RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 IFNLR1Q8IU57 520 aaPredicted RBP15.24■□□□□ 0.03
LIMD1-203ENST00000465039 ZBTB10Q96DT7 871 aa15.24■□□□□ 0.03
LIMD1-203ENST00000465039 SCAND2PQ9GZW5 306 aaPredicted RBP15.24■□□□□ 0.03
LIMD1-203ENST00000465039 BHMT2Q9H2M3 363 aa15.24■□□□□ 0.03
LIMD1-203ENST00000465039 C17orf75Q9HAS0 396 aa15.24■□□□□ 0.03
LIMD1-203ENST00000465039 XPNPEP1Q9NQW7 623 aa15.24■□□□□ 0.03
LIMD1-203ENST00000465039 CCDC39Q9UFE4 941 aa15.24■□□□□ 0.03
LIMD1-203ENST00000465039 KCNG1Q9UIX4 513 aa15.24■□□□□ 0.03
LIMD1-203ENST00000465039 RCOR1Q9UKL0 485 aa15.24■□□□□ 0.03
LIMD1-203ENST00000465039 COL4A3BPQ9Y5P4 624 aa15.24■□□□□ 0.03
LIMD1-203ENST00000465039 COL4A6Q14031 1691 aa15.24■□□□□ 0.03
LIMD1-203ENST00000465039 MICAL3Q7RTP6 2002 aa15.24■□□□□ 0.03
LIMD1-203ENST00000465039 PHLPP2Q6ZVD8 1323 aa15.23■□□□□ 0.03
LIMD1-203ENST00000465039 CUTAO60888 179 aa15.23■□□□□ 0.03
LIMD1-203ENST00000465039 VTNP04004 478 aa15.23■□□□□ 0.03
LIMD1-203ENST00000465039 ACRP10323 421 aa15.23■□□□□ 0.03
LIMD1-203ENST00000465039 GHRP10912 638 aa15.23■□□□□ 0.03
LIMD1-203ENST00000465039 DARSP14868 501 aaKnown RBP15.23■□□□□ 0.03
LIMD1-203ENST00000465039 SCP2P22307 547 aa15.23■□□□□ 0.03
LIMD1-203ENST00000465039 ARL2P36404 184 aa15.23■□□□□ 0.03
LIMD1-203ENST00000465039 KCNJ6P48051 423 aa15.23■□□□□ 0.03
LIMD1-203ENST00000465039 NLRP11P59045 1033 aaKnown RBP15.23■□□□□ 0.03
LIMD1-203ENST00000465039 GRB10Q13322 594 aa15.23■□□□□ 0.03
LIMD1-203ENST00000465039 PPP2R5AQ15172 486 aa15.23■□□□□ 0.03
LIMD1-203ENST00000465039 ECM1Q16610 540 aa15.23■□□□□ 0.03
LIMD1-203ENST00000465039 KIZQ2M2Z5 673 aa15.23■□□□□ 0.03
LIMD1-203ENST00000465039 HABP4Q5JVS0 413 aaKnown RBP15.23■□□□□ 0.03
LIMD1-203ENST00000465039 SRGAP1Q7Z6B7 1085 aa15.23■□□□□ 0.03
LIMD1-203ENST00000465039 DBF4BQ8NFT6 615 aa15.23■□□□□ 0.03
LIMD1-203ENST00000465039 KIFAP3Q92845 792 aa15.23■□□□□ 0.03
LIMD1-203ENST00000465039 PYM1Q9BRP8 204 aaKnown RBP15.23■□□□□ 0.03
LIMD1-203ENST00000465039 GCOM2Q9BZD3 368 aaPredicted RBP15.23■□□□□ 0.03
LIMD1-203ENST00000465039 CSRNP2Q9H175 543 aa15.23■□□□□ 0.03
LIMD1-203ENST00000465039 SLC4A7Q9Y6M7 1214 aa15.23■□□□□ 0.03
LIMD1-203ENST00000465039 TMEM265A0A087WTH1 108 aa15.22■□□□□ 0.03
LIMD1-203ENST00000465039 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.22■□□□□ 0.03
LIMD1-203ENST00000465039 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.22■□□□□ 0.03
LIMD1-203ENST00000465039 ZBTB39O15060 712 aa15.22■□□□□ 0.03
LIMD1-203ENST00000465039 RPS6KA5O75582 802 aa15.22■□□□□ 0.03
LIMD1-203ENST00000465039 SFPQP23246 707 aaKnown RBP eCLIP15.22■□□□□ 0.03
LIMD1-203ENST00000465039 GUCY2CP25092 1073 aa15.22■□□□□ 0.03
LIMD1-203ENST00000465039 MARCKSP29966 332 aaPredicted RBP15.22■□□□□ 0.03
LIMD1-203ENST00000465039 PHKA2P46019 1235 aa15.22■□□□□ 0.03
LIMD1-203ENST00000465039 CEBPZQ03701 1054 aaKnown RBP15.22■□□□□ 0.03
LIMD1-203ENST00000465039 LAMTOR4Q0VGL1 99 aa15.22■□□□□ 0.03
LIMD1-203ENST00000465039 DRP2Q13474 957 aa15.22■□□□□ 0.03
LIMD1-203ENST00000465039 CCDC73Q6ZRK6 1079 aa15.22■□□□□ 0.03
LIMD1-203ENST00000465039 OTOP2Q7RTS6 562 aa15.22■□□□□ 0.03
LIMD1-203ENST00000465039 SYT2Q8N9I0 419 aaPredicted RBP15.22■□□□□ 0.03
LIMD1-203ENST00000465039 PRPF31Q8WWY3 499 aaKnown RBP15.22■□□□□ 0.03
LIMD1-203ENST00000465039 NLRP7Q8WX94 980 aa15.22■□□□□ 0.03
LIMD1-203ENST00000465039 RSPH1Q8WYR4 309 aa15.22■□□□□ 0.03
LIMD1-203ENST00000465039 DRC1Q96MC2 740 aa15.22■□□□□ 0.03
LIMD1-203ENST00000465039 SCLT1Q96NL6 688 aa15.22■□□□□ 0.03
LIMD1-203ENST00000465039 PNMA5Q96PV4 448 aa15.22■□□□□ 0.03
LIMD1-203ENST00000465039 CUEDC2Q9H467 287 aa15.22■□□□□ 0.03
LIMD1-203ENST00000465039 ERVK-5Q9HDB9 667 aa15.22■□□□□ 0.03
LIMD1-203ENST00000465039 USO1O60763 962 aaKnown RBP15.21■□□□□ 0.03
LIMD1-203ENST00000465039 AMHP03971 560 aa15.21■□□□□ 0.03
LIMD1-203ENST00000465039 CDC25AP30304 524 aa15.21■□□□□ 0.03
LIMD1-203ENST00000465039 WDR5P61964 334 aaKnown RBP15.21■□□□□ 0.03
LIMD1-203ENST00000465039 DNM1Q05193 864 aaKnown RBP15.21■□□□□ 0.03
LIMD1-203ENST00000465039 GRIN1Q05586 938 aa15.21■□□□□ 0.03
LIMD1-203ENST00000465039 TMEM62Q0P6H9 643 aa15.21■□□□□ 0.03
LIMD1-203ENST00000465039 RHPN2Q8IUC4 686 aa15.21■□□□□ 0.03
LIMD1-203ENST00000465039 RASSF8Q8NHQ8 419 aa15.21■□□□□ 0.03
LIMD1-203ENST00000465039 TMEM40Q8WWA1 233 aa15.21■□□□□ 0.03
LIMD1-203ENST00000465039 SYMPKQ92797 1274 aaKnown RBP15.21■□□□□ 0.03
LIMD1-203ENST00000465039 KCNN1Q92952 543 aa15.21■□□□□ 0.03
LIMD1-203ENST00000465039 OSMRQ99650 979 aa15.21■□□□□ 0.03
LIMD1-203ENST00000465039 SH2D3AQ9BRG2 576 aa15.21■□□□□ 0.03
LIMD1-203ENST00000465039 TRAIPQ9BWF2 469 aa15.21■□□□□ 0.03
LIMD1-203ENST00000465039 TSPYL2Q9H2G4 693 aaPredicted RBP15.21■□□□□ 0.03
LIMD1-203ENST00000465039 AGO3Q9H9G7 860 aaKnown RBP15.21■□□□□ 0.03
LIMD1-203ENST00000465039 IFT122Q9HBG6 1241 aa15.21■□□□□ 0.03
LIMD1-203ENST00000465039 CHST12Q9NRB3 414 aa15.21■□□□□ 0.03
LIMD1-203ENST00000465039 C1orf112Q9NSG2 853 aa15.21■□□□□ 0.03
LIMD1-203ENST00000465039 TFIP11Q9UBB9 837 aaKnown RBP15.21■□□□□ 0.03
LIMD1-203ENST00000465039 PADI3Q9ULW8 664 aa15.21■□□□□ 0.03
LIMD1-203ENST00000465039 ATP2A2P16615 1042 aaKnown RBP15.2■□□□□ 0.02
LIMD1-203ENST00000465039 PLCG1P19174 1290 aa15.2■□□□□ 0.02
LIMD1-203ENST00000465039 CD52P31358 61 aa15.2■□□□□ 0.02
LIMD1-203ENST00000465039 NAMPTP43490 491 aa15.2■□□□□ 0.02
LIMD1-203ENST00000465039 SLC12A3P55017 1021 aa15.2■□□□□ 0.02
LIMD1-203ENST00000465039 PTENP60484 403 aa15.2■□□□□ 0.02
LIMD1-203ENST00000465039 RAB30Q15771 203 aa15.2■□□□□ 0.02
LIMD1-203ENST00000465039 AXDND1Q5T1B0 1012 aaPredicted RBP15.2■□□□□ 0.02
LIMD1-203ENST00000465039 FOXD4L5Q5VV16 416 aaPredicted RBP15.2■□□□□ 0.02
LIMD1-203ENST00000465039 FOXD4L4Q8WXT5 416 aaPredicted RBP15.2■□□□□ 0.02
LIMD1-203ENST00000465039 TMEM143Q96AN5 459 aa15.2■□□□□ 0.02
LIMD1-203ENST00000465039 C2orf40Q9H1Z8 148 aa15.2■□□□□ 0.02
LIMD1-203ENST00000465039 MAGEF1Q9HAY2 307 aa15.2■□□□□ 0.02
LIMD1-203ENST00000465039 CXXC1Q9P0U4 656 aaPredicted RBP15.2■□□□□ 0.02
LIMD1-203ENST00000465039 ODF2LQ9ULJ1 636 aa15.2■□□□□ 0.02
LIMD1-203ENST00000465039 GINS2Q9Y248 185 aa15.2■□□□□ 0.02
LIMD1-203ENST00000465039 NOC2LQ9Y3T9 749 aaKnown RBP15.2■□□□□ 0.02
LIMD1-203ENST00000465039 TTC3P53804 2025 aa15.19■□□□□ 0.02
LIMD1-203ENST00000465039 A0A087WZ62 844 aa15.19■□□□□ 0.02
LIMD1-203ENST00000465039 ZBBXA8MT70 800 aa15.19■□□□□ 0.02
LIMD1-203ENST00000465039 E9PMD0 336 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms