RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 TMEM110-MUSTN1A8MSY1 372 aa13.65□□□□□ -0.23
CLCNKA-204ENST00000464764 UBOX5O94941 541 aa13.65□□□□□ -0.23
CLCNKA-204ENST00000464764 GHRP10912 638 aa13.65□□□□□ -0.23
CLCNKA-204ENST00000464764 AKR1B1P15121 316 aa13.65□□□□□ -0.23
CLCNKA-204ENST00000464764 JAM2P57087 298 aa13.65□□□□□ -0.23
CLCNKA-204ENST00000464764 PTENP60484 403 aa13.65□□□□□ -0.23
CLCNKA-204ENST00000464764 CYP4A11Q02928 519 aa13.65□□□□□ -0.23
CLCNKA-204ENST00000464764 ORC2Q13416 577 aaPredicted RBP13.65□□□□□ -0.23
CLCNKA-204ENST00000464764 PPP2R5AQ15172 486 aa13.65□□□□□ -0.23
CLCNKA-204ENST00000464764 FOXR2Q6PJQ5 311 aa13.65□□□□□ -0.23
CLCNKA-204ENST00000464764 ARMC9Q7Z3E5 817 aa13.65□□□□□ -0.23
CLCNKA-204ENST00000464764 CATSPER3Q86XQ3 398 aa13.65□□□□□ -0.23
CLCNKA-204ENST00000464764 ANKS4BQ8N8V4 417 aa13.65□□□□□ -0.23
CLCNKA-204ENST00000464764 LINC00116Q8NCU8 138 aa13.65□□□□□ -0.23
CLCNKA-204ENST00000464764 NEK9Q8TD19 979 aa13.65□□□□□ -0.23
CLCNKA-204ENST00000464764 AGAP11Q8TF27 550 aa13.65□□□□□ -0.23
CLCNKA-204ENST00000464764 THAP2Q9H0W7 228 aa13.65□□□□□ -0.23
CLCNKA-204ENST00000464764 ATP6V0A4Q9HBG4 840 aa13.65□□□□□ -0.23
CLCNKA-204ENST00000464764 SLC12A4Q9UP95 1085 aa13.65□□□□□ -0.23
CLCNKA-204ENST00000464764 RPTORQ8N122 1335 aa13.65□□□□□ -0.23
CLCNKA-204ENST00000464764 KIAA0391O15091 583 aaKnown RBP13.64□□□□□ -0.23
CLCNKA-204ENST00000464764 ANP32DO95626 131 aa13.64□□□□□ -0.23
CLCNKA-204ENST00000464764 PLCG2P16885 1265 aa13.64□□□□□ -0.23
CLCNKA-204ENST00000464764 SLC8A1P32418 973 aa13.64□□□□□ -0.23
CLCNKA-204ENST00000464764 PPP4CP60510 307 aa13.64□□□□□ -0.23
CLCNKA-204ENST00000464764 PLS1Q14651 629 aa13.64□□□□□ -0.23
CLCNKA-204ENST00000464764 SEPT2Q15019 361 aa13.64□□□□□ -0.23
CLCNKA-204ENST00000464764 EDRF1Q3B7T1 1238 aa13.64□□□□□ -0.23
CLCNKA-204ENST00000464764 KIAA1755Q5JYT7 1200 aa13.64□□□□□ -0.23
CLCNKA-204ENST00000464764 TRPM8Q7Z2W7 1104 aa13.64□□□□□ -0.23
CLCNKA-204ENST00000464764 FRMD5Q7Z6J6 570 aa13.64□□□□□ -0.23
CLCNKA-204ENST00000464764 CPNE8Q86YQ8 564 aa13.64□□□□□ -0.23
CLCNKA-204ENST00000464764 ZC3H3Q8IXZ2 948 aaKnown RBP13.64□□□□□ -0.23
CLCNKA-204ENST00000464764 WDR66Q8TBY9 1149 aa13.64□□□□□ -0.23
CLCNKA-204ENST00000464764 MAGEC3Q8TD91 643 aa13.64□□□□□ -0.23
CLCNKA-204ENST00000464764 KRT35Q92764 455 aa13.64□□□□□ -0.23
CLCNKA-204ENST00000464764 PSTPIP2Q9H939 334 aa13.64□□□□□ -0.23
CLCNKA-204ENST00000464764 TRIM33Q9UPN9 1127 aa13.64□□□□□ -0.23
CLCNKA-204ENST00000464764 PHLPP1O60346 1717 aa13.64□□□□□ -0.23
CLCNKA-204ENST00000464764 COL22A1Q8NFW1 1626 aaPredicted RBP13.64□□□□□ -0.23
CLCNKA-204ENST00000464764 IRS2Q9Y4H2 1338 aa13.64□□□□□ -0.23
CLCNKA-204ENST00000464764 ANKRD63C9JTQ0 380 aa13.64□□□□□ -0.23
CLCNKA-204ENST00000464764 TAL1P17542 331 aaPredicted RBP13.64□□□□□ -0.23
CLCNKA-204ENST00000464764 TM4SF1P30408 202 aa13.64□□□□□ -0.23
CLCNKA-204ENST00000464764 RPL21P46778 160 aaKnown RBP13.64□□□□□ -0.23
CLCNKA-204ENST00000464764 HOOK3Q86VS8 718 aa13.64□□□□□ -0.23
CLCNKA-204ENST00000464764 CCDC25Q86WR0 208 aa13.64□□□□□ -0.23
CLCNKA-204ENST00000464764 SPICE1Q8N0Z3 855 aa13.64□□□□□ -0.23
CLCNKA-204ENST00000464764 TACO1Q9BSH4 297 aaKnown RBP13.64□□□□□ -0.23
CLCNKA-204ENST00000464764 NT5C3AQ9H0P0 336 aa13.64□□□□□ -0.23
CLCNKA-204ENST00000464764 MTMR4Q9NYA4 1195 aa13.64□□□□□ -0.23
CLCNKA-204ENST00000464764 PTPN22Q9Y2R2 807 aa13.64□□□□□ -0.23
CLCNKA-204ENST00000464764 THRAP3Q9Y2W1 955 aaKnown RBP13.64□□□□□ -0.23
CLCNKA-204ENST00000464764 TCRBV7S2A1N4TA0A589 114 aa13.63□□□□□ -0.23
CLCNKA-204ENST00000464764 NR3C1P04150 777 aa13.63□□□□□ -0.23
CLCNKA-204ENST00000464764 CLEC4GQ6UXB4 293 aa13.63□□□□□ -0.23
CLCNKA-204ENST00000464764 DPP8Q6V1X1 898 aaPredicted RBP13.63□□□□□ -0.23
CLCNKA-204ENST00000464764 VPS36Q86VN1 386 aa13.63□□□□□ -0.23
CLCNKA-204ENST00000464764 TAX1BP1Q86VP1 789 aa13.63□□□□□ -0.23
CLCNKA-204ENST00000464764 SYCE1Q8N0S2 351 aa13.63□□□□□ -0.23
CLCNKA-204ENST00000464764 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.63□□□□□ -0.23
CLCNKA-204ENST00000464764 LRRN2O75325 713 aa13.63□□□□□ -0.23
CLCNKA-204ENST00000464764 KCNJ1P48048 391 aa13.63□□□□□ -0.23
CLCNKA-204ENST00000464764 CLK2P49760 499 aaKnown RBP13.63□□□□□ -0.23
CLCNKA-204ENST00000464764 EIF3BP55884 814 aaKnown RBP13.63□□□□□ -0.23
CLCNKA-204ENST00000464764 SNAP25P60880 206 aa13.63□□□□□ -0.23
CLCNKA-204ENST00000464764 PPATQ06203 517 aa13.63□□□□□ -0.23
CLCNKA-204ENST00000464764 COG2Q14746 738 aa13.63□□□□□ -0.23
CLCNKA-204ENST00000464764 ARHGAP44Q17R89 818 aa13.63□□□□□ -0.23
CLCNKA-204ENST00000464764 TTC27Q6P3X3 843 aa13.63□□□□□ -0.23
CLCNKA-204ENST00000464764 SLC30A5Q8TAD4 765 aa13.63□□□□□ -0.23
CLCNKA-204ENST00000464764 CENPTQ96BT3 561 aa13.63□□□□□ -0.23
CLCNKA-204ENST00000464764 POP1Q99575 1024 aaKnown RBP13.63□□□□□ -0.23
CLCNKA-204ENST00000464764 RAB17Q9H0T7 212 aa13.63□□□□□ -0.23
CLCNKA-204ENST00000464764 ZNF287Q9HBT7 754 aa13.63□□□□□ -0.23
CLCNKA-204ENST00000464764 GRHL1Q9NZI5 618 aa13.63□□□□□ -0.23
CLCNKA-204ENST00000464764 SAMD15Q9P1V8 674 aa13.63□□□□□ -0.23
CLCNKA-204ENST00000464764 TRPC6Q9Y210 931 aa13.63□□□□□ -0.23
CLCNKA-204ENST00000464764 RTN2O75298 545 aa13.62□□□□□ -0.23
CLCNKA-204ENST00000464764 GCNT3O95395 438 aa13.62□□□□□ -0.23
CLCNKA-204ENST00000464764 DRAP1Q14919 205 aaPredicted RBP13.62□□□□□ -0.23
CLCNKA-204ENST00000464764 SLC10A5Q5PT55 438 aa13.62□□□□□ -0.23
CLCNKA-204ENST00000464764 HYIQ5T013 277 aa13.62□□□□□ -0.23
CLCNKA-204ENST00000464764 P2RX7Q99572 595 aaKnown RBP13.62□□□□□ -0.23
CLCNKA-204ENST00000464764 FGFR1OP2Q9NVK5 253 aa13.62□□□□□ -0.23
CLCNKA-204ENST00000464764 PNMA3Q9UL41 463 aa13.62□□□□□ -0.23
CLCNKA-204ENST00000464764 TRAF3IP3Q9Y228 551 aa13.62□□□□□ -0.23
CLCNKA-204ENST00000464764 STK38LQ9Y2H1 464 aa13.62□□□□□ -0.23
CLCNKA-204ENST00000464764 ASTN1O14525 1302 aa13.62□□□□□ -0.23
CLCNKA-204ENST00000464764 PNMA6FA0A0J9YX94 578 aa13.62□□□□□ -0.23
CLCNKA-204ENST00000464764 ASAP2O43150 1006 aa13.62□□□□□ -0.23
CLCNKA-204ENST00000464764 NUDT17P0C025 328 aa13.62□□□□□ -0.23
CLCNKA-204ENST00000464764 STAT1P42224 750 aa13.62□□□□□ -0.23
CLCNKA-204ENST00000464764 DDB1Q16531 1140 aa13.62□□□□□ -0.23
CLCNKA-204ENST00000464764 ZC2HC1CQ53FD0 456 aaPredicted RBP13.62□□□□□ -0.23
CLCNKA-204ENST00000464764 MAEAQ7L5Y9 396 aa13.62□□□□□ -0.23
CLCNKA-204ENST00000464764 UPP2O95045 317 aa13.62□□□□□ -0.23
CLCNKA-204ENST00000464764 TRIM49P0CI25 452 aa13.62□□□□□ -0.23
CLCNKA-204ENST00000464764 TRIM49CP0CI26 452 aa13.62□□□□□ -0.23
CLCNKA-204ENST00000464764 RARAP10276 462 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms