RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 AFPP02771 609 aaKnown RBP20.01■□□□□ 0.79
COL9A3-205ENST00000466192 EDNRBP24530 442 aa20.01■□□□□ 0.79
COL9A3-205ENST00000466192 PPP2R3AQ06190 1150 aa20.01■□□□□ 0.79
COL9A3-205ENST00000466192 DCAF17Q5H9S7 520 aaPredicted RBP20.01■□□□□ 0.79
COL9A3-205ENST00000466192 CCDC122Q5T0U0 273 aa20.01■□□□□ 0.79
COL9A3-205ENST00000466192 CYFIP1Q7L576 1253 aa20.01■□□□□ 0.79
COL9A3-205ENST00000466192 SLC35C1Q96A29 364 aa20.01■□□□□ 0.79
COL9A3-205ENST00000466192 DRC1Q96MC2 740 aa20.01■□□□□ 0.79
COL9A3-205ENST00000466192 EIF3CQ99613 913 aaKnown RBP20.01■□□□□ 0.79
COL9A3-205ENST00000466192 HAUS4Q9H6D7 363 aa20.01■□□□□ 0.79
COL9A3-205ENST00000466192 DMAC2Q9NW81 257 aa20.01■□□□□ 0.79
COL9A3-205ENST00000466192 CEP72Q9P209 647 aa20.01■□□□□ 0.79
COL9A3-205ENST00000466192 CGNQ9P2M7 1197 aaKnown RBP20.01■□□□□ 0.79
COL9A3-205ENST00000466192 PSMC2P35998 433 aaKnown RBP20.01■□□□□ 0.79
COL9A3-205ENST00000466192 FAM102BQ5T8I3 360 aa20.01■□□□□ 0.79
COL9A3-205ENST00000466192 PDXDC1Q6P996 788 aa20.01■□□□□ 0.79
COL9A3-205ENST00000466192 SYCP3Q8IZU3 236 aa20.01■□□□□ 0.79
COL9A3-205ENST00000466192 UBXN4Q92575 508 aa20.01■□□□□ 0.79
COL9A3-205ENST00000466192 MYO1AQ9UBC5 1043 aa20.01■□□□□ 0.79
COL9A3-205ENST00000466192 CLEC11AQ9Y240 323 aa20.01■□□□□ 0.79
COL9A3-205ENST00000466192 TADA3O75528 432 aa20■□□□□ 0.79
COL9A3-205ENST00000466192 PEX3P56589 373 aa20■□□□□ 0.79
COL9A3-205ENST00000466192 OTUD6AQ7L8S5 288 aa20■□□□□ 0.79
COL9A3-205ENST00000466192 FAM186BQ8IYM0 893 aa20■□□□□ 0.79
COL9A3-205ENST00000466192 ZNF526Q8TF50 670 aaPredicted RBP20■□□□□ 0.79
COL9A3-205ENST00000466192 CEP170P1Q96L14 293 aa20■□□□□ 0.79
COL9A3-205ENST00000466192 RCCD1A6NED2 376 aa20■□□□□ 0.79
COL9A3-205ENST00000466192 GRIN3BO60391 1043 aa20■□□□□ 0.79
COL9A3-205ENST00000466192 SLC25A27O95847 323 aa20■□□□□ 0.79
COL9A3-205ENST00000466192 SUPT20HL2P0C7V6 817 aa20■□□□□ 0.79
COL9A3-205ENST00000466192 OSBPP22059 807 aa20■□□□□ 0.79
COL9A3-205ENST00000466192 CYP2J2P51589 502 aa20■□□□□ 0.79
COL9A3-205ENST00000466192 ALCAMQ13740 583 aa20■□□□□ 0.79
COL9A3-205ENST00000466192 TCERG1LQ5VWI1 586 aa20■□□□□ 0.79
COL9A3-205ENST00000466192 MAP1SQ66K74 1059 aaPredicted RBP20■□□□□ 0.79
COL9A3-205ENST00000466192 DPY19L2P1Q6NXN4 242 aa20■□□□□ 0.79
COL9A3-205ENST00000466192 HAUS6Q7Z4H7 955 aa20■□□□□ 0.79
COL9A3-205ENST00000466192 JAKMIP2Q96AA8 810 aa20■□□□□ 0.79
COL9A3-205ENST00000466192 MKNK1Q9BUB5 465 aa20■□□□□ 0.79
COL9A3-205ENST00000466192 LACRTQ9GZZ8 138 aa20■□□□□ 0.79
COL9A3-205ENST00000466192 EFCAB8A8MWE9 144 aa19.99■□□□□ 0.79
COL9A3-205ENST00000466192 ZNF263O14978 683 aa19.99■□□□□ 0.79
COL9A3-205ENST00000466192 DKC1O60832 514 aaKnown RBP eCLIP19.99■□□□□ 0.79
COL9A3-205ENST00000466192 POLR2FP61218 127 aaKnown RBP19.99■□□□□ 0.79
COL9A3-205ENST00000466192 PRKCEQ02156 737 aa19.99■□□□□ 0.79
COL9A3-205ENST00000466192 MIS18BP1Q6P0N0 1132 aa19.99■□□□□ 0.79
COL9A3-205ENST00000466192 GOLGA5Q8TBA6 731 aa19.99■□□□□ 0.79
COL9A3-205ENST00000466192 GANQ9H2C0 597 aa19.99■□□□□ 0.79
COL9A3-205ENST00000466192 DEF6Q9H4E7 631 aa19.99■□□□□ 0.79
COL9A3-205ENST00000466192 ST6GALNAC4Q9H4F1 302 aa19.99■□□□□ 0.79
COL9A3-205ENST00000466192 ZNF408Q9H9D4 720 aa19.99■□□□□ 0.79
COL9A3-205ENST00000466192 SYNGAP1Q96PV0 1343 aa19.99■□□□□ 0.79
COL9A3-205ENST00000466192 IGSF9BQ9UPX0 1349 aa19.99■□□□□ 0.79
COL9A3-205ENST00000466192 TISP43B9A030 160 aa19.98■□□□□ 0.79
COL9A3-205ENST00000466192 SLC16A4O15374 487 aa19.98■□□□□ 0.79
COL9A3-205ENST00000466192 KRT86O43790 486 aa19.98■□□□□ 0.79
COL9A3-205ENST00000466192 PGK2P07205 417 aa19.98■□□□□ 0.79
COL9A3-205ENST00000466192 SLC9A1P19634 815 aa19.98■□□□□ 0.79
COL9A3-205ENST00000466192 EIF4A3P38919 411 aaKnown RBP19.98■□□□□ 0.79
COL9A3-205ENST00000466192 NCKAP1LP55160 1127 aa19.98■□□□□ 0.79
COL9A3-205ENST00000466192 GTF2BQ00403 316 aa19.98■□□□□ 0.79
COL9A3-205ENST00000466192 SNAPC2Q13487 334 aa19.98■□□□□ 0.79
COL9A3-205ENST00000466192 SPA17Q15506 151 aa19.98■□□□□ 0.79
COL9A3-205ENST00000466192 SLC9A9Q8IVB4 645 aa19.98■□□□□ 0.79
COL9A3-205ENST00000466192 SLC10A4Q96EP9 437 aa19.98■□□□□ 0.79
COL9A3-205ENST00000466192 NAPGQ99747 312 aaPredicted RBP19.98■□□□□ 0.79
COL9A3-205ENST00000466192 CCDC94Q9BW85 323 aaPredicted RBP19.98■□□□□ 0.79
COL9A3-205ENST00000466192 TMEM206Q9H813 350 aa19.98■□□□□ 0.79
COL9A3-205ENST00000466192 ATG7O95352 703 aa19.98■□□□□ 0.79
COL9A3-205ENST00000466192 UBA1P22314 1058 aaKnown RBP19.98■□□□□ 0.79
COL9A3-205ENST00000466192 SOX10P56693 466 aa19.98■□□□□ 0.79
COL9A3-205ENST00000466192 FBXO38Q6PIJ6 1188 aa19.98■□□□□ 0.79
COL9A3-205ENST00000466192 FGD4Q96M96 766 aa19.98■□□□□ 0.79
COL9A3-205ENST00000466192 ACCSQ96QU6 501 aa19.98■□□□□ 0.79
COL9A3-205ENST00000466192 SEPT9Q9UHD8 586 aaPredicted RBP19.98■□□□□ 0.79
COL9A3-205ENST00000466192 ACTN1P12814 892 aa19.97■□□□□ 0.79
COL9A3-205ENST00000466192 KIF11P52732 1056 aa19.97■□□□□ 0.79
COL9A3-205ENST00000466192 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.97■□□□□ 0.79
COL9A3-205ENST00000466192 PDLIM7Q9NR12 457 aa19.97■□□□□ 0.79
COL9A3-205ENST00000466192 CDC23Q9UJX2 597 aa19.97■□□□□ 0.79
COL9A3-205ENST00000466192 FRMD4BQ9Y2L6 1034 aa19.97■□□□□ 0.79
COL9A3-205ENST00000466192 DUSP10Q9Y6W6 482 aa19.97■□□□□ 0.79
COL9A3-205ENST00000466192 AKR1B10O60218 316 aa19.97■□□□□ 0.79
COL9A3-205ENST00000466192 ATP4AP20648 1035 aa19.97■□□□□ 0.79
COL9A3-205ENST00000466192 PON1P27169 355 aa19.97■□□□□ 0.79
COL9A3-205ENST00000466192 EXOC3L4Q17RC7 722 aa19.97■□□□□ 0.79
COL9A3-205ENST00000466192 ZNF662Q6ZS27 426 aa19.97■□□□□ 0.79
COL9A3-205ENST00000466192 BSNDQ8WZ55 320 aa19.97■□□□□ 0.79
COL9A3-205ENST00000466192 CYP26B1Q9NR63 512 aa19.97■□□□□ 0.79
COL9A3-205ENST00000466192 TLR2O60603 784 aa19.96■□□□□ 0.79
COL9A3-205ENST00000466192 NPTX2P47972 431 aa19.96■□□□□ 0.79
COL9A3-205ENST00000466192 HGSNATQ68CP4 663 aa19.96■□□□□ 0.79
COL9A3-205ENST00000466192 EEPD1Q7L9B9 569 aa19.96■□□□□ 0.79
COL9A3-205ENST00000466192 KIFC3Q9BVG8 833 aa19.96■□□□□ 0.79
COL9A3-205ENST00000466192 IFIH1Q9BYX4 1025 aaKnown RBP19.96■□□□□ 0.79
COL9A3-205ENST00000466192 PLCB1Q9NQ66 1216 aa19.96■□□□□ 0.79
COL9A3-205ENST00000466192 XPNPEP1Q9NQW7 623 aa19.96■□□□□ 0.79
COL9A3-205ENST00000466192 MAFBQ9Y5Q3 323 aaPredicted RBP19.96■□□□□ 0.79
COL9A3-205ENST00000466192 SOCS7O14512 581 aa19.95■□□□□ 0.78
COL9A3-205ENST00000466192 EXOC3O60645 756 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms