RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 ANO5Q75V66 913 aa23.08■■□□□ 1.29
PDLIM4-205ENST00000463615 KLHL23Q8NBE8 558 aa23.08■■□□□ 1.29
PDLIM4-205ENST00000463615 NSUN7Q8NE18 718 aaKnown RBP23.08■■□□□ 1.29
PDLIM4-205ENST00000463615 ATP6V0A4Q9HBG4 840 aa23.08■■□□□ 1.29
PDLIM4-205ENST00000463615 ALG13Q9NP73 1137 aaKnown RBP23.08■■□□□ 1.29
PDLIM4-205ENST00000463615 HOXA2O43364 376 aa23.07■■□□□ 1.28
PDLIM4-205ENST00000463615 LARGE1O95461 756 aa23.07■■□□□ 1.28
PDLIM4-205ENST00000463615 LTBRP36941 435 aa23.07■■□□□ 1.28
PDLIM4-205ENST00000463615 QARSP47897 775 aaKnown RBP23.07■■□□□ 1.28
PDLIM4-205ENST00000463615 UBE3AQ05086 875 aa23.07■■□□□ 1.28
PDLIM4-205ENST00000463615 HYAL1Q12794 435 aa23.07■■□□□ 1.28
PDLIM4-205ENST00000463615 DRP2Q13474 957 aa23.07■■□□□ 1.28
PDLIM4-205ENST00000463615 MTERF2Q49AM1 385 aa23.07■■□□□ 1.28
PDLIM4-205ENST00000463615 EARS2Q5JPH6 523 aaKnown RBP23.07■■□□□ 1.28
PDLIM4-205ENST00000463615 PTCRAQ6ISU1 281 aaPredicted RBP23.07■■□□□ 1.28
PDLIM4-205ENST00000463615 FAM178BQ8IXR5 827 aa23.07■■□□□ 1.28
PDLIM4-205ENST00000463615 JPH2Q9BR39 696 aaPredicted RBP23.07■■□□□ 1.28
PDLIM4-205ENST00000463615 AAASQ9NRG9 546 aa23.07■■□□□ 1.28
PDLIM4-205ENST00000463615 TBKBP1A7MCY6 615 aa23.06■■□□□ 1.28
PDLIM4-205ENST00000463615 CCNT1O60563 726 aaKnown RBP23.06■■□□□ 1.28
PDLIM4-205ENST00000463615 P4HBP07237 508 aaKnown RBP23.06■■□□□ 1.28
PDLIM4-205ENST00000463615 ZSCAN20P17040 1043 aaPredicted RBP23.06■■□□□ 1.28
PDLIM4-205ENST00000463615 DNAJB1P25685 340 aa23.06■■□□□ 1.28
PDLIM4-205ENST00000463615 KRT2P35908 639 aa23.06■■□□□ 1.28
PDLIM4-205ENST00000463615 DNM2P50570 870 aa23.06■■□□□ 1.28
PDLIM4-205ENST00000463615 NEK4P51957 841 aa23.06■■□□□ 1.28
PDLIM4-205ENST00000463615 EPHA7Q15375 998 aa23.06■■□□□ 1.28
PDLIM4-205ENST00000463615 CSPP1Q1MSJ5 1256 aa23.06■■□□□ 1.28
PDLIM4-205ENST00000463615 ZNF410Q86VK4 478 aa23.06■■□□□ 1.28
PDLIM4-205ENST00000463615 NECAB1Q8N987 351 aa23.06■■□□□ 1.28
PDLIM4-205ENST00000463615 TRAIPQ9BWF2 469 aa23.06■■□□□ 1.28
PDLIM4-205ENST00000463615 TMEM117Q9H0C3 514 aa23.06■■□□□ 1.28
PDLIM4-205ENST00000463615 BRMS1Q9HCU9 246 aa23.06■■□□□ 1.28
PDLIM4-205ENST00000463615 CHST12Q9NRB3 414 aa23.06■■□□□ 1.28
PDLIM4-205ENST00000463615 PCDHB12Q9Y5F1 795 aa23.06■■□□□ 1.28
PDLIM4-205ENST00000463615 A0A0U1RQF3 1178 aa23.05■■□□□ 1.28
PDLIM4-205ENST00000463615 TMEM150BA6NC51 233 aa23.05■■□□□ 1.28
PDLIM4-205ENST00000463615 DDX11L8A8MPP1 907 aa23.05■■□□□ 1.28
PDLIM4-205ENST00000463615 SPIRE1Q08AE8 756 aa23.05■■□□□ 1.28
PDLIM4-205ENST00000463615 ECHDC2Q86YB7 292 aa23.05■■□□□ 1.28
PDLIM4-205ENST00000463615 C4orf19Q8IY42 314 aa23.05■■□□□ 1.28
PDLIM4-205ENST00000463615 EXOC8Q8IYI6 725 aa23.05■■□□□ 1.28
PDLIM4-205ENST00000463615 SLFN12Q8IYM2 578 aa23.05■■□□□ 1.28
PDLIM4-205ENST00000463615 PPP2R3CQ969Q6 453 aa23.05■■□□□ 1.28
PDLIM4-205ENST00000463615 GCOM2Q9BZD3 368 aaPredicted RBP23.05■■□□□ 1.28
PDLIM4-205ENST00000463615 CWH43Q9H720 699 aa23.05■■□□□ 1.28
PDLIM4-205ENST00000463615 CYP26B1Q9NR63 512 aa23.05■■□□□ 1.28
PDLIM4-205ENST00000463615 RNF19AQ9NV58 838 aa23.05■■□□□ 1.28
PDLIM4-205ENST00000463615 H3BQ06 376 aaPredicted RBP23.04■■□□□ 1.28
PDLIM4-205ENST00000463615 EOMESO95936 686 aa23.04■■□□□ 1.28
PDLIM4-205ENST00000463615 IL9P15248 144 aa23.04■■□□□ 1.28
PDLIM4-205ENST00000463615 NR5A1Q13285 461 aa23.04■■□□□ 1.28
PDLIM4-205ENST00000463615 ZNF598Q86UK7 904 aaKnown RBP23.04■■□□□ 1.28
PDLIM4-205ENST00000463615 POF1BQ8WVV4 589 aa23.04■■□□□ 1.28
PDLIM4-205ENST00000463615 NLRP7Q8WX94 980 aa23.04■■□□□ 1.28
PDLIM4-205ENST00000463615 RSPH1Q8WYR4 309 aa23.04■■□□□ 1.28
PDLIM4-205ENST00000463615 CASD1Q96PB1 797 aa23.04■■□□□ 1.28
PDLIM4-205ENST00000463615 C1QTNF1Q9BXJ1 281 aa23.04■■□□□ 1.28
PDLIM4-205ENST00000463615 TYW1Q9NV66 732 aaKnown RBP23.04■■□□□ 1.28
PDLIM4-205ENST00000463615 CLDND1Q9NY35 253 aa23.04■■□□□ 1.28
PDLIM4-205ENST00000463615 DACT1Q9NYF0 836 aa23.04■■□□□ 1.28
PDLIM4-205ENST00000463615 FAM50BQ9Y247 325 aa23.04■■□□□ 1.28
PDLIM4-205ENST00000463615 DTNBO60941 627 aa23.03■■□□□ 1.28
PDLIM4-205ENST00000463615 SEC24BO95487 1268 aa23.03■■□□□ 1.28
PDLIM4-205ENST00000463615 FGFR1P11362 822 aa23.03■■□□□ 1.28
PDLIM4-205ENST00000463615 LAG3P18627 525 aa23.03■■□□□ 1.28
PDLIM4-205ENST00000463615 ADAM15Q13444 863 aa23.03■■□□□ 1.28
PDLIM4-205ENST00000463615 POTEDQ86YR6 584 aa23.03■■□□□ 1.28
PDLIM4-205ENST00000463615 INO80BQ9C086 356 aaPredicted RBP23.03■■□□□ 1.28
PDLIM4-205ENST00000463615 DHX33Q9H6R0 707 aaKnown RBP23.03■■□□□ 1.28
PDLIM4-205ENST00000463615 CD320Q9NPF0 282 aa23.03■■□□□ 1.28
PDLIM4-205ENST00000463615 SUCLA2Q9P2R7 463 aaPredicted RBP23.03■■□□□ 1.28
PDLIM4-205ENST00000463615 WRAP73Q9P2S5 460 aaPredicted RBP23.03■■□□□ 1.28
PDLIM4-205ENST00000463615 PRKAG3Q9UGI9 489 aa23.03■■□□□ 1.28
PDLIM4-205ENST00000463615 LZTS1Q9Y250 596 aa23.03■■□□□ 1.28
PDLIM4-205ENST00000463615 FAM205CA6NFA0 338 aa23.02■■□□□ 1.28
PDLIM4-205ENST00000463615 COLGALT1Q8NBJ5 622 aa23.02■■□□□ 1.28
PDLIM4-205ENST00000463615 ZNF668Q96K58 619 aaPredicted RBP23.02■■□□□ 1.28
PDLIM4-205ENST00000463615 SCLT1Q96NL6 688 aa23.02■■□□□ 1.28
PDLIM4-205ENST00000463615 SH2D3AQ9BRG2 576 aa23.02■■□□□ 1.28
PDLIM4-205ENST00000463615 A0A087WZ62 844 aa23.01■■□□□ 1.27
PDLIM4-205ENST00000463615 FGF18O76093 207 aa23.01■■□□□ 1.27
PDLIM4-205ENST00000463615 BAG4O95429 457 aaKnown RBP23.01■■□□□ 1.27
PDLIM4-205ENST00000463615 SFPQP23246 707 aaKnown RBP eCLIP23.01■■□□□ 1.27
PDLIM4-205ENST00000463615 IRS1P35568 1242 aa23.01■■□□□ 1.27
PDLIM4-205ENST00000463615 RFC5P40937 340 aa23.01■■□□□ 1.27
PDLIM4-205ENST00000463615 PLCB3Q01970 1234 aa23.01■■□□□ 1.27
PDLIM4-205ENST00000463615 ST3GAL1Q11201 340 aa23.01■■□□□ 1.27
PDLIM4-205ENST00000463615 PLA2G4FQ68DD2 849 aa23.01■■□□□ 1.27
PDLIM4-205ENST00000463615 PDE12Q6L8Q7 609 aaKnown RBP23.01■■□□□ 1.27
PDLIM4-205ENST00000463615 LRRC43Q8N309 656 aa23.01■■□□□ 1.27
PDLIM4-205ENST00000463615 EFHBQ8N7U6 833 aa23.01■■□□□ 1.27
PDLIM4-205ENST00000463615 SLC7A3Q8WY07 619 aa23.01■■□□□ 1.27
PDLIM4-205ENST00000463615 FDXACB1Q9BRP7 624 aaPredicted RBP23.01■■□□□ 1.27
PDLIM4-205ENST00000463615 LXNQ9BS40 222 aa23.01■■□□□ 1.27
PDLIM4-205ENST00000463615 PLXNA4Q9HCM2 1894 aa23■■□□□ 1.27
PDLIM4-205ENST00000463615 BTBD18B2RXH4 712 aa23■■□□□ 1.27
PDLIM4-205ENST00000463615 GAS2O43903 313 aaKnown RBP23■■□□□ 1.27
PDLIM4-205ENST00000463615 JAK2O60674 1132 aa23■■□□□ 1.27
PDLIM4-205ENST00000463615 ATF7P17544 494 aaPredicted RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms