RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 RASSF8Q8NHQ8 419 aa11.07□□□□□ -0.64
PMF1-204ENST00000466489 CAGE1Q8TC20 777 aa11.07□□□□□ -0.64
PMF1-204ENST00000466489 ZNF592Q92610 1267 aa11.07□□□□□ -0.64
PMF1-204ENST00000466489 CDK5RAP3Q96JB5 506 aa11.07□□□□□ -0.64
PMF1-204ENST00000466489 AK8Q96MA6 479 aa11.07□□□□□ -0.64
PMF1-204ENST00000466489 PANX2Q96RD6 677 aa11.07□□□□□ -0.64
PMF1-204ENST00000466489 JPH2Q9BR39 696 aaPredicted RBP11.07□□□□□ -0.64
PMF1-204ENST00000466489 LXNQ9BS40 222 aa11.07□□□□□ -0.64
PMF1-204ENST00000466489 TUFT1Q9NNX1 390 aa11.07□□□□□ -0.64
PMF1-204ENST00000466489 IFNKQ9P0W0 207 aa11.07□□□□□ -0.64
PMF1-204ENST00000466489 SEPT9Q9UHD8 586 aaPredicted RBP11.07□□□□□ -0.64
PMF1-204ENST00000466489 DNAI1Q9UI46 699 aa11.07□□□□□ -0.64
PMF1-204ENST00000466489 PPME1Q9Y570 386 aa11.07□□□□□ -0.64
PMF1-204ENST00000466489 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.07□□□□□ -0.64
PMF1-204ENST00000466489 SRPRBQ9Y5M8 271 aaKnown RBP11.07□□□□□ -0.64
PMF1-204ENST00000466489 GRIN2DO15399 1336 aa11.07□□□□□ -0.64
PMF1-204ENST00000466489 KDM3AQ9Y4C1 1321 aa11.07□□□□□ -0.64
PMF1-204ENST00000466489 EVPLQ92817 2033 aa11.06□□□□□ -0.64
PMF1-204ENST00000466489 VWA3AA6NCI4 1184 aa11.06□□□□□ -0.64
PMF1-204ENST00000466489 POTEMA6NI47 508 aa11.06□□□□□ -0.64
PMF1-204ENST00000466489 MAGEB2O15479 319 aa11.06□□□□□ -0.64
PMF1-204ENST00000466489 B4GALT4O60513 344 aa11.06□□□□□ -0.64
PMF1-204ENST00000466489 INSRRP14616 1297 aa11.06□□□□□ -0.64
PMF1-204ENST00000466489 MUTP22033 750 aa11.06□□□□□ -0.64
PMF1-204ENST00000466489 TMOD1P28289 359 aa11.06□□□□□ -0.64
PMF1-204ENST00000466489 IGBP1P78318 339 aa11.06□□□□□ -0.64
PMF1-204ENST00000466489 CCZ1BP86790 482 aa11.06□□□□□ -0.64
PMF1-204ENST00000466489 CCZ1P86791 482 aaPredicted RBP11.06□□□□□ -0.64
PMF1-204ENST00000466489 NCBP1Q09161 790 aaKnown RBP11.06□□□□□ -0.64
PMF1-204ENST00000466489 PTK7Q13308 1070 aa11.06□□□□□ -0.64
PMF1-204ENST00000466489 TSR1Q2NL82 804 aaKnown RBP11.06□□□□□ -0.64
PMF1-204ENST00000466489 TPRNQ4KMQ1 711 aa11.06□□□□□ -0.64
PMF1-204ENST00000466489 GDF6Q6KF10 455 aaPredicted RBP11.06□□□□□ -0.64
PMF1-204ENST00000466489 PPFIBP1Q86W92 1011 aa11.06□□□□□ -0.64
PMF1-204ENST00000466489 CNGA4Q8IV77 575 aa11.06□□□□□ -0.64
PMF1-204ENST00000466489 TPH2Q8IWU9 490 aa11.06□□□□□ -0.64
PMF1-204ENST00000466489 TXLNBQ8N3L3 684 aa11.06□□□□□ -0.64
PMF1-204ENST00000466489 GPR161Q8N6U8 529 aaKnown RBP11.06□□□□□ -0.64
PMF1-204ENST00000466489 LMBR1Q8WVP7 490 aa11.06□□□□□ -0.64
PMF1-204ENST00000466489 ERCC4Q92889 916 aaPredicted RBP11.06□□□□□ -0.64
PMF1-204ENST00000466489 PCYT2Q99447 389 aa11.06□□□□□ -0.64
PMF1-204ENST00000466489 EIF2AK1Q9BQI3 630 aaKnown RBP11.06□□□□□ -0.64
PMF1-204ENST00000466489 XPO4Q9C0E2 1151 aaKnown RBP11.06□□□□□ -0.64
PMF1-204ENST00000466489 GBP3Q9H0R5 595 aa11.06□□□□□ -0.64
PMF1-204ENST00000466489 ACBD3Q9H3P7 528 aa11.06□□□□□ -0.64
PMF1-204ENST00000466489 HIPK3Q9H422 1215 aa11.06□□□□□ -0.64
PMF1-204ENST00000466489 RNPEPQ9H4A4 650 aa11.06□□□□□ -0.64
PMF1-204ENST00000466489 TRMT13Q9NUP7 481 aaKnown RBP11.06□□□□□ -0.64
PMF1-204ENST00000466489 SETD4Q9NVD3 440 aa11.06□□□□□ -0.64
PMF1-204ENST00000466489 CLIC4Q9Y696 253 aa11.06□□□□□ -0.64
PMF1-204ENST00000466489 CEP290O15078 2479 aa11.06□□□□□ -0.64
PMF1-204ENST00000466489 ARID2Q68CP9 1835 aa11.05□□□□□ -0.64
PMF1-204ENST00000466489 M0QZ92 97 aa11.05□□□□□ -0.64
PMF1-204ENST00000466489 EML1O00423 815 aa11.05□□□□□ -0.64
PMF1-204ENST00000466489 PITPNM1O00562 1244 aa11.05□□□□□ -0.64
PMF1-204ENST00000466489 KIAA0355O15063 1070 aa11.05□□□□□ -0.64
PMF1-204ENST00000466489 SLC26A4O43511 780 aa11.05□□□□□ -0.64
PMF1-204ENST00000466489 CAND2O75155 1236 aa11.05□□□□□ -0.64
PMF1-204ENST00000466489 PARNO95453 639 aaKnown RBP11.05□□□□□ -0.64
PMF1-204ENST00000466489 CD4P01730 458 aa11.05□□□□□ -0.64
PMF1-204ENST00000466489 LONP1P36776 959 aaKnown RBP11.05□□□□□ -0.64
PMF1-204ENST00000466489 CCT6AP40227 531 aaKnown RBP11.05□□□□□ -0.64
PMF1-204ENST00000466489 UBA7P41226 1012 aa11.05□□□□□ -0.64
PMF1-204ENST00000466489 CYP4A11Q02928 519 aa11.05□□□□□ -0.64
PMF1-204ENST00000466489 SPIRE1Q08AE8 756 aa11.05□□□□□ -0.64
PMF1-204ENST00000466489 TBC1D8BQ0IIM8 1120 aa11.05□□□□□ -0.64
PMF1-204ENST00000466489 FAAP100Q0VG06 881 aa11.05□□□□□ -0.64
PMF1-204ENST00000466489 TMCO3Q6UWJ1 677 aa11.05□□□□□ -0.64
PMF1-204ENST00000466489 C11orf57Q6ZUT1 292 aaPredicted RBP11.05□□□□□ -0.64
PMF1-204ENST00000466489 TRMT1LQ7Z2T5 733 aaKnown RBP11.05□□□□□ -0.64
PMF1-204ENST00000466489 TMC6Q7Z403 805 aa11.05□□□□□ -0.64
PMF1-204ENST00000466489 VSTM4Q8IW00 320 aa11.05□□□□□ -0.64
PMF1-204ENST00000466489 C4orf19Q8IY42 314 aa11.05□□□□□ -0.64
PMF1-204ENST00000466489 KCTD17Q8N5Z5 321 aa11.05□□□□□ -0.64
PMF1-204ENST00000466489 IGSF22Q8N9C0 903 aa11.05□□□□□ -0.64
PMF1-204ENST00000466489 IQUBQ8NA54 791 aa11.05□□□□□ -0.64
PMF1-204ENST00000466489 SNX29Q8TEQ0 813 aa11.05□□□□□ -0.64
PMF1-204ENST00000466489 CCDC47Q96A33 483 aaKnown RBP11.05□□□□□ -0.64
PMF1-204ENST00000466489 CALML4Q96GE6 196 aa11.05□□□□□ -0.64
PMF1-204ENST00000466489 POLR3CQ9BUI4 534 aaPredicted RBP11.05□□□□□ -0.64
PMF1-204ENST00000466489 TANC1Q9C0D5 1861 aa11.05□□□□□ -0.64
PMF1-204ENST00000466489 NT5C3AQ9H0P0 336 aa11.05□□□□□ -0.64
PMF1-204ENST00000466489 TSPYL1Q9H0U9 437 aa11.05□□□□□ -0.64
PMF1-204ENST00000466489 TRPV6Q9H1D0 765 aa11.05□□□□□ -0.64
PMF1-204ENST00000466489 TMX1Q9H3N1 280 aa11.05□□□□□ -0.64
PMF1-204ENST00000466489 GOLPH3LQ9H4A5 285 aa11.05□□□□□ -0.64
PMF1-204ENST00000466489 PDLIM7Q9NR12 457 aa11.05□□□□□ -0.64
PMF1-204ENST00000466489 ZNHIT6Q9NWK9 470 aaKnown RBP11.05□□□□□ -0.64
PMF1-204ENST00000466489 TELO2Q9Y4R8 837 aa11.05□□□□□ -0.64
PMF1-204ENST00000466489 TCHHQ07283 1943 aa11.05□□□□□ -0.64
PMF1-204ENST00000466489 KIF5CO60282 957 aa11.04□□□□□ -0.64
PMF1-204ENST00000466489 ERLIN1O75477 346 aa11.04□□□□□ -0.64
PMF1-204ENST00000466489 CCDC175P0C221 793 aa11.04□□□□□ -0.64
PMF1-204ENST00000466489 SLFN14P0C7P3 912 aa11.04□□□□□ -0.64
PMF1-204ENST00000466489 CYP2C9P11712 490 aa11.04□□□□□ -0.64
PMF1-204ENST00000466489 RPA1P27694 616 aa11.04□□□□□ -0.64
PMF1-204ENST00000466489 HOXC8P31273 242 aa11.04□□□□□ -0.64
PMF1-204ENST00000466489 YWHABP31946 246 aaKnown RBP11.04□□□□□ -0.64
PMF1-204ENST00000466489 DNM2P50570 870 aa11.04□□□□□ -0.64
PMF1-204ENST00000466489 LRMPQ12912 555 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms