RNA–Protein interactions for RNA: ENST00000465339.5

COL28A1-206, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 3

Gene COL28A1, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-206ENST00000465339 PAK2Q13177 524 aa14.58□□□□□ -0.08
COL28A1-206ENST00000465339 KIZQ2M2Z5 673 aa14.58□□□□□ -0.08
COL28A1-206ENST00000465339 TMEM266Q2M3C6 531 aa14.58□□□□□ -0.08
COL28A1-206ENST00000465339 PPP2R2DQ66LE6 453 aa14.58□□□□□ -0.08
COL28A1-206ENST00000465339 MYOCDQ8IZQ8 938 aa14.58□□□□□ -0.08
COL28A1-206ENST00000465339 C4orf32Q8N8J7 132 aa14.58□□□□□ -0.08
COL28A1-206ENST00000465339 TOP1MTQ969P6 601 aa14.58□□□□□ -0.08
COL28A1-206ENST00000465339 SNX21Q969T3 373 aa14.58□□□□□ -0.08
COL28A1-206ENST00000465339 CEP170P1Q96L14 293 aa14.58□□□□□ -0.08
COL28A1-206ENST00000465339 GUCD1Q96NT3 240 aa14.58□□□□□ -0.08
COL28A1-206ENST00000465339 CDX2Q99626 313 aaPredicted RBP14.58□□□□□ -0.08
COL28A1-206ENST00000465339 STXBP5LQ9Y2K9 1186 aa14.58□□□□□ -0.08
COL28A1-206ENST00000465339 INSL6Q9Y581 213 aa14.58□□□□□ -0.08
COL28A1-206ENST00000465339 ARID2Q68CP9 1835 aa14.57□□□□□ -0.08
COL28A1-206ENST00000465339 TMEM150BA6NC51 233 aa14.57□□□□□ -0.08
COL28A1-206ENST00000465339 CA3P07451 260 aa14.57□□□□□ -0.08
COL28A1-206ENST00000465339 NPEPPSP55786 919 aa14.57□□□□□ -0.08
COL28A1-206ENST00000465339 PTGDRQ13258 359 aa14.57□□□□□ -0.08
COL28A1-206ENST00000465339 PDIA5Q14554 519 aa14.57□□□□□ -0.08
COL28A1-206ENST00000465339 GRIN2CQ14957 1233 aa14.57□□□□□ -0.08
COL28A1-206ENST00000465339 XKR9Q5GH70 373 aa14.57□□□□□ -0.08
COL28A1-206ENST00000465339 PLA2G4FQ68DD2 849 aa14.57□□□□□ -0.08
COL28A1-206ENST00000465339 TMCO2Q7Z6W1 182 aaPredicted RBP14.57□□□□□ -0.08
COL28A1-206ENST00000465339 ERMNQ8TAM6 284 aa14.57□□□□□ -0.08
COL28A1-206ENST00000465339 SLC7A3Q8WY07 619 aa14.57□□□□□ -0.08
COL28A1-206ENST00000465339 SH2D3AQ9BRG2 576 aa14.57□□□□□ -0.08
COL28A1-206ENST00000465339 ADAMTS10Q9H324 1103 aa14.57□□□□□ -0.08
COL28A1-206ENST00000465339 TUFT1Q9NNX1 390 aa14.57□□□□□ -0.08
COL28A1-206ENST00000465339 ANKEF1Q9NU02 776 aa14.57□□□□□ -0.08
COL28A1-206ENST00000465339 NOC2LQ9Y3T9 749 aaKnown RBP14.57□□□□□ -0.08
COL28A1-206ENST00000465339 PCDHB6Q9Y5E3 794 aa14.57□□□□□ -0.08
COL28A1-206ENST00000465339 TTC3P53804 2025 aa14.57□□□□□ -0.08
COL28A1-206ENST00000465339 POTEMA6NI47 508 aa14.56□□□□□ -0.08
COL28A1-206ENST00000465339 GAS2O43903 313 aaKnown RBP14.56□□□□□ -0.08
COL28A1-206ENST00000465339 EIF4BP23588 611 aaKnown RBP14.56□□□□□ -0.08
COL28A1-206ENST00000465339 PRPHP41219 470 aa14.56□□□□□ -0.08
COL28A1-206ENST00000465339 GPC3P51654 580 aa14.56□□□□□ -0.08
COL28A1-206ENST00000465339 POLGP54098 1239 aaPredicted RBP14.56□□□□□ -0.08
COL28A1-206ENST00000465339 HTRA4P83105 476 aaPredicted RBP14.56□□□□□ -0.08
COL28A1-206ENST00000465339 NFX1Q12986 1120 aaKnown RBP14.56□□□□□ -0.08
COL28A1-206ENST00000465339 FAM117BQ6P1L5 589 aa14.56□□□□□ -0.08
COL28A1-206ENST00000465339 TMEM40Q8WWA1 233 aa14.56□□□□□ -0.08
COL28A1-206ENST00000465339 OSMRQ99650 979 aa14.56□□□□□ -0.08
COL28A1-206ENST00000465339 POLR3CQ9BUI4 534 aaPredicted RBP14.56□□□□□ -0.08
COL28A1-206ENST00000465339 RAB34Q9BZG1 259 aa14.56□□□□□ -0.08
COL28A1-206ENST00000465339 DHX33Q9H6R0 707 aaKnown RBP14.56□□□□□ -0.08
COL28A1-206ENST00000465339 ERVK-5Q9HDB9 667 aa14.56□□□□□ -0.08
COL28A1-206ENST00000465339 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.56□□□□□ -0.08
COL28A1-206ENST00000465339 SUCLA2Q9P2R7 463 aaPredicted RBP14.56□□□□□ -0.08
COL28A1-206ENST00000465339 ST3GAL5Q9UNP4 418 aa14.56□□□□□ -0.08
COL28A1-206ENST00000465339 ZBTB39O15060 712 aa14.55□□□□□ -0.08
COL28A1-206ENST00000465339 UPP2O95045 317 aa14.55□□□□□ -0.08
COL28A1-206ENST00000465339 SPATA31C1P0DKV0 1188 aa14.55□□□□□ -0.08
COL28A1-206ENST00000465339 MUTP22033 750 aa14.55□□□□□ -0.08
COL28A1-206ENST00000465339 RPA1P27694 616 aa14.55□□□□□ -0.08
COL28A1-206ENST00000465339 TAP1Q03518 808 aa14.55□□□□□ -0.08
COL28A1-206ENST00000465339 BRAPQ7Z569 592 aa14.55□□□□□ -0.08
COL28A1-206ENST00000465339 RTN4RL1Q86UN2 441 aaPredicted RBP14.55□□□□□ -0.08
COL28A1-206ENST00000465339 ZNF410Q86VK4 478 aa14.55□□□□□ -0.08
COL28A1-206ENST00000465339 CATSPER3Q86XQ3 398 aa14.55□□□□□ -0.08
COL28A1-206ENST00000465339 TCP11Q8WWU5 503 aa14.55□□□□□ -0.08
COL28A1-206ENST00000465339 SCLT1Q96NL6 688 aa14.55□□□□□ -0.08
COL28A1-206ENST00000465339 NACC1Q96RE7 527 aa14.55□□□□□ -0.08
COL28A1-206ENST00000465339 PPP1R16BQ96T49 567 aa14.55□□□□□ -0.08
COL28A1-206ENST00000465339 GCOM2Q9BZD3 368 aaPredicted RBP14.55□□□□□ -0.08
COL28A1-206ENST00000465339 LRWD1Q9UFC0 647 aa14.55□□□□□ -0.08
COL28A1-206ENST00000465339 CHD9Q3L8U1 2897 aa14.54□□□□□ -0.08
COL28A1-206ENST00000465339 RBAK-RBAKDNI3L0D1 243 aa14.54□□□□□ -0.08
COL28A1-206ENST00000465339 ASAP2O43150 1006 aa14.54□□□□□ -0.08
COL28A1-206ENST00000465339 DARSP14868 501 aaKnown RBP14.54□□□□□ -0.08
COL28A1-206ENST00000465339 DRP2Q13474 957 aa14.54□□□□□ -0.08
COL28A1-206ENST00000465339 TMEM132AQ24JP5 1023 aa14.54□□□□□ -0.08
COL28A1-206ENST00000465339 HAUS3Q68CZ6 603 aa14.54□□□□□ -0.08
COL28A1-206ENST00000465339 DTHD1Q6ZMT9 781 aa14.54□□□□□ -0.08
COL28A1-206ENST00000465339 FAM228AQ86W67 206 aa14.54□□□□□ -0.08
COL28A1-206ENST00000465339 RHPN2Q8IUC4 686 aa14.54□□□□□ -0.08
COL28A1-206ENST00000465339 IGSF22Q8N9C0 903 aa14.54□□□□□ -0.08
COL28A1-206ENST00000465339 NLRP7Q8WX94 980 aa14.54□□□□□ -0.08
COL28A1-206ENST00000465339 MYLIPQ8WY64 445 aa14.54□□□□□ -0.08
COL28A1-206ENST00000465339 CCDC43Q96MW1 224 aaKnown RBP14.54□□□□□ -0.08
COL28A1-206ENST00000465339 YME1L1Q96TA2 773 aa14.54□□□□□ -0.08
COL28A1-206ENST00000465339 GAS2L1Q99501 681 aaPredicted RBP14.54□□□□□ -0.08
COL28A1-206ENST00000465339 INO80BQ9C086 356 aaPredicted RBP14.54□□□□□ -0.08
COL28A1-206ENST00000465339 TMX1Q9H3N1 280 aa14.54□□□□□ -0.08
COL28A1-206ENST00000465339 PRDM12Q9H4Q4 367 aa14.54□□□□□ -0.08
COL28A1-206ENST00000465339 C1orf112Q9NSG2 853 aa14.54□□□□□ -0.08
COL28A1-206ENST00000465339 RYDENQ9NUL5 291 aaKnown RBP14.54□□□□□ -0.08
COL28A1-206ENST00000465339 DENND3A2RUS2 1198 aa14.53□□□□□ -0.08
COL28A1-206ENST00000465339 VPS37CA5D8V6 355 aaPredicted RBP14.53□□□□□ -0.08
COL28A1-206ENST00000465339 MED24O75448 989 aa14.53□□□□□ -0.08
COL28A1-206ENST00000465339 DGAT1O75907 488 aa14.53□□□□□ -0.08
COL28A1-206ENST00000465339 STAG3L1P0CL83 205 aa14.53□□□□□ -0.08
COL28A1-206ENST00000465339 ATP2C1P98194 919 aaPredicted RBP14.53□□□□□ -0.08
COL28A1-206ENST00000465339 EMC2Q15006 297 aa14.53□□□□□ -0.08
COL28A1-206ENST00000465339 NPAS4Q8IUM7 802 aa14.53□□□□□ -0.08
COL28A1-206ENST00000465339 HSCBQ8IWL3 235 aa14.53□□□□□ -0.08
COL28A1-206ENST00000465339 CRIPAKQ8N1N5 446 aa14.53□□□□□ -0.08
COL28A1-206ENST00000465339 PIGOQ8TEQ8 1089 aa14.53□□□□□ -0.08
COL28A1-206ENST00000465339 PRPF31Q8WWY3 499 aaKnown RBP14.53□□□□□ -0.08
COL28A1-206ENST00000465339 PSPC1Q8WXF1 523 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms