RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 MGAT3Q09327 533 aa20.55■□□□□ 0.88
SCAMP3-204ENST00000465312 RAD51AP2Q09MP3 1159 aa20.55■□□□□ 0.88
SCAMP3-204ENST00000465312 MCM6Q14566 821 aa20.55■□□□□ 0.88
SCAMP3-204ENST00000465312 CSPP1Q1MSJ5 1256 aa20.55■□□□□ 0.88
SCAMP3-204ENST00000465312 PSRC1Q6PGN9 363 aaPredicted RBP20.55■□□□□ 0.88
SCAMP3-204ENST00000465312 SHC4Q6S5L8 630 aa20.55■□□□□ 0.88
SCAMP3-204ENST00000465312 KCTD17Q8N5Z5 321 aa20.55■□□□□ 0.88
SCAMP3-204ENST00000465312 LARP4BQ92615 738 aaKnown RBP20.55■□□□□ 0.88
SCAMP3-204ENST00000465312 RAD54LQ92698 747 aa20.55■□□□□ 0.88
SCAMP3-204ENST00000465312 COL4A3BPQ9Y5P4 624 aa20.55■□□□□ 0.88
SCAMP3-204ENST00000465312 CEP290O15078 2479 aa20.54■□□□□ 0.88
SCAMP3-204ENST00000465312 NBNO60934 754 aa20.54■□□□□ 0.88
SCAMP3-204ENST00000465312 PFKMP08237 780 aa20.54■□□□□ 0.88
SCAMP3-204ENST00000465312 SRGAP2CP0DJJ0 459 aa20.54■□□□□ 0.88
SCAMP3-204ENST00000465312 ACTN1P12814 892 aa20.54■□□□□ 0.88
SCAMP3-204ENST00000465312 GPC3P51654 580 aa20.54■□□□□ 0.88
SCAMP3-204ENST00000465312 MKRN4PQ13434 485 aaPredicted RBP20.54■□□□□ 0.88
SCAMP3-204ENST00000465312 TFDP1Q14186 410 aa20.54■□□□□ 0.88
SCAMP3-204ENST00000465312 FAM26DQ5JW98 314 aa20.54■□□□□ 0.88
SCAMP3-204ENST00000465312 GPBP1Q86WP2 473 aa20.54■□□□□ 0.88
SCAMP3-204ENST00000465312 KSR1Q8IVT5 923 aa20.54■□□□□ 0.88
SCAMP3-204ENST00000465312 LINC01465Q8N7H1 131 aa20.54■□□□□ 0.88
SCAMP3-204ENST00000465312 PRPF31Q8WWY3 499 aaKnown RBP20.54■□□□□ 0.88
SCAMP3-204ENST00000465312 DHX58Q96C10 678 aa20.54■□□□□ 0.88
SCAMP3-204ENST00000465312 GPRC5CQ9NQ84 441 aa20.54■□□□□ 0.88
SCAMP3-204ENST00000465312 XPNPEP1Q9NQW7 623 aa20.54■□□□□ 0.88
SCAMP3-204ENST00000465312 STK17AQ9UEE5 414 aa20.54■□□□□ 0.88
SCAMP3-204ENST00000465312 A0A087WZ62 844 aa20.53■□□□□ 0.88
SCAMP3-204ENST00000465312 RPS6KA5O75582 802 aa20.53■□□□□ 0.88
SCAMP3-204ENST00000465312 FGBP02675 491 aa20.53■□□□□ 0.88
SCAMP3-204ENST00000465312 CYP11B2P19099 503 aa20.53■□□□□ 0.88
SCAMP3-204ENST00000465312 CRYBB1P53674 252 aaPredicted RBP20.53■□□□□ 0.88
SCAMP3-204ENST00000465312 CDC42EP1Q00587 391 aa20.53■□□□□ 0.88
SCAMP3-204ENST00000465312 LAMTOR4Q0VGL1 99 aa20.53■□□□□ 0.88
SCAMP3-204ENST00000465312 NFX1Q12986 1120 aaKnown RBP20.53■□□□□ 0.88
SCAMP3-204ENST00000465312 PAK2Q13177 524 aa20.53■□□□□ 0.88
SCAMP3-204ENST00000465312 MXD4Q14582 209 aaPredicted RBP20.53■□□□□ 0.88
SCAMP3-204ENST00000465312 MBTPS1Q14703 1052 aa20.53■□□□□ 0.88
SCAMP3-204ENST00000465312 AXDND1Q5T1B0 1012 aaPredicted RBP20.53■□□□□ 0.88
SCAMP3-204ENST00000465312 TRAF7Q6Q0C0 670 aa20.53■□□□□ 0.88
SCAMP3-204ENST00000465312 ZNF365Q70YC5 407 aa20.53■□□□□ 0.88
SCAMP3-204ENST00000465312 OTOP2Q7RTS6 562 aa20.53■□□□□ 0.88
SCAMP3-204ENST00000465312 SYT2Q8N9I0 419 aaPredicted RBP20.53■□□□□ 0.88
SCAMP3-204ENST00000465312 SEPT8Q92599 483 aa20.53■□□□□ 0.88
SCAMP3-204ENST00000465312 GDF15Q99988 308 aa20.53■□□□□ 0.88
SCAMP3-204ENST00000465312 FDXACB1Q9BRP7 624 aaPredicted RBP20.53■□□□□ 0.88
SCAMP3-204ENST00000465312 RUSC1Q9BVN2 902 aa20.53■□□□□ 0.88
SCAMP3-204ENST00000465312 IFIH1Q9BYX4 1025 aaKnown RBP20.53■□□□□ 0.88
SCAMP3-204ENST00000465312 GCOM2Q9BZD3 368 aaPredicted RBP20.53■□□□□ 0.88
SCAMP3-204ENST00000465312 MTIF3Q9H2K0 278 aaKnown RBP20.53■□□□□ 0.88
SCAMP3-204ENST00000465312 CDHR5Q9HBB8 845 aa20.53■□□□□ 0.88
SCAMP3-204ENST00000465312 POLD4Q9HCU8 107 aa20.53■□□□□ 0.88
SCAMP3-204ENST00000465312 LRRIQ4A6NIV6 560 aa20.52■□□□□ 0.88
SCAMP3-204ENST00000465312 ASAP2O43150 1006 aa20.52■□□□□ 0.88
SCAMP3-204ENST00000465312 IBSPP21815 317 aaPredicted RBP20.52■□□□□ 0.88
SCAMP3-204ENST00000465312 EPHB4P54760 987 aa20.52■□□□□ 0.88
SCAMP3-204ENST00000465312 LPIN1Q14693 890 aa20.52■□□□□ 0.88
SCAMP3-204ENST00000465312 FBXO47Q5MNV8 452 aa20.52■□□□□ 0.88
SCAMP3-204ENST00000465312 RESP18Q5W5W9 173 aa20.52■□□□□ 0.88
SCAMP3-204ENST00000465312 ADALQ6DHV7 355 aa20.52■□□□□ 0.88
SCAMP3-204ENST00000465312 RINT1Q6NUQ1 792 aa20.52■□□□□ 0.88
SCAMP3-204ENST00000465312 TSHZ1Q6ZSZ6 1077 aa20.52■□□□□ 0.88
SCAMP3-204ENST00000465312 SV2BQ7L1I2 683 aa20.52■□□□□ 0.88
SCAMP3-204ENST00000465312 ZNF710Q8N1W2 664 aa20.52■□□□□ 0.88
SCAMP3-204ENST00000465312 RNF149Q8NC42 400 aa20.52■□□□□ 0.88
SCAMP3-204ENST00000465312 IFT74Q96LB3 600 aa20.52■□□□□ 0.88
SCAMP3-204ENST00000465312 RNPC3Q96LT9 517 aaKnown RBP20.52■□□□□ 0.88
SCAMP3-204ENST00000465312 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.52■□□□□ 0.889e-9■□□□□ 10
SCAMP3-204ENST00000465312 ZHX3Q9H4I2 956 aa20.52■□□□□ 0.88
SCAMP3-204ENST00000465312 SIP14410 1827 aa20.51■□□□□ 0.87
SCAMP3-204ENST00000465312 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.51■□□□□ 0.87
SCAMP3-204ENST00000465312 A0A1B0GVL5 298 aa20.51■□□□□ 0.87
SCAMP3-204ENST00000465312 RBAK-RBAKDNI3L0D1 243 aa20.51■□□□□ 0.87
SCAMP3-204ENST00000465312 POLR2DO15514 142 aaKnown RBP20.51■□□□□ 0.87
SCAMP3-204ENST00000465312 GPR32O75388 356 aa20.51■□□□□ 0.87
SCAMP3-204ENST00000465312 CD52P31358 61 aa20.51■□□□□ 0.87
SCAMP3-204ENST00000465312 PHKA2P46019 1235 aa20.51■□□□□ 0.87
SCAMP3-204ENST00000465312 SLC12A3P55017 1021 aa20.51■□□□□ 0.87
SCAMP3-204ENST00000465312 CACNB1Q02641 598 aaPredicted RBP20.51■□□□□ 0.87
SCAMP3-204ENST00000465312 ODR4Q5SWX8 454 aa20.51■□□□□ 0.87
SCAMP3-204ENST00000465312 CNKSR3Q6P9H4 555 aa20.51■□□□□ 0.87
SCAMP3-204ENST00000465312 ZNF410Q86VK4 478 aa20.51■□□□□ 0.87
SCAMP3-204ENST00000465312 FSIP1Q8NA03 581 aa20.51■□□□□ 0.87
SCAMP3-204ENST00000465312 IQUBQ8NA54 791 aa20.51■□□□□ 0.87
SCAMP3-204ENST00000465312 DBF4BQ8NFT6 615 aa20.51■□□□□ 0.87
SCAMP3-204ENST00000465312 ASAP3Q8TDY4 903 aa20.51■□□□□ 0.87
SCAMP3-204ENST00000465312 KIFAP3Q92845 792 aa20.51■□□□□ 0.87
SCAMP3-204ENST00000465312 DRC1Q96MC2 740 aa20.51■□□□□ 0.87
SCAMP3-204ENST00000465312 BLOC1S4Q9NUP1 217 aa20.51■□□□□ 0.87
SCAMP3-204ENST00000465312 A0A087X0B3 334 aa20.5■□□□□ 0.87
SCAMP3-204ENST00000465312 NPHP3-ACAD11A0A0J9YXS1 232 aa20.5■□□□□ 0.87
SCAMP3-204ENST00000465312 HIP1RO75146 1068 aa20.5■□□□□ 0.87
SCAMP3-204ENST00000465312 TBCAO75347 108 aaKnown RBP20.5■□□□□ 0.87
SCAMP3-204ENST00000465312 PFKFB1P16118 471 aa20.5■□□□□ 0.87
SCAMP3-204ENST00000465312 LIG1P18858 919 aa20.5■□□□□ 0.87
SCAMP3-204ENST00000465312 IKBKEQ14164 716 aa20.5■□□□□ 0.87
SCAMP3-204ENST00000465312 CEP57L1Q8IYX8 460 aa20.5■□□□□ 0.87
SCAMP3-204ENST00000465312 USP38Q8NB14 1042 aa20.5■□□□□ 0.87
SCAMP3-204ENST00000465312 MRPS27Q92552 414 aaKnown RBP20.5■□□□□ 0.87
SCAMP3-204ENST00000465312 PYM1Q9BRP8 204 aaKnown RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms