.17■□□□□ 0.18
COL27A1-203ENST00000468565 ZNF445P59923 1031 aa16.17■□□□□ 0.18
COL27A1-203ENST00000468565 CAVIN1Q6NZI2 390 aaKnown RBP16.17■□□□□ 0.18
COL27A1-203ENST00000468565 EXOC8Q8IYI6 725 aa16.17■□□□□ 0.18
COL27A1-203ENST00000468565 NEK9Q8TD19 979 aa16.17■□□□□ 0.18
COL27A1-203ENST00000468565 C17orf80Q9BSJ5 609 aa16.17■□□□□ 0.18
COL27A1-203ENST00000468565 ZSWIM4Q9H7M6 989 aa16.17■□□□□ 0.18
COL27A1-203ENST00000468565 TTC12Q9H892 705 aaPredicted RBP16.17■□□□□ 0.18
COL27A1-203ENST00000468565 WRAP73Q9P2S5 460 aaPredicted RBP16.17■□□□□ 0.18
COL27A1-203ENST00000468565 ATG2AQ2TAZ0 1938 aa16.16■□□□□ 0.18
COL27A1-203ENST00000468565 EIF4BP23588 611 aaKnown RBP16.16■□□□□ 0.18
COL27A1-203ENST00000468565 TRAPPC10P48553 1259 aa16.16■□□□□ 0.18
COL27A1-203ENST00000468565 SARSP49591 514 aaKnown RBP16.16■□□□□ 0.18
COL27A1-203ENST00000468565 DNM2P50570 870 aa16.16■□□□□ 0.18
COL27A1-203ENST00000468565 PLA2G4FQ68DD2 849 aa16.16■□□□□ 0.18
COL27A1-203ENST00000468565 GAS2L3Q86XJ1 694 aa16.16■□□□□ 0.18
COL27A1-203ENST00000468565 NOSTRINQ8IVI9 506 aa16.16■□□□□ 0.18
COL27A1-203ENST00000468565 FIBCD1Q8N539 461 aa16.16■□□□□ 0.18
COL27A1-203ENST00000468565 FBXO22Q8NEZ5 403 aa16.16■□□□□ 0.18
COL27A1-203ENST00000468565 DYDC2Q96IM9 177 aa16.16■□□□□ 0.18
COL27A1-203ENST00000468565 SH2D3AQ9BRG2 576 aa16.16■□□□□ 0.18
COL27A1-203ENST00000468565 RGS18Q9NS28 235 aa16.16■□□□□ 0.18
COL27A1-203ENST00000468565 RGL1Q9NZL6 768 aa16.16■□□□□ 0.18
COL27A1-203ENST00000468565 MTUS1Q9ULD2 1270 aa16.16■□□□□ 0.18
COL27A1-203ENST00000468565 YWHABP31946 246 aaKnown RBP16.15■□□□□ 0.18
COL27A1-203ENST00000468565 TXKP42681 527 aa16.15■□□□□ 0.18
COL27A1-203ENST00000468565 DRP2Q13474 957 aa16.15■□□□□ 0.18
COL27A1-203ENST00000468565 GNL2Q13823 731 aaKnown RBP16.15■□□□□ 0.18
COL27A1-203ENST00000468565 OTUD6AQ7L8S5 288 aa16.15■□□□□ 0.18
COL27A1-203ENST00000468565 GDPD5Q8WTR4 605 aa16.15■□□□□ 0.18
COL27A1-203ENST00000468565 PPM1EQ8WY54 764 aa16.15■□□□□ 0.18
COL27A1-203ENST00000468565 EIF2AK1Q9BQI3 630 aaKnown RBP16.15■□□□□ 0.18
COL27A1-203ENST00000468565 PANK2Q9BZ23 570 aa16.15■□□□□ 0.18
COL27A1-203ENST00000468565 TMEM60Q9H2L4 133 aa16.15■□□□□ 0.18
COL27A1-203ENST00000468565 RWDD3Q9Y3V2 267 aa16.15■□□□□ 0.18
COL27A1-203ENST00000468565 DENND3A2RUS2 1198 aa16.15■□□□□ 0.18
COL27A1-203ENST00000468565 MGEA5O60502 916 aa16.15■□□□□ 0.18
COL27A1-203ENST00000468565 SLITRK3O94933 977 aa16.15■□□□□ 0.18
COL27A1-203ENST00000468565 LYPLA2O95372 231 aa16.15■□□□□ 0.18
COL27A1-203ENST00000468565 DARSP14868 501 aaKnown RBP16.15■□□□□ 0.18
COL27A1-203ENST00000468565 U2AF2P26368 475 aaKnown RBP eCLIP16.15■□□□□ 0.18
COL27A1-203ENST00000468565 MCM7P33993 719 aa16.15■□□□□ 0.18
COL27A1-203ENST00000468565 RFC5P40937 340 aa16.15■□□□□ 0.18
COL27A1-203ENST00000468565 CCDC85BQ15834 202 aaPredicted RBP16.15■□□□□ 0.18
COL27A1-203ENST00000468565 ZSCAN23Q3MJ62 389 aa16.15■□□□□ 0.18
COL27A1-203ENST00000468565 EPC2Q52LR7 807 aa16.15■□□□□ 0.18
COL27A1-203ENST00000468565 TMEM192Q8IY95 271 aa16.15■□□□□ 0.18
COL27A1-203ENST00000468565 CMTR2Q8IYT2 770 aaKnown RBP16.15■□□□□ 0.18
COL27A1-203ENST00000468565 CEP170P1Q96L14 293 aa16.15■□□□□ 0.18
COL27A1-203ENST00000468565 ADAM2Q99965 735 aa16.15■□□□□ 0.18
COL27A1-203ENST00000468565 HSD17B14Q9BPX1 270 aa16.15■□□□□ 0.18
COL27A1-203ENST00000468565 DHX33Q9H6R0 707 aaKnown RBP16.15■□□□□ 0.18
COL27A1-203ENST00000468565 NOL7Q9UMY1 257 aaKnown RBP16.15■□□□□ 0.18
COL27A1-203ENST00000468565 ZSCAN22P10073 491 aaPredicted RBP16.14■□□□□ 0.17
COL27A1-203ENST00000468565 ATP2B1P20020 1258 aa16.14■□□□□ 0.17
COL27A1-203ENST00000468565 NPEPPSP55786 919 aa16.14■□□□□ 0.17
COL27A1-203ENST00000468565 CYP4A11Q02928 519 aa16.14■□□□□ 0.17
COL27A1-203ENST00000468565 CTTNQ14247 550 aaKnown RBP16.14■□□□□ 0.17
COL27A1-203ENST00000468565 DSC3Q14574 896 aa16.14■□□□□ 0.17
COL27A1-203ENST00000468565 SLC24A5Q71RS6 500 aa16.14■□□□□ 0.17
COL27A1-203ENST00000468565 ZNF410Q86VK4 478 aa16.14■□□□□ 0.17
COL27A1-203ENST00000468565 GPT2Q8TD30 523 aa16.14■□□□□ 0.17
COL27A1-203ENST00000468565 NLRP7Q8WX94 980 aa16.14■□□□□ 0.17
COL27A1-203ENST00000468565 SLC7A3Q8WY07 619 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms