RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 LY9Q9HBG7 655 aa6.49□□□□□ -1.37
CXXC4-202ENST00000466963 ARHGEF3Q9NR81 526 aa6.49□□□□□ -1.37
CXXC4-202ENST00000466963 ANGPTL2Q9UKU9 493 aa6.49□□□□□ -1.37
CXXC4-202ENST00000466963 HCFC2Q9Y5Z7 792 aa6.49□□□□□ -1.37
CXXC4-202ENST00000466963 ESYT2A0FGR8 921 aa6.49□□□□□ -1.37
CXXC4-202ENST00000466963 DHX16O60231 1041 aaKnown RBP6.49□□□□□ -1.37
CXXC4-202ENST00000466963 DNAJB1P25685 340 aa6.49□□□□□ -1.37
CXXC4-202ENST00000466963 MTMR1Q13613 665 aa6.49□□□□□ -1.37
CXXC4-202ENST00000466963 DCLRE1AQ6PJP8 1040 aa6.49□□□□□ -1.37
CXXC4-202ENST00000466963 CYFIP1Q7L576 1253 aa6.49□□□□□ -1.37
CXXC4-202ENST00000466963 MXRA8Q9BRK3 442 aa6.49□□□□□ -1.37
CXXC4-202ENST00000466963 TOMM22Q9NS69 142 aa6.49□□□□□ -1.37
CXXC4-202ENST00000466963 XYLBO75191 536 aa6.48□□□□□ -1.37
CXXC4-202ENST00000466963 CXCL14O95715 111 aa6.48□□□□□ -1.37
CXXC4-202ENST00000466963 PSAPP07602 524 aa6.48□□□□□ -1.37
CXXC4-202ENST00000466963 INSRRP14616 1297 aa6.48□□□□□ -1.37
CXXC4-202ENST00000466963 MRPS9P82933 396 aaKnown RBP6.48□□□□□ -1.37
CXXC4-202ENST00000466963 SPIRE1Q08AE8 756 aa6.48□□□□□ -1.37
CXXC4-202ENST00000466963 HDAC1Q13547 482 aaPredicted RBP6.48□□□□□ -1.37
CXXC4-202ENST00000466963 PLCB4Q15147 1175 aa6.48□□□□□ -1.37
CXXC4-202ENST00000466963 SEC23AQ15436 765 aa6.48□□□□□ -1.37
CXXC4-202ENST00000466963 CHST3Q7LGC8 479 aa6.48□□□□□ -1.37
CXXC4-202ENST00000466963 APBB1IPQ7Z5R6 666 aaPredicted RBP6.48□□□□□ -1.37
CXXC4-202ENST00000466963 RTN4RL1Q86UN2 441 aaPredicted RBP6.48□□□□□ -1.37
CXXC4-202ENST00000466963 CTCFLQ8NI51 663 aaPredicted RBP6.48□□□□□ -1.37
CXXC4-202ENST00000466963 DNAJB3Q8WWF6 145 aa6.48□□□□□ -1.37
CXXC4-202ENST00000466963 ADAM2Q99965 735 aa6.48□□□□□ -1.37
CXXC4-202ENST00000466963 GCOM2Q9BZD3 368 aaPredicted RBP6.48□□□□□ -1.37
CXXC4-202ENST00000466963 C1orf115Q9H7X2 142 aa6.48□□□□□ -1.37
CXXC4-202ENST00000466963 TBC1D17Q9HA65 648 aa6.48□□□□□ -1.37
CXXC4-202ENST00000466963 MRPL17Q9NRX2 175 aaKnown RBP6.48□□□□□ -1.37
CXXC4-202ENST00000466963 GDE1Q9NZC3 331 aa6.48□□□□□ -1.37
CXXC4-202ENST00000466963 KANSL1LA0AUZ9 987 aa6.48□□□□□ -1.37
CXXC4-202ENST00000466963 OPLAHO14841 1288 aa6.48□□□□□ -1.37
CXXC4-202ENST00000466963 CTSHP09668 335 aa6.48□□□□□ -1.37
CXXC4-202ENST00000466963 PMLP29590 882 aa6.48□□□□□ -1.37
CXXC4-202ENST00000466963 JAK3P52333 1124 aa6.48□□□□□ -1.37
CXXC4-202ENST00000466963 CTDSPL2Q05D32 466 aa6.48□□□□□ -1.37
CXXC4-202ENST00000466963 PTPAQ15257 358 aa6.48□□□□□ -1.37
CXXC4-202ENST00000466963 DGKKQ5KSL6 1271 aa6.48□□□□□ -1.37
CXXC4-202ENST00000466963 TMEM63BQ5T3F8 832 aa6.48□□□□□ -1.37
CXXC4-202ENST00000466963 SRGAP1Q7Z6B7 1085 aa6.48□□□□□ -1.37
CXXC4-202ENST00000466963 LINC01465Q8N7H1 131 aa6.48□□□□□ -1.37
CXXC4-202ENST00000466963 ENAHQ8N8S7 591 aaPredicted RBP6.48□□□□□ -1.37
CXXC4-202ENST00000466963 LSM14AQ8ND56 463 aaKnown RBP6.48□□□□□ -1.37
CXXC4-202ENST00000466963 BICD2Q8TD16 824 aa6.48□□□□□ -1.37
CXXC4-202ENST00000466963 PHKBQ93100 1093 aa6.48□□□□□ -1.37
CXXC4-202ENST00000466963 IGSF21Q96ID5 467 aa6.48□□□□□ -1.37
CXXC4-202ENST00000466963 TYW1Q9NV66 732 aaKnown RBP6.48□□□□□ -1.37
CXXC4-202ENST00000466963 ANKFY1Q9P2R3 1169 aa6.48□□□□□ -1.37
CXXC4-202ENST00000466963 MAD2L2Q9UI95 211 aa6.48□□□□□ -1.37
CXXC4-202ENST00000466963 MIA3Q5JRA6 1907 aa6.48□□□□□ -1.37
CXXC4-202ENST00000466963 UPK3BL1B0FP48 263 aa6.47□□□□□ -1.37
CXXC4-202ENST00000466963 UPK3BL2E5RIL1 263 aa6.47□□□□□ -1.37
CXXC4-202ENST00000466963 LILRB3O75022 631 aa6.47□□□□□ -1.37
CXXC4-202ENST00000466963 SOD2P04179 222 aa6.47□□□□□ -1.37
CXXC4-202ENST00000466963 URODP06132 367 aa6.47□□□□□ -1.37
CXXC4-202ENST00000466963 RLBP1P12271 317 aa6.47□□□□□ -1.37
CXXC4-202ENST00000466963 ZNF76P36508 570 aa6.47□□□□□ -1.37
CXXC4-202ENST00000466963 ZNF200P98182 395 aaPredicted RBP6.47□□□□□ -1.37
CXXC4-202ENST00000466963 HIC1Q14526 733 aa6.47□□□□□ -1.37
CXXC4-202ENST00000466963 COLEC11Q9BWP8 271 aa6.47□□□□□ -1.37
CXXC4-202ENST00000466963 TMX1Q9H3N1 280 aa6.47□□□□□ -1.37
CXXC4-202ENST00000466963 C8orf33Q9H7E9 229 aaPredicted RBP6.47□□□□□ -1.37
CXXC4-202ENST00000466963 ST3GAL5Q9UNP4 418 aa6.47□□□□□ -1.37
CXXC4-202ENST00000466963 MAFBQ9Y5Q3 323 aaPredicted RBP6.47□□□□□ -1.37
CXXC4-202ENST00000466963 E9PAM4 449 aa6.47□□□□□ -1.37
CXXC4-202ENST00000466963 FOXP2O15409 715 aa6.47□□□□□ -1.37
CXXC4-202ENST00000466963 EIF4BP23588 611 aaKnown RBP6.47□□□□□ -1.37
CXXC4-202ENST00000466963 RDXP35241 583 aaKnown RBP6.47□□□□□ -1.37
CXXC4-202ENST00000466963 ATXN1P54253 815 aaKnown RBP6.47□□□□□ -1.37
CXXC4-202ENST00000466963 ERVFC1P60507 584 aa6.47□□□□□ -1.37
CXXC4-202ENST00000466963 SP2Q02086 613 aa6.47□□□□□ -1.37
CXXC4-202ENST00000466963 NCBP1Q09161 790 aaKnown RBP6.47□□□□□ -1.37
CXXC4-202ENST00000466963 SEMA3FQ13275 785 aa6.47□□□□□ -1.37
CXXC4-202ENST00000466963 KARSQ15046 597 aaKnown RBP6.47□□□□□ -1.37
CXXC4-202ENST00000466963 MLF2Q15773 248 aaPredicted RBP6.47□□□□□ -1.37
CXXC4-202ENST00000466963 MOXD1Q6UVY6 613 aa6.47□□□□□ -1.37
CXXC4-202ENST00000466963 DEPDC1BQ8WUY9 529 aa6.47□□□□□ -1.37
CXXC4-202ENST00000466963 TSPAN18Q96SJ8 248 aa6.47□□□□□ -1.37
CXXC4-202ENST00000466963 PI4K2AQ9BTU6 479 aa6.47□□□□□ -1.37
CXXC4-202ENST00000466963 KCNK12Q9HB15 430 aa6.47□□□□□ -1.37
CXXC4-202ENST00000466963 OBP2AQ9NY56 170 aa6.47□□□□□ -1.37
CXXC4-202ENST00000466963 H0Y626 953 aa6.47□□□□□ -1.37
CXXC4-202ENST00000466963 TRIM16O95361 564 aa6.47□□□□□ -1.37
CXXC4-202ENST00000466963 GLUD1P00367 558 aa6.47□□□□□ -1.37
CXXC4-202ENST00000466963 LIFRP42702 1097 aa6.47□□□□□ -1.37
CXXC4-202ENST00000466963 CLCN4P51793 760 aa6.47□□□□□ -1.37
CXXC4-202ENST00000466963 CLUL1Q15846 466 aa6.47□□□□□ -1.37
CXXC4-202ENST00000466963 UTP14CQ5TAP6 766 aaKnown RBP6.47□□□□□ -1.37
CXXC4-202ENST00000466963 PLPP4Q5VZY2 271 aa6.47□□□□□ -1.37
CXXC4-202ENST00000466963 RNF168Q8IYW5 571 aaPredicted RBP6.47□□□□□ -1.37
CXXC4-202ENST00000466963 RIT2Q99578 217 aa6.47□□□□□ -1.37
CXXC4-202ENST00000466963 AGO3Q9H9G7 860 aaKnown RBP6.47□□□□□ -1.37
CXXC4-202ENST00000466963 FAM86C1Q9NVL1 165 aa6.47□□□□□ -1.37
CXXC4-202ENST00000466963 SMG5Q9UPR3 1016 aaKnown RBP6.47□□□□□ -1.37
CXXC4-202ENST00000466963 MTCL1Q9Y4B5 1905 aaKnown RBP6.46□□□□□ -1.37
CXXC4-202ENST00000466963 MED19A0JLT2 244 aaPredicted RBP6.46□□□□□ -1.37
CXXC4-202ENST00000466963 IPO5O00410 1097 aaKnown RBP6.46□□□□□ -1.37
CXXC4-202ENST00000466963 ZNF197O14709 1029 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms