RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 MAP2K1Q02750 393 aaPredicted RBP14.35□□□□□ -0.11
COL4A1-202ENST00000467182 ZNF484Q5JVG2 852 aa14.35□□□□□ -0.11
COL4A1-202ENST00000467182 LRRC55Q6ZSA7 311 aa14.35□□□□□ -0.11
COL4A1-202ENST00000467182 NELFCDQ8IXH7 590 aa14.35□□□□□ -0.11
COL4A1-202ENST00000467182 FAM178BQ8IXR5 827 aa14.35□□□□□ -0.11
COL4A1-202ENST00000467182 LINC01465Q8N7H1 131 aa14.35□□□□□ -0.11
COL4A1-202ENST00000467182 ASAP3Q8TDY4 903 aa14.35□□□□□ -0.11
COL4A1-202ENST00000467182 PXYLP1Q8TE99 480 aa14.35□□□□□ -0.11
COL4A1-202ENST00000467182 TRAPPC12Q8WVT3 735 aa14.35□□□□□ -0.11
COL4A1-202ENST00000467182 SPIRE2Q8WWL2 714 aa14.35□□□□□ -0.11
COL4A1-202ENST00000467182 KCNN1Q92952 543 aa14.35□□□□□ -0.11
COL4A1-202ENST00000467182 TMEM143Q96AN5 459 aa14.35□□□□□ -0.11
COL4A1-202ENST00000467182 PPP1R9BQ96SB3 815 aa14.35□□□□□ -0.11
COL4A1-202ENST00000467182 POLR3FQ9H1D9 316 aaPredicted RBP14.35□□□□□ -0.11
COL4A1-202ENST00000467182 TUT1Q9H6E5 874 aaKnown RBP14.35□□□□□ -0.11
COL4A1-202ENST00000467182 C17orf75Q9HAS0 396 aa14.35□□□□□ -0.11
COL4A1-202ENST00000467182 LARSQ9P2J5 1176 aaKnown RBP14.35□□□□□ -0.11
COL4A1-202ENST00000467182 TSKSQ9UJT2 592 aa14.35□□□□□ -0.11
COL4A1-202ENST00000467182 ADGRA3Q8IWK6 1321 aa14.35□□□□□ -0.11
COL4A1-202ENST00000467182 COL1A2P08123 1366 aa14.34□□□□□ -0.11
COL4A1-202ENST00000467182 FRMPD3Q5JV73 1810 aa14.34□□□□□ -0.11
COL4A1-202ENST00000467182 K7ENM7 598 aa14.34□□□□□ -0.11
COL4A1-202ENST00000467182 HAS3O00219 553 aa14.34□□□□□ -0.11
COL4A1-202ENST00000467182 TGFB1I1O43294 461 aa14.34□□□□□ -0.11
COL4A1-202ENST00000467182 KIF20AO95235 890 aa14.34□□□□□ -0.11
COL4A1-202ENST00000467182 C22orf31O95567 290 aa14.34□□□□□ -0.11
COL4A1-202ENST00000467182 HMGCRP04035 888 aa14.34□□□□□ -0.11
COL4A1-202ENST00000467182 PRKAR2AP13861 404 aaKnown RBP14.34□□□□□ -0.11
COL4A1-202ENST00000467182 INSRRP14616 1297 aa14.34□□□□□ -0.11
COL4A1-202ENST00000467182 GLRA2P23416 452 aa14.34□□□□□ -0.11
COL4A1-202ENST00000467182 NPTX2P47972 431 aa14.34□□□□□ -0.11
COL4A1-202ENST00000467182 PEX3P56589 373 aa14.34□□□□□ -0.11
COL4A1-202ENST00000467182 TPM4P67936 248 aa14.34□□□□□ -0.11
COL4A1-202ENST00000467182 GTF2BQ00403 316 aa14.34□□□□□ -0.11
COL4A1-202ENST00000467182 FANCCQ00597 558 aa14.34□□□□□ -0.11
COL4A1-202ENST00000467182 BEX3Q00994 111 aa14.34□□□□□ -0.11
COL4A1-202ENST00000467182 LRRC63Q05C16 580 aa14.34□□□□□ -0.11
COL4A1-202ENST00000467182 DRP2Q13474 957 aa14.34□□□□□ -0.11
COL4A1-202ENST00000467182 KNOP1Q1ED39 458 aaKnown RBP14.34□□□□□ -0.11
COL4A1-202ENST00000467182 HSP90AA4PQ58FG1 418 aa14.34□□□□□ -0.11
COL4A1-202ENST00000467182 KSR1Q8IVT5 923 aa14.34□□□□□ -0.11
COL4A1-202ENST00000467182 TMEM161BQ8NDZ6 487 aa14.34□□□□□ -0.11
COL4A1-202ENST00000467182 IKZF4Q9H2S9 585 aa14.34□□□□□ -0.11
COL4A1-202ENST00000467182 THAP9Q9H5L6 903 aa14.34□□□□□ -0.11
COL4A1-202ENST00000467182 WBP1LQ9NX94 342 aa14.34□□□□□ -0.11
COL4A1-202ENST00000467182 TRPC6Q9Y210 931 aa14.34□□□□□ -0.11
COL4A1-202ENST00000467182 TRAF3IP3Q9Y228 551 aa14.34□□□□□ -0.11
COL4A1-202ENST00000467182 ADAMTS4O75173 837 aa14.33□□□□□ -0.12
COL4A1-202ENST00000467182 CPT1AP50416 773 aa14.33□□□□□ -0.12
COL4A1-202ENST00000467182 PRMT2P55345 433 aa14.33□□□□□ -0.12
COL4A1-202ENST00000467182 TBC1D8BQ0IIM8 1120 aa14.33□□□□□ -0.12
COL4A1-202ENST00000467182 MARCH8Q5T0T0 291 aa14.33□□□□□ -0.12
COL4A1-202ENST00000467182 HAUS6Q7Z4H7 955 aa14.33□□□□□ -0.12
COL4A1-202ENST00000467182 CSGALNACT2Q8N6G5 542 aa14.33□□□□□ -0.12
COL4A1-202ENST00000467182 DNAJC5GQ8N7S2 189 aa14.33□□□□□ -0.12
COL4A1-202ENST00000467182 NOC3LQ8WTT2 800 aaKnown RBP14.33□□□□□ -0.12
COL4A1-202ENST00000467182 SLC7A3Q8WY07 619 aa14.33□□□□□ -0.12
COL4A1-202ENST00000467182 ZBTB10Q96DT7 871 aa14.33□□□□□ -0.12
COL4A1-202ENST00000467182 NAP1L5Q96NT1 182 aaPredicted RBP14.33□□□□□ -0.12
COL4A1-202ENST00000467182 KIFC3Q9BVG8 833 aa14.33□□□□□ -0.12
COL4A1-202ENST00000467182 SRRTQ9BXP5 876 aaKnown RBP14.33□□□□□ -0.12
COL4A1-202ENST00000467182 AP5M1Q9H0R1 490 aa14.33□□□□□ -0.12
COL4A1-202ENST00000467182 INTS13Q9NVM9 706 aa14.33□□□□□ -0.12
COL4A1-202ENST00000467182 LIMA1Q9UHB6 759 aaKnown RBP14.33□□□□□ -0.12
COL4A1-202ENST00000467182 ZNF215Q9UL58 517 aaPredicted RBP14.33□□□□□ -0.12
COL4A1-202ENST00000467182 LRRC10BA6NIK2 292 aa14.32□□□□□ -0.12
COL4A1-202ENST00000467182 PDXKO00764 312 aa14.32□□□□□ -0.12
COL4A1-202ENST00000467182 SLC16A4O15374 487 aa14.32□□□□□ -0.12
COL4A1-202ENST00000467182 GAS2O43903 313 aaKnown RBP14.32□□□□□ -0.12
COL4A1-202ENST00000467182 PLCB2Q00722 1185 aa14.32□□□□□ -0.12
COL4A1-202ENST00000467182 ALCAMQ13740 583 aa14.32□□□□□ -0.12
COL4A1-202ENST00000467182 NFIL3Q16649 462 aa14.32□□□□□ -0.12
COL4A1-202ENST00000467182 FSCN1Q16658 493 aaKnown RBP14.32□□□□□ -0.12
COL4A1-202ENST00000467182 EDRF1Q3B7T1 1238 aa14.32□□□□□ -0.12
COL4A1-202ENST00000467182 TCP11X2Q5H9J9 407 aa14.32□□□□□ -0.12
COL4A1-202ENST00000467182 IER5Q5VY09 327 aa14.32□□□□□ -0.12
COL4A1-202ENST00000467182 PPP4R3CPQ6ZMV5 832 aa14.32□□□□□ -0.12
COL4A1-202ENST00000467182 TAS1R3Q7RTX0 852 aa14.32□□□□□ -0.12
COL4A1-202ENST00000467182 SLC17A8Q8NDX2 589 aa14.32□□□□□ -0.12
COL4A1-202ENST00000467182 RAET1EQ8TD07 263 aa14.32□□□□□ -0.12
COL4A1-202ENST00000467182 MRFAP1L1Q96HT8 127 aa14.32□□□□□ -0.12
COL4A1-202ENST00000467182 TYW1Q9NV66 732 aaKnown RBP14.32□□□□□ -0.12
COL4A1-202ENST00000467182 ARHGAP28Q9P2N2 729 aa14.32□□□□□ -0.12
COL4A1-202ENST00000467182 PCDHB13Q9Y5F0 798 aa14.32□□□□□ -0.12
COL4A1-202ENST00000467182 KCNJ18B7U540 433 aa14.31□□□□□ -0.12
COL4A1-202ENST00000467182 MYL3P08590 195 aa14.31□□□□□ -0.12
COL4A1-202ENST00000467182 CDC25BP30305 580 aa14.31□□□□□ -0.12
COL4A1-202ENST00000467182 NAMPTP43490 491 aa14.31□□□□□ -0.12
COL4A1-202ENST00000467182 PSEN2P49810 448 aa14.31□□□□□ -0.12
COL4A1-202ENST00000467182 PURAQ00577 322 aaKnown RBP14.31□□□□□ -0.12
COL4A1-202ENST00000467182 CCDC173Q0VFZ6 552 aa14.31□□□□□ -0.12
COL4A1-202ENST00000467182 DMP1Q13316 513 aaPredicted RBP14.31□□□□□ -0.12
COL4A1-202ENST00000467182 CAPSQ13938 189 aa14.31□□□□□ -0.12
COL4A1-202ENST00000467182 KCNJ12Q14500 433 aa14.31□□□□□ -0.12
COL4A1-202ENST00000467182 HIC1Q14526 733 aa14.31□□□□□ -0.12
COL4A1-202ENST00000467182 MFSD10Q14728 455 aa14.31□□□□□ -0.12
COL4A1-202ENST00000467182 ARHGEF6Q15052 776 aa14.31□□□□□ -0.12
COL4A1-202ENST00000467182 GRIK4Q16099 956 aa14.31□□□□□ -0.12
COL4A1-202ENST00000467182 TPD52L1Q16890 204 aaPredicted RBP14.31□□□□□ -0.12
COL4A1-202ENST00000467182 CCSAPQ6IQ19 270 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms