RNA–Protein interactions for RNA: ENST00000464833.1

CHRD-211, Transcript of chordin, humanhuman

TSL 5

Gene CHRD, Length 1,340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-211ENST00000464833 PADI6Q6TGC4 694 aa30.74■■■□□ 2.51
CHRD-211ENST00000464833 SYMPKQ92797 1274 aaKnown RBP30.74■■■□□ 2.51
CHRD-211ENST00000464833 CDK5RAP3Q96JB5 506 aa30.74■■■□□ 2.51
CHRD-211ENST00000464833 PLIN2Q99541 437 aa30.74■■■□□ 2.51
CHRD-211ENST00000464833 KRT85P78386 507 aa30.73■■■□□ 2.51
CHRD-211ENST00000464833 KARSQ15046 597 aaKnown RBP30.73■■■□□ 2.51
CHRD-211ENST00000464833 TSHZ1Q6ZSZ6 1077 aa30.73■■■□□ 2.51
CHRD-211ENST00000464833 OTOP2Q7RTS6 562 aa30.73■■■□□ 2.51
CHRD-211ENST00000464833 DBF4BQ8NFT6 615 aa30.73■■■□□ 2.51
CHRD-211ENST00000464833 TMEM40Q8WWA1 233 aa30.73■■■□□ 2.51
CHRD-211ENST00000464833 TCP11Q8WWU5 503 aa30.73■■■□□ 2.51
CHRD-211ENST00000464833 CALML4Q96GE6 196 aa30.73■■■□□ 2.51
CHRD-211ENST00000464833 AGO3Q9H9G7 860 aaKnown RBP30.73■■■□□ 2.51
CHRD-211ENST00000464833 CIZ1Q9ULV3 898 aaPredicted RBP30.73■■■□□ 2.51
CHRD-211ENST00000464833 GINS2Q9Y248 185 aa30.73■■■□□ 2.51
CHRD-211ENST00000464833 RBM19Q9Y4C8 960 aaKnown RBP30.73■■■□□ 2.51
CHRD-211ENST00000464833 MICAL3Q7RTP6 2002 aa30.73■■■□□ 2.51
CHRD-211ENST00000464833 CDC42EP1Q00587 391 aa30.73■■■□□ 2.51
CHRD-211ENST00000464833 AXDND1Q5T1B0 1012 aaPredicted RBP30.73■■■□□ 2.51
CHRD-211ENST00000464833 USP38Q8NB14 1042 aa30.73■■■□□ 2.51
CHRD-211ENST00000464833 LRRC15Q8TF66 581 aa30.73■■■□□ 2.51
CHRD-211ENST00000464833 PRPF31Q8WWY3 499 aaKnown RBP30.73■■■□□ 2.51
CHRD-211ENST00000464833 PSPC1Q8WXF1 523 aaKnown RBP30.73■■■□□ 2.51
CHRD-211ENST00000464833 RNPC3Q96LT9 517 aaKnown RBP30.73■■■□□ 2.51
CHRD-211ENST00000464833 OSMRQ99650 979 aa30.73■■■□□ 2.51
CHRD-211ENST00000464833 CUTAO60888 179 aa30.72■■■□□ 2.51
CHRD-211ENST00000464833 ACTN1P12814 892 aa30.72■■■□□ 2.51
CHRD-211ENST00000464833 CYP11B2P19099 503 aa30.72■■■□□ 2.51
CHRD-211ENST00000464833 RHPN2Q8IUC4 686 aa30.72■■■□□ 2.51
CHRD-211ENST00000464833 MCPH1Q8NEM0 835 aa30.72■■■□□ 2.51
CHRD-211ENST00000464833 SEPT8Q92599 483 aa30.72■■■□□ 2.51
CHRD-211ENST00000464833 ZNF668Q96K58 619 aaPredicted RBP30.72■■■□□ 2.51
CHRD-211ENST00000464833 IFIH1Q9BYX4 1025 aaKnown RBP30.72■■■□□ 2.51
CHRD-211ENST00000464833 CXXC1Q9P0U4 656 aaPredicted RBP30.72■■■□□ 2.51
CHRD-211ENST00000464833 COL4A3BPQ9Y5P4 624 aa30.72■■■□□ 2.51
CHRD-211ENST00000464833 PLCG1P19174 1290 aa30.71■■■□□ 2.51
CHRD-211ENST00000464833 NCLP19338 710 aaKnown RBP30.71■■■□□ 2.51
CHRD-211ENST00000464833 ARL2P36404 184 aa30.71■■■□□ 2.51
CHRD-211ENST00000464833 KSR1Q8IVT5 923 aa30.71■■■□□ 2.51
CHRD-211ENST00000464833 LEO1Q8WVC0 666 aaPredicted RBP30.71■■■□□ 2.51
CHRD-211ENST00000464833 BAIAP3O94812 1187 aa30.7■■■□□ 2.5
CHRD-211ENST00000464833 CD52P31358 61 aa30.7■■■□□ 2.5
CHRD-211ENST00000464833 LAMTOR4Q0VGL1 99 aa30.7■■■□□ 2.5
CHRD-211ENST00000464833 ZNF410Q86VK4 478 aa30.7■■■□□ 2.5
CHRD-211ENST00000464833 APBB2Q92870 758 aa30.7■■■□□ 2.5
CHRD-211ENST00000464833 BLOC1S4Q9NUP1 217 aa30.7■■■□□ 2.5
CHRD-211ENST00000464833 PCDHA7Q9UN72 937 aa30.7■■■□□ 2.5
CHRD-211ENST00000464833 NOC2LQ9Y3T9 749 aaKnown RBP30.7■■■□□ 2.5
CHRD-211ENST00000464833 TXLNAP40222 546 aa30.69■■■□□ 2.5
CHRD-211ENST00000464833 ME1P48163 572 aa30.69■■■□□ 2.5
CHRD-211ENST00000464833 SYT2Q8N9I0 419 aaPredicted RBP30.69■■■□□ 2.5
CHRD-211ENST00000464833 RASSF8Q8NHQ8 419 aa30.69■■■□□ 2.5
CHRD-211ENST00000464833 NLRP7Q8WX94 980 aa30.69■■■□□ 2.5
CHRD-211ENST00000464833 MTIF3Q9H2K0 278 aaKnown RBP30.69■■■□□ 2.5
CHRD-211ENST00000464833 GPRC5CQ9NQ84 441 aa30.69■■■□□ 2.5
CHRD-211ENST00000464833 LAMA2P24043 3122 aaKnown RBP30.69■■■□□ 2.5
CHRD-211ENST00000464833 A0A087WZ62 844 aa30.68■■■□□ 2.5
CHRD-211ENST00000464833 ABHD14A-ACY1A0A1B0GW23 586 aa30.68■■■□□ 2.5
CHRD-211ENST00000464833 ASAP2O43150 1006 aa30.68■■■□□ 2.5
CHRD-211ENST00000464833 DARSP14868 501 aaKnown RBP30.68■■■□□ 2.5
CHRD-211ENST00000464833 EIF4BP23588 611 aaKnown RBP30.68■■■□□ 2.5
CHRD-211ENST00000464833 SLC12A3P55017 1021 aa30.68■■■□□ 2.5
CHRD-211ENST00000464833 IKBKEQ14164 716 aa30.68■■■□□ 2.5
CHRD-211ENST00000464833 MXD4Q14582 209 aaPredicted RBP30.68■■■□□ 2.5
CHRD-211ENST00000464833 RINT1Q6NUQ1 792 aa30.68■■■□□ 2.5
CHRD-211ENST00000464833 SHC4Q6S5L8 630 aa30.68■■■□□ 2.5
CHRD-211ENST00000464833 ASAP3Q8TDY4 903 aa30.68■■■□□ 2.5
CHRD-211ENST00000464833 SPATA32Q96LK8 384 aa30.68■■■□□ 2.5
CHRD-211ENST00000464833 NLRP4Q96MN2 994 aa30.68■■■□□ 2.5
CHRD-211ENST00000464833 SCLT1Q96NL6 688 aa30.68■■■□□ 2.5
CHRD-211ENST00000464833 FDXACB1Q9BRP7 624 aaPredicted RBP30.68■■■□□ 2.5
CHRD-211ENST00000464833 RUSC1Q9BVN2 902 aa30.68■■■□□ 2.5
CHRD-211ENST00000464833 POLR3FQ9H1D9 316 aaPredicted RBP30.68■■■□□ 2.5
CHRD-211ENST00000464833 ERVK-5Q9HDB9 667 aa30.68■■■□□ 2.5
CHRD-211ENST00000464833 CCDC39Q9UFE4 941 aa30.68■■■□□ 2.5
CHRD-211ENST00000464833 PADI3Q9ULW8 664 aa30.68■■■□□ 2.5
CHRD-211ENST00000464833 LAMA3Q16787 3333 aa30.67■■■□□ 2.5
CHRD-211ENST00000464833 PLA2G4BP0C869 781 aa30.67■■■□□ 2.5
CHRD-211ENST00000464833 PAK2Q13177 524 aa30.67■■■□□ 2.5
CHRD-211ENST00000464833 C1orf186Q6ZWK4 172 aa30.67■■■□□ 2.5
CHRD-211ENST00000464833 MAEAQ7L5Y9 396 aa30.67■■■□□ 2.5
CHRD-211ENST00000464833 FAM228AQ86W67 206 aa30.67■■■□□ 2.5
CHRD-211ENST00000464833 SCAND2PQ9GZW5 306 aaPredicted RBP30.67■■■□□ 2.5
CHRD-211ENST00000464833 IFT122Q9HBG6 1241 aa30.67■■■□□ 2.5
CHRD-211ENST00000464833 PTPRSQ13332 1948 aa30.66■■■□□ 2.5
CHRD-211ENST00000464833 EFCAB14O75071 495 aa30.66■■■□□ 2.5
CHRD-211ENST00000464833 RPS6KA5O75582 802 aa30.66■■■□□ 2.5
CHRD-211ENST00000464833 GLRA2P23416 452 aa30.66■■■□□ 2.5
CHRD-211ENST00000464833 FAM102BQ5T8I3 360 aa30.66■■■□□ 2.5
CHRD-211ENST00000464833 RAD54LQ92698 747 aa30.66■■■□□ 2.5
CHRD-211ENST00000464833 GCOM2Q9BZD3 368 aaPredicted RBP30.66■■■□□ 2.5
CHRD-211ENST00000464833 A0A087X0B3 334 aa30.65■■■□□ 2.5
CHRD-211ENST00000464833 ZBBXA8MT70 800 aa30.65■■■□□ 2.5
CHRD-211ENST00000464833 WDR5P61964 334 aaKnown RBP30.65■■■□□ 2.5
CHRD-211ENST00000464833 LRIT3Q3SXY7 679 aa30.65■■■□□ 2.5
CHRD-211ENST00000464833 NAALADL2Q58DX5 795 aa30.65■■■□□ 2.5
CHRD-211ENST00000464833 STK17AQ9UEE5 414 aa30.65■■■□□ 2.5
CHRD-211ENST00000464833 ST3GAL5Q9UNP4 418 aa30.65■■■□□ 2.5
CHRD-211ENST00000464833 SSBP05455 408 aaKnown RBP eCLIP30.64■■■□□ 2.5
CHRD-211ENST00000464833 SRGAP2CP0DJJ0 459 aa30.64■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms