RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 PPP1R12BO60237 982 aaPredicted RBP12.49□□□□□ -0.41
HPS1-208ENST00000467246 C2orf54Q08AI8 447 aa12.49□□□□□ -0.41
HPS1-208ENST00000467246 R3HDM1Q15032 1099 aaKnown RBP12.49□□□□□ -0.41
HPS1-208ENST00000467246 NAB2Q15742 525 aa12.49□□□□□ -0.41
HPS1-208ENST00000467246 IQCEQ6IPM2 695 aa12.49□□□□□ -0.41
HPS1-208ENST00000467246 RNF10Q8N5U6 811 aaKnown RBP12.49□□□□□ -0.41
HPS1-208ENST00000467246 TRPM4Q8TD43 1214 aa12.49□□□□□ -0.41
HPS1-208ENST00000467246 MKNK1Q9BUB5 465 aa12.49□□□□□ -0.41
HPS1-208ENST00000467246 GPRC5CQ9NQ84 441 aa12.49□□□□□ -0.41
HPS1-208ENST00000467246 EHD2Q9NZN4 543 aa12.49□□□□□ -0.41
HPS1-208ENST00000467246 DBR1Q9UK59 544 aaKnown RBP12.49□□□□□ -0.41
HPS1-208ENST00000467246 FRMD4BQ9Y2L6 1034 aa12.49□□□□□ -0.41
HPS1-208ENST00000467246 LTBP3Q9NS15 1303 aa12.49□□□□□ -0.41
HPS1-208ENST00000467246 GTPBP10A4D1E9 387 aaKnown RBP12.48□□□□□ -0.41
HPS1-208ENST00000467246 EXOC3O60645 756 aa12.48□□□□□ -0.41
HPS1-208ENST00000467246 FMO5P49326 533 aa12.48□□□□□ -0.41
HPS1-208ENST00000467246 HNRNPH2P55795 449 aaKnown RBP12.48□□□□□ -0.41
HPS1-208ENST00000467246 JAM2P57087 298 aa12.48□□□□□ -0.41
HPS1-208ENST00000467246 GABPB1Q06547 395 aaPredicted RBP12.48□□□□□ -0.41
HPS1-208ENST00000467246 TXLNBQ8N3L3 684 aa12.48□□□□□ -0.41
HPS1-208ENST00000467246 RPGRIP1Q96KN7 1286 aa12.48□□□□□ -0.41
HPS1-208ENST00000467246 PCIF1Q9H4Z3 704 aa12.48□□□□□ -0.41
HPS1-208ENST00000467246 LARSQ9P2J5 1176 aaKnown RBP12.48□□□□□ -0.41
HPS1-208ENST00000467246 L1RE1Q9UN81 338 aa12.48□□□□□ -0.41
HPS1-208ENST00000467246 MAP2K7O14733 419 aa12.48□□□□□ -0.41
HPS1-208ENST00000467246 BACH1O14867 736 aa12.48□□□□□ -0.41
HPS1-208ENST00000467246 ERLIN1O75477 346 aa12.48□□□□□ -0.41
HPS1-208ENST00000467246 PALMO75781 387 aa12.48□□□□□ -0.41
HPS1-208ENST00000467246 ZMYND10O75800 440 aa12.48□□□□□ -0.41
HPS1-208ENST00000467246 PRLRP16471 622 aa12.48□□□□□ -0.41
HPS1-208ENST00000467246 GYS2P54840 703 aa12.48□□□□□ -0.41
HPS1-208ENST00000467246 NPEPPSP55786 919 aa12.48□□□□□ -0.41
HPS1-208ENST00000467246 SNRNP48Q6IEG0 339 aaKnown RBP12.48□□□□□ -0.41
HPS1-208ENST00000467246 REPS2Q8NFH8 660 aa12.48□□□□□ -0.41
HPS1-208ENST00000467246 UBXN6Q9BZV1 441 aa12.48□□□□□ -0.41
HPS1-208ENST00000467246 LUC7LQ9NQ29 371 aaKnown RBP12.48□□□□□ -0.41
HPS1-208ENST00000467246 FBXL5Q9UKA1 691 aa12.48□□□□□ -0.41
HPS1-208ENST00000467246 MYH11P35749 1972 aa12.48□□□□□ -0.41
HPS1-208ENST00000467246 LYPLA2O95372 231 aa12.47□□□□□ -0.41
HPS1-208ENST00000467246 SMC1AQ14683 1233 aaKnown RBP12.47□□□□□ -0.41
HPS1-208ENST00000467246 PLA2G4FQ68DD2 849 aa12.47□□□□□ -0.41
HPS1-208ENST00000467246 WDR93Q6P2C0 686 aa12.47□□□□□ -0.41
HPS1-208ENST00000467246 SAMD3Q8N6K7 520 aa12.47□□□□□ -0.41
HPS1-208ENST00000467246 HINFPQ9BQA5 517 aa12.47□□□□□ -0.41
HPS1-208ENST00000467246 AS3MTQ9HBK9 375 aa12.47□□□□□ -0.41
HPS1-208ENST00000467246 HYOU1Q9Y4L1 999 aa12.47□□□□□ -0.41
HPS1-208ENST00000467246 CD2APQ9Y5K6 639 aa12.47□□□□□ -0.41
HPS1-208ENST00000467246 GFPT2O94808 682 aa12.47□□□□□ -0.41
HPS1-208ENST00000467246 FTCDO95954 541 aa12.47□□□□□ -0.41
HPS1-208ENST00000467246 NR3C2P08235 984 aa12.47□□□□□ -0.41
HPS1-208ENST00000467246 PLS3P13797 630 aa12.47□□□□□ -0.41
HPS1-208ENST00000467246 PRKCIP41743 596 aa12.47□□□□□ -0.41
HPS1-208ENST00000467246 DNA2P51530 1060 aa12.47□□□□□ -0.41
HPS1-208ENST00000467246 DLG4P78352 724 aa12.47□□□□□ -0.41
HPS1-208ENST00000467246 PRKG1Q13976 671 aa12.47□□□□□ -0.41
HPS1-208ENST00000467246 VSIG10LQ86VR7 867 aa12.47□□□□□ -0.41
HPS1-208ENST00000467246 C4orf19Q8IY42 314 aa12.47□□□□□ -0.41
HPS1-208ENST00000467246 NLGN2Q8NFZ4 835 aa12.47□□□□□ -0.41
HPS1-208ENST00000467246 SGIP1Q9BQI5 828 aa12.47□□□□□ -0.41
HPS1-208ENST00000467246 NAGPAQ9UK23 515 aa12.47□□□□□ -0.41
HPS1-208ENST00000467246 ZNF214Q9UL59 606 aaPredicted RBP12.47□□□□□ -0.41
HPS1-208ENST00000467246 TELO2Q9Y4R8 837 aa12.47□□□□□ -0.41
HPS1-208ENST00000467246 BZW2Q9Y6E2 419 aaKnown RBP12.47□□□□□ -0.41
HPS1-208ENST00000467246 WDR64B1ANS9 1081 aa12.47□□□□□ -0.41
HPS1-208ENST00000467246 FDX1P10109 184 aa12.47□□□□□ -0.41
HPS1-208ENST00000467246 TCP1P17987 556 aaKnown RBP12.47□□□□□ -0.41
HPS1-208ENST00000467246 PEX3P56589 373 aa12.47□□□□□ -0.41
HPS1-208ENST00000467246 PSMC5P62195 406 aa12.47□□□□□ -0.41
HPS1-208ENST00000467246 TMEM132BQ14DG7 1078 aa12.47□□□□□ -0.41
HPS1-208ENST00000467246 SLC9A9Q8IVB4 645 aa12.47□□□□□ -0.41
HPS1-208ENST00000467246 ZSWIM2Q8NEG5 633 aa12.47□□□□□ -0.41
HPS1-208ENST00000467246 GOLGA5Q8TBA6 731 aa12.47□□□□□ -0.41
HPS1-208ENST00000467246 CCDC43Q96MW1 224 aaKnown RBP12.47□□□□□ -0.41
HPS1-208ENST00000467246 CBWD1Q9BRT8 395 aa12.47□□□□□ -0.41
HPS1-208ENST00000467246 GGA3Q9NZ52 723 aa12.47□□□□□ -0.41
HPS1-208ENST00000467246 SLC16A4O15374 487 aa12.46□□□□□ -0.41
HPS1-208ENST00000467246 DSG3P32926 999 aa12.46□□□□□ -0.41
HPS1-208ENST00000467246 MATR3P43243 847 aaKnown RBP eCLIP12.46□□□□□ -0.41
HPS1-208ENST00000467246 MRPS25P82663 173 aaKnown RBP12.46□□□□□ -0.41
HPS1-208ENST00000467246 BFSP1Q12934 665 aa12.46□□□□□ -0.41
HPS1-208ENST00000467246 XKR9Q5GH70 373 aa12.46□□□□□ -0.41
HPS1-208ENST00000467246 ALKBH5Q6P6C2 394 aaKnown RBP12.46□□□□□ -0.41
HPS1-208ENST00000467246 HAUS6Q7Z4H7 955 aa12.46□□□□□ -0.41
HPS1-208ENST00000467246 SPATA4Q8NEY3 305 aa12.46□□□□□ -0.41
HPS1-208ENST00000467246 MS4A14Q96JA4 679 aa12.46□□□□□ -0.41
HPS1-208ENST00000467246 TCEAL9Q9UHQ7 104 aa12.46□□□□□ -0.41
HPS1-208ENST00000467246 DNAJC12Q9UKB3 198 aa12.46□□□□□ -0.41
HPS1-208ENST00000467246 PACSIN2Q9UNF0 486 aaPredicted RBP12.46□□□□□ -0.41
HPS1-208ENST00000467246 TUBBP07437 444 aa12.46□□□□□ -0.42
HPS1-208ENST00000467246 HIRAP54198 1017 aaPredicted RBP12.46□□□□□ -0.42
HPS1-208ENST00000467246 PPP2R5AQ15172 486 aa12.46□□□□□ -0.42
HPS1-208ENST00000467246 DLK2Q6UY11 383 aa12.46□□□□□ -0.42
HPS1-208ENST00000467246 ANO5Q75V66 913 aa12.46□□□□□ -0.42
HPS1-208ENST00000467246 HDXQ7Z353 690 aa12.46□□□□□ -0.42
HPS1-208ENST00000467246 APOBEC3FQ8IUX4 373 aaKnown RBP12.46□□□□□ -0.42
HPS1-208ENST00000467246 KLRG1Q96E93 195 aa12.46□□□□□ -0.42
HPS1-208ENST00000467246 PNMA2Q9UL42 364 aa12.46□□□□□ -0.42
HPS1-208ENST00000467246 ADAMTS5Q9UNA0 930 aa12.46□□□□□ -0.42
HPS1-208ENST00000467246 PCDHGC5Q9Y5F6 944 aa12.46□□□□□ -0.42
HPS1-208ENST00000467246 DOCK1Q14185 1865 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms