RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 TMEM40Q8WWA1 233 aa12.66□□□□□ -0.38
SSR3-202ENST00000463503 CASP10Q92851 521 aa12.66□□□□□ -0.38
SSR3-202ENST00000463503 TMX3Q96JJ7 454 aa12.66□□□□□ -0.38
SSR3-202ENST00000463503 CELF4Q9BZC1 486 aaKnown RBP12.66□□□□□ -0.38
SSR3-202ENST00000463503 RGS18Q9NS28 235 aa12.66□□□□□ -0.38
SSR3-202ENST00000463503 DLL3Q9NYJ7 618 aa12.66□□□□□ -0.38
SSR3-202ENST00000463503 PCDHB7Q9Y5E2 793 aa12.66□□□□□ -0.38
SSR3-202ENST00000463503 PCDHA2Q9Y5H9 948 aa12.66□□□□□ -0.38
SSR3-202ENST00000463503 ASPMQ8IZT6 3477 aa12.65□□□□□ -0.38
SSR3-202ENST00000463503 CNTNAP5Q8WYK1 1306 aa12.65□□□□□ -0.38
SSR3-202ENST00000463503 STK36Q9NRP7 1315 aa12.65□□□□□ -0.38
SSR3-202ENST00000463503 CDKL5O76039 1030 aa12.65□□□□□ -0.38
SSR3-202ENST00000463503 ITGB5P18084 799 aa12.65□□□□□ -0.38
SSR3-202ENST00000463503 RXRAP19793 462 aa12.65□□□□□ -0.38
SSR3-202ENST00000463503 IBSPP21815 317 aaPredicted RBP12.65□□□□□ -0.38
SSR3-202ENST00000463503 ADD1P35611 737 aaKnown RBP12.65□□□□□ -0.38
SSR3-202ENST00000463503 PBX3P40426 434 aa12.65□□□□□ -0.38
SSR3-202ENST00000463503 ST3GAL1Q11201 340 aa12.65□□□□□ -0.38
SSR3-202ENST00000463503 TRAF1Q13077 416 aa12.65□□□□□ -0.38
SSR3-202ENST00000463503 TPRNQ4KMQ1 711 aa12.65□□□□□ -0.38
SSR3-202ENST00000463503 KIAA1841Q6NSI8 718 aa12.65□□□□□ -0.38
SSR3-202ENST00000463503 CES5AQ6NT32 575 aa12.65□□□□□ -0.38
SSR3-202ENST00000463503 XRRA1Q6P2D8 792 aa12.65□□□□□ -0.38
SSR3-202ENST00000463503 LRRC55Q6ZSA7 311 aa12.65□□□□□ -0.38
SSR3-202ENST00000463503 KIAA2013Q8IYS2 634 aa12.65□□□□□ -0.38
SSR3-202ENST00000463503 FAM177A1Q8N128 213 aaPredicted RBP12.65□□□□□ -0.38
SSR3-202ENST00000463503 DTWD2Q8NBA8 298 aa12.65□□□□□ -0.38
SSR3-202ENST00000463503 GIMAP8Q8ND71 665 aaPredicted RBP12.65□□□□□ -0.38
SSR3-202ENST00000463503 FLCNQ8NFG4 579 aa12.65□□□□□ -0.38
SSR3-202ENST00000463503 SEPT1Q8WYJ6 367 aa12.65□□□□□ -0.38
SSR3-202ENST00000463503 GLG1Q92896 1179 aa12.65□□□□□ -0.38
SSR3-202ENST00000463503 GPRASP2Q96D09 838 aa12.65□□□□□ -0.38
SSR3-202ENST00000463503 INTS4Q96HW7 963 aaKnown RBP12.65□□□□□ -0.38
SSR3-202ENST00000463503 RNF26Q9BY78 433 aaPredicted RBP12.65□□□□□ -0.38
SSR3-202ENST00000463503 SMARCAD1Q9H4L7 1026 aa12.65□□□□□ -0.38
SSR3-202ENST00000463503 NGRNQ9NPE2 291 aaKnown RBP12.65□□□□□ -0.38
SSR3-202ENST00000463503 RNF19AQ9NV58 838 aa12.65□□□□□ -0.38
SSR3-202ENST00000463503 FRYQ5TBA9 3013 aa12.64□□□□□ -0.39
SSR3-202ENST00000463503 PNMA6FA0A0J9YX94 578 aa12.64□□□□□ -0.39
SSR3-202ENST00000463503 C2orf71A6NGG8 1288 aa12.64□□□□□ -0.39
SSR3-202ENST00000463503 RRN3P2A6NIE6 340 aa12.64□□□□□ -0.39
SSR3-202ENST00000463503 hCG_1984214I3L0E3 225 aa12.64□□□□□ -0.39
SSR3-202ENST00000463503 M0QZ92 97 aa12.64□□□□□ -0.39
SSR3-202ENST00000463503 PIK3CDO00329 1044 aa12.64□□□□□ -0.39
SSR3-202ENST00000463503 MEIS2O14770 477 aa12.64□□□□□ -0.39
SSR3-202ENST00000463503 PRPF3O43395 683 aaKnown RBP12.64□□□□□ -0.39
SSR3-202ENST00000463503 PLEKHA8P1O95397 391 aa12.64□□□□□ -0.39
SSR3-202ENST00000463503 LMNAP02545 664 aaKnown RBP12.64□□□□□ -0.39
SSR3-202ENST00000463503 MTHFRP42898 656 aa12.64□□□□□ -0.39
SSR3-202ENST00000463503 CCT2P78371 535 aaKnown RBP12.64□□□□□ -0.39
SSR3-202ENST00000463503 KRT76Q01546 638 aa12.64□□□□□ -0.39
SSR3-202ENST00000463503 PUM1Q14671 1186 aaKnown RBP eCLIP12.64□□□□□ -0.398e-9■□□□□ 10.1
SSR3-202ENST00000463503 USP17L6PQ6QN14 398 aa12.64□□□□□ -0.39
SSR3-202ENST00000463503 SLC24A5Q71RS6 500 aa12.64□□□□□ -0.39
SSR3-202ENST00000463503 TEX2Q8IWB9 1127 aa12.64□□□□□ -0.39
SSR3-202ENST00000463503 HSCBQ8IWL3 235 aa12.64□□□□□ -0.39
SSR3-202ENST00000463503 ZNF713Q8N859 430 aaPredicted RBP12.64□□□□□ -0.39
SSR3-202ENST00000463503 SMARCC2Q8TAQ2 1214 aa12.64□□□□□ -0.39
SSR3-202ENST00000463503 ADAM2Q99965 735 aa12.64□□□□□ -0.39
SSR3-202ENST00000463503 LARP6Q9BRS8 491 aaKnown RBP12.64□□□□□ -0.39
SSR3-202ENST00000463503 C1orf112Q9NSG2 853 aa12.64□□□□□ -0.39
SSR3-202ENST00000463503 TMEM161AQ9NX61 479 aa12.64□□□□□ -0.39
SSR3-202ENST00000463503 LIMD1Q9UGP4 676 aa12.64□□□□□ -0.39
SSR3-202ENST00000463503 DUSP12Q9UNI6 340 aa12.64□□□□□ -0.39
SSR3-202ENST00000463503 USTQ9Y2C2 406 aa12.64□□□□□ -0.39
SSR3-202ENST00000463503 NOC2LQ9Y3T9 749 aaKnown RBP12.64□□□□□ -0.39
SSR3-202ENST00000463503 COL4A3Q01955 1670 aa12.64□□□□□ -0.39
SSR3-202ENST00000463503 DOCK6Q96HP0 2047 aa12.63□□□□□ -0.39
SSR3-202ENST00000463503 SMIM35A0A1B0GVV1 85 aa12.63□□□□□ -0.39
SSR3-202ENST00000463503 CPLX1O14810 134 aa12.63□□□□□ -0.39
SSR3-202ENST00000463503 CLASP2O75122 1294 aaKnown RBP12.63□□□□□ -0.39
SSR3-202ENST00000463503 CTDNEP1O95476 244 aa12.63□□□□□ -0.39
SSR3-202ENST00000463503 EOMESO95936 686 aa12.63□□□□□ -0.39
SSR3-202ENST00000463503 NFX1Q12986 1120 aaKnown RBP12.63□□□□□ -0.39
SSR3-202ENST00000463503 PLCB4Q15147 1175 aa12.63□□□□□ -0.39
SSR3-202ENST00000463503 RARS2Q5T160 578 aaKnown RBP12.63□□□□□ -0.39
SSR3-202ENST00000463503 KANK3Q6NY19 840 aa12.63□□□□□ -0.39
SSR3-202ENST00000463503 KCNT2Q6UVM3 1135 aa12.63□□□□□ -0.39
SSR3-202ENST00000463503 NLRX1Q86UT6 975 aa12.63□□□□□ -0.39
SSR3-202ENST00000463503 C12orf76Q8N812 135 aaPredicted RBP12.63□□□□□ -0.39
SSR3-202ENST00000463503 NSUN7Q8NE18 718 aaKnown RBP12.63□□□□□ -0.39
SSR3-202ENST00000463503 SEMA4AQ9H3S1 761 aa12.63□□□□□ -0.39
SSR3-202ENST00000463503 CDHR5Q9HBB8 845 aa12.63□□□□□ -0.39
SSR3-202ENST00000463503 NCOA5Q9HCD5 579 aaKnown RBP12.63□□□□□ -0.39
SSR3-202ENST00000463503 NAP1L2Q9ULW6 460 aaPredicted RBP12.63□□□□□ -0.39
SSR3-202ENST00000463503 R4GN57 208 aa12.63□□□□□ -0.39
SSR3-202ENST00000463503 DENND3A2RUS2 1198 aa12.62□□□□□ -0.39
SSR3-202ENST00000463503 PPM1AP35813 382 aa12.62□□□□□ -0.39
SSR3-202ENST00000463503 FAM189BP81408 668 aa12.62□□□□□ -0.39
SSR3-202ENST00000463503 HMGN5P82970 282 aaKnown RBP12.62□□□□□ -0.39
SSR3-202ENST00000463503 STK3Q13188 491 aa12.62□□□□□ -0.39
SSR3-202ENST00000463503 BECN1Q14457 450 aa12.62□□□□□ -0.39
SSR3-202ENST00000463503 SMC1AQ14683 1233 aaKnown RBP12.62□□□□□ -0.39
SSR3-202ENST00000463503 MTHFD1LQ6UB35 978 aa12.62□□□□□ -0.39
SSR3-202ENST00000463503 PPP4R3CPQ6ZMV5 832 aa12.62□□□□□ -0.39
SSR3-202ENST00000463503 FAM43BQ6ZT52 329 aaPredicted RBP12.62□□□□□ -0.39
SSR3-202ENST00000463503 RAB11FIP4Q86YS3 637 aa12.62□□□□□ -0.39
SSR3-202ENST00000463503 TRIM22Q8IYM9 498 aa12.62□□□□□ -0.39
SSR3-202ENST00000463503 LRRC43Q8N309 656 aa12.62□□□□□ -0.39
SSR3-202ENST00000463503 MRPL43Q8N983 215 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms