RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 MARSP56192 900 aaKnown RBP9.11□□□□□ -0.95
BRCA1-208ENST00000468300 SREBF2Q12772 1141 aa9.11□□□□□ -0.95
BRCA1-208ENST00000468300 MKRN4PQ13434 485 aaPredicted RBP9.11□□□□□ -0.95
BRCA1-208ENST00000468300 NOC3LQ8WTT2 800 aaKnown RBP9.11□□□□□ -0.95
BRCA1-208ENST00000468300 SCFD2Q8WU76 684 aa9.11□□□□□ -0.95
BRCA1-208ENST00000468300 TMEM174Q8WUU8 243 aa9.11□□□□□ -0.95
BRCA1-208ENST00000468300 CEP170P1Q96L14 293 aa9.11□□□□□ -0.95
BRCA1-208ENST00000468300 CNOT6LQ96LI5 555 aaKnown RBP9.11□□□□□ -0.95
BRCA1-208ENST00000468300 NTPCRQ9BSD7 190 aaKnown RBP9.11□□□□□ -0.95
BRCA1-208ENST00000468300 ECM2O94769 699 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-208ENST00000468300 FAM13AO94988 1023 aa9.1□□□□□ -0.95
BRCA1-208ENST00000468300 GCNT3O95395 438 aa9.1□□□□□ -0.95
BRCA1-208ENST00000468300 MAPTP10636 758 aaKnown RBP9.1□□□□□ -0.95
BRCA1-208ENST00000468300 STAT5BP51692 787 aa9.1□□□□□ -0.95
BRCA1-208ENST00000468300 GTF2BQ00403 316 aa9.1□□□□□ -0.95
BRCA1-208ENST00000468300 GOLGA8FQ08AF8 430 aa9.1□□□□□ -0.95
BRCA1-208ENST00000468300 GOLGA8DPQ0D2H9 430 aa9.1□□□□□ -0.95
BRCA1-208ENST00000468300 EDRF1Q3B7T1 1238 aa9.1□□□□□ -0.95
BRCA1-208ENST00000468300 PRAMEF19Q5SWL8 479 aa9.1□□□□□ -0.95
BRCA1-208ENST00000468300 ODR4Q5SWX8 454 aa9.1□□□□□ -0.95
BRCA1-208ENST00000468300 TAS1R3Q7RTX0 852 aa9.1□□□□□ -0.95
BRCA1-208ENST00000468300 PLPPR4Q7Z2D5 763 aa9.1□□□□□ -0.95
BRCA1-208ENST00000468300 TMC6Q7Z403 805 aa9.1□□□□□ -0.95
BRCA1-208ENST00000468300 DPP9Q86TI2 863 aa9.1□□□□□ -0.95
BRCA1-208ENST00000468300 TMEM139Q8IV31 216 aa9.1□□□□□ -0.95
BRCA1-208ENST00000468300 LRRC8AQ8IWT6 810 aa9.1□□□□□ -0.95
BRCA1-208ENST00000468300 SPATA33Q96N06 139 aa9.1□□□□□ -0.95
BRCA1-208ENST00000468300 TIPINQ9BVW5 301 aa9.1□□□□□ -0.95
BRCA1-208ENST00000468300 VPS16Q9H269 839 aa9.1□□□□□ -0.95
BRCA1-208ENST00000468300 DMAC2Q9NW81 257 aa9.1□□□□□ -0.95
BRCA1-208ENST00000468300 IMPACTQ9P2X3 320 aa9.1□□□□□ -0.95
BRCA1-208ENST00000468300 SEPT9Q9UHD8 586 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-208ENST00000468300 IVNS1ABPQ9Y6Y0 642 aa9.1□□□□□ -0.95
BRCA1-208ENST00000468300 PDXKO00764 312 aa9.1□□□□□ -0.95
BRCA1-208ENST00000468300 CCZ1BP86790 482 aa9.1□□□□□ -0.95
BRCA1-208ENST00000468300 CCZ1P86791 482 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-208ENST00000468300 ACVR2BQ13705 512 aa9.1□□□□□ -0.95
BRCA1-208ENST00000468300 TTLL4Q14679 1199 aa9.1□□□□□ -0.95
BRCA1-208ENST00000468300 PLCB4Q15147 1175 aa9.1□□□□□ -0.95
BRCA1-208ENST00000468300 NFIL3Q16649 462 aa9.1□□□□□ -0.95
BRCA1-208ENST00000468300 MSL3Q8N5Y2 521 aaKnown RBP9.1□□□□□ -0.95
BRCA1-208ENST00000468300 ZNF784Q8NCA9 323 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-208ENST00000468300 TMEM161BQ8NDZ6 487 aa9.1□□□□□ -0.95
BRCA1-208ENST00000468300 MPHOSPH6Q99547 160 aaKnown RBP9.1□□□□□ -0.95
BRCA1-208ENST00000468300 C16orf70Q9BSU1 422 aa9.1□□□□□ -0.95
BRCA1-208ENST00000468300 TMX1Q9H3N1 280 aa9.1□□□□□ -0.95
BRCA1-208ENST00000468300 MLXIPQ9HAP2 919 aa9.1□□□□□ -0.95
BRCA1-208ENST00000468300 ZFYVE28Q9HCC9 887 aa9.1□□□□□ -0.95
BRCA1-208ENST00000468300 RRAGDQ9NQL2 400 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-208ENST00000468300 PYCARDQ9ULZ3 195 aa9.1□□□□□ -0.95
BRCA1-208ENST00000468300 GNEQ9Y223 722 aaKnown RBP9.1□□□□□ -0.95
BRCA1-208ENST00000468300 ZKSCAN5Q9Y2L8 839 aa9.1□□□□□ -0.95
BRCA1-208ENST00000468300 LGALS16A8MUM7 142 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 TISP43B9A030 160 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 CBFA2T2O43439 604 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 ARL2P36404 184 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 DRP2Q13474 957 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 DPY19L2P1Q6NXN4 242 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 OTUD6AQ7L8S5 288 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 FILIP1Q7Z7B0 1213 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 PPTC7Q8NI37 304 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 KCNN1Q92952 543 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 TUBGCP2Q9BSJ2 902 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 KIFC3Q9BVG8 833 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 RNPEPQ9H4A4 650 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 CREBZFQ9NS37 354 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 RPS6KL1Q9Y6S9 549 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 UBE4BO95155 1302 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 IGKV6-21A0A0C4DH24 114 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 ANKRD62A6NC57 917 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 DGAT1O75907 488 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 NPTX2P47972 431 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 MCCD1P59942 119 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-208ENST00000468300 IRX5P78411 483 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-208ENST00000468300 FKBP3Q00688 224 aaKnown RBP9.09□□□□□ -0.95
BRCA1-208ENST00000468300 MAP2K1Q02750 393 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-208ENST00000468300 DUSP28Q4G0W2 176 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 OLFML2BQ68BL8 750 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 FAM178BQ8IXR5 827 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 CTAGE1Q96RT6 745 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 SLC24A3Q9HC58 644 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 TYW1Q9NV66 732 aaKnown RBP9.09□□□□□ -0.95
BRCA1-208ENST00000468300 ITIH6Q6UXX5 1313 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 CASP8AP2Q9UKL3 1982 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 AKAP3O75969 853 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 EDN1P05305 212 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 SSR1P43307 286 aaKnown RBP9.09□□□□□ -0.95
BRCA1-208ENST00000468300 CASP4P49662 377 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 KLK7P49862 253 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 RTP1P59025 263 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 TPD52L1Q16890 204 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-208ENST00000468300 MTERF2Q49AM1 385 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 FAM102BQ5T8I3 360 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 SPECC1LQ69YQ0 1117 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 SLC39A4Q6P5W5 647 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 TC2NQ8N9U0 490 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 ZSWIM2Q8NEG5 633 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 TRPV1Q8NER1 839 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 ASAP3Q8TDY4 903 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 ZBTB10Q96DT7 871 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms