RNA–Protein interactions for RNA: ENST00000464451.5

SEC61A1-203, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-203ENST00000464451 FGFBP2Q9BYJ0 223 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 LACRTQ9GZZ8 138 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 ARHGAP20Q9P2F6 1191 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 VAV3Q9UKW4 847 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 FAM184BQ9ULE4 1060 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 SAR1BQ9Y6B6 198 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 ANO9A1A5B4 782 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 RCCD1A6NED2 376 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 SOWAHBA6NEL2 793 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 LRRC53A6NM62 1247 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 USO1O60763 962 aaKnown RBP13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 HMGCRP04035 888 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 HOXC6P09630 235 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 PSMC6P62333 389 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 RPS6P62753 249 aaKnown RBP13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 CYP27A1Q02318 531 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 CACNB1Q02641 598 aaPredicted RBP13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 DMTNQ08495 405 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 RAD51AP2Q09MP3 1159 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 KCNMA1Q12791 1236 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 ADAM9Q13443 819 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 UTP14CQ5TAP6 766 aaKnown RBP13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 TRIM59Q8IWR1 403 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 NELFCDQ8IXH7 590 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 HNRNPLLQ8WVV9 542 aaKnown RBP13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 BAP1Q92560 729 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 SYN2Q92777 582 aaPredicted RBP13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 ZNF333Q96JL9 665 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 FGD4Q96M96 766 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 IFIH1Q9BYX4 1025 aaKnown RBP13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 DEF6Q9H4E7 631 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 ZHX3Q9H4I2 956 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 ANKZF1Q9H8Y5 726 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 SLC5A4Q9NY91 659 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 CEP72Q9P209 647 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 RAB21Q9UL25 225 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 MRPL11Q9Y3B7 192 aaKnown RBP13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 ASTN1O14525 1302 aa13.28□□□□□ -0.28
SEC61A1-203ENST00000464451 BRCA2P51587 3418 aa13.28□□□□□ -0.28
SEC61A1-203ENST00000464451 MEIS1O00470 390 aa13.28□□□□□ -0.28
SEC61A1-203ENST00000464451 CETN3O15182 167 aa13.28□□□□□ -0.28
SEC61A1-203ENST00000464451 SEC31AO94979 1220 aaKnown RBP13.28□□□□□ -0.28
SEC61A1-203ENST00000464451 PLEKP08567 350 aaPredicted RBP13.28□□□□□ -0.28
SEC61A1-203ENST00000464451 PRKAR2AP13861 404 aaKnown RBP13.28□□□□□ -0.28
SEC61A1-203ENST00000464451 KIF11P52732 1056 aa13.28□□□□□ -0.28
SEC61A1-203ENST00000464451 CACNB2Q08289 660 aaPredicted RBP13.28□□□□□ -0.28
SEC61A1-203ENST00000464451 PDXDC1Q6P996 788 aa13.28□□□□□ -0.28
SEC61A1-203ENST00000464451 TXLNBQ8N3L3 684 aa13.28□□□□□ -0.28
SEC61A1-203ENST00000464451 SECISBP2LQ93073 1101 aaKnown RBP13.28□□□□□ -0.28
SEC61A1-203ENST00000464451 UNC93B1Q9H1C4 597 aa13.28□□□□□ -0.28
SEC61A1-203ENST00000464451 PNMA2Q9UL42 364 aa13.28□□□□□ -0.28
SEC61A1-203ENST00000464451 TFR2Q9UP52 801 aa13.28□□□□□ -0.28
SEC61A1-203ENST00000464451 PCDHA13Q9Y5I0 950 aa13.28□□□□□ -0.28
SEC61A1-203ENST00000464451 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.28□□□□□ -0.28
SEC61A1-203ENST00000464451 ZNFX1Q9P2E3 1918 aaKnown RBP13.28□□□□□ -0.28
SEC61A1-203ENST00000464451 PFASO15067 1338 aa13.28□□□□□ -0.28
SEC61A1-203ENST00000464451 IGLV3-22A0A075B6J6 115 aa13.27□□□□□ -0.28
SEC61A1-203ENST00000464451 SSU72P8A0A1W2PR75 194 aa13.27□□□□□ -0.28
SEC61A1-203ENST00000464451 GCOM1H8Y6P7 765 aaPredicted RBP13.27□□□□□ -0.28
SEC61A1-203ENST00000464451 ENC1O14682 589 aa13.27□□□□□ -0.28
SEC61A1-203ENST00000464451 ZNF263O14978 683 aa13.27□□□□□ -0.28
SEC61A1-203ENST00000464451 AKR1B10O60218 316 aa13.27□□□□□ -0.28
SEC61A1-203ENST00000464451 ATP1A1P05023 1023 aaKnown RBP13.27□□□□□ -0.28
SEC61A1-203ENST00000464451 POLR2MP0CAP2 368 aa13.27□□□□□ -0.28
SEC61A1-203ENST00000464451 CCND3P30281 292 aaPredicted RBP13.27□□□□□ -0.28
SEC61A1-203ENST00000464451 EIF4A3P38919 411 aaKnown RBP13.27□□□□□ -0.28
SEC61A1-203ENST00000464451 MAPK8IP2Q13387 824 aaPredicted RBP13.27□□□□□ -0.28
SEC61A1-203ENST00000464451 FAM133AQ8N9E0 248 aa13.27□□□□□ -0.28
SEC61A1-203ENST00000464451 TRIM58Q8NG06 486 aa13.27□□□□□ -0.28
SEC61A1-203ENST00000464451 CYP2W1Q8TAV3 490 aa13.27□□□□□ -0.28
SEC61A1-203ENST00000464451 ARMC5Q96C12 935 aa13.27□□□□□ -0.28
SEC61A1-203ENST00000464451 RPGRIP1Q96KN7 1286 aa13.27□□□□□ -0.28
SEC61A1-203ENST00000464451 EIF2AK1Q9BQI3 630 aaKnown RBP13.27□□□□□ -0.28
SEC61A1-203ENST00000464451 REEP2Q9BRK0 252 aa13.27□□□□□ -0.28
SEC61A1-203ENST00000464451 EHMT1Q9H9B1 1298 aa13.27□□□□□ -0.28
SEC61A1-203ENST00000464451 COL20A1Q9P218 1284 aa13.27□□□□□ -0.28
SEC61A1-203ENST00000464451 TRAF3IP3Q9Y228 551 aa13.27□□□□□ -0.28
SEC61A1-203ENST00000464451 ZNF236Q9UL36 1845 aa13.27□□□□□ -0.28
SEC61A1-203ENST00000464451 ERLIN1O75477 346 aa13.27□□□□□ -0.29
SEC61A1-203ENST00000464451 EYA4O95677 639 aa13.27□□□□□ -0.29
SEC61A1-203ENST00000464451 CCL5P13501 91 aa13.27□□□□□ -0.29
SEC61A1-203ENST00000464451 CNGA1P29973 690 aa13.27□□□□□ -0.29
SEC61A1-203ENST00000464451 PLA2G4AP47712 749 aa13.27□□□□□ -0.29
SEC61A1-203ENST00000464451 SOX10P56693 466 aa13.27□□□□□ -0.29
SEC61A1-203ENST00000464451 UBXN2AP68543 259 aa13.27□□□□□ -0.29
SEC61A1-203ENST00000464451 KNOP1Q1ED39 458 aaKnown RBP13.27□□□□□ -0.29
SEC61A1-203ENST00000464451 MFSD14CQ5VZR4 134 aa13.27□□□□□ -0.29
SEC61A1-203ENST00000464451 EPM2AIP1Q7L775 607 aaPredicted RBP13.27□□□□□ -0.29
SEC61A1-203ENST00000464451 TINF2Q9BSI4 451 aa13.27□□□□□ -0.29
SEC61A1-203ENST00000464451 RNF208Q9H0X6 261 aa13.27□□□□□ -0.29
SEC61A1-203ENST00000464451 HDAC6Q9UBN7 1215 aa13.27□□□□□ -0.29
SEC61A1-203ENST00000464451 MACROD2A1Z1Q3 448 aa13.26□□□□□ -0.29
SEC61A1-203ENST00000464451 PDXKO00764 312 aa13.26□□□□□ -0.29
SEC61A1-203ENST00000464451 TFRCP02786 760 aaKnown RBP13.26□□□□□ -0.29
SEC61A1-203ENST00000464451 NR2F2P24468 414 aa13.26□□□□□ -0.29
SEC61A1-203ENST00000464451 CKAP4Q07065 602 aaKnown RBP13.26□□□□□ -0.29
SEC61A1-203ENST00000464451 LONRF2Q1L5Z9 754 aa13.26□□□□□ -0.29
SEC61A1-203ENST00000464451 OLFML2BQ68BL8 750 aa13.26□□□□□ -0.29
SEC61A1-203ENST00000464451 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.26□□□□□ -0.29
SEC61A1-203ENST00000464451 EEPD1Q7L9B9 569 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms