RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 TRANK1O15050 2925 aa19.72■□□□□ 0.75
VPS52-214ENST00000463486 RPS6KA5O75582 802 aa19.72■□□□□ 0.75
VPS52-214ENST00000463486 DGAT1O75907 488 aa19.72■□□□□ 0.75
VPS52-214ENST00000463486 GJB5O95377 273 aa19.72■□□□□ 0.75
VPS52-214ENST00000463486 BMP15O95972 392 aa19.72■□□□□ 0.75
VPS52-214ENST00000463486 ZSCAN22P10073 491 aaPredicted RBP19.72■□□□□ 0.75
VPS52-214ENST00000463486 EIF4BP23588 611 aaKnown RBP19.72■□□□□ 0.75
VPS52-214ENST00000463486 ARL2P36404 184 aa19.72■□□□□ 0.75
VPS52-214ENST00000463486 KCNJ6P48051 423 aa19.72■□□□□ 0.75
VPS52-214ENST00000463486 DNM2P50570 870 aa19.72■□□□□ 0.75
VPS52-214ENST00000463486 KCNK18Q7Z418 384 aa19.72■□□□□ 0.75
VPS52-214ENST00000463486 TOP1MTQ969P6 601 aa19.72■□□□□ 0.75
VPS52-214ENST00000463486 RAB34Q9BZG1 259 aa19.72■□□□□ 0.75
VPS52-214ENST00000463486 SEMA6BQ9H3T3 888 aa19.72■□□□□ 0.75
VPS52-214ENST00000463486 IFT122Q9HBG6 1241 aa19.72■□□□□ 0.75
VPS52-214ENST00000463486 KIAA1024Q9UPX6 916 aa19.72■□□□□ 0.75
VPS52-214ENST00000463486 ZDHHC9Q9Y397 364 aa19.72■□□□□ 0.75
VPS52-214ENST00000463486 STK24Q9Y6E0 443 aa19.72■□□□□ 0.75
VPS52-214ENST00000463486 MORC2Q9Y6X9 1032 aaPredicted RBP19.72■□□□□ 0.75
VPS52-214ENST00000463486 A0A087WZ62 844 aa19.71■□□□□ 0.75
VPS52-214ENST00000463486 GAS2O43903 313 aaKnown RBP19.71■□□□□ 0.75
VPS52-214ENST00000463486 CSDE1O75534 798 aaKnown RBP19.71■□□□□ 0.75
VPS52-214ENST00000463486 ARHGEF15O94989 841 aa19.71■□□□□ 0.75
VPS52-214ENST00000463486 HSP90AA1P07900 732 aaKnown RBP19.71■□□□□ 0.75
VPS52-214ENST00000463486 PDIA4P13667 645 aaKnown RBP19.71■□□□□ 0.75
VPS52-214ENST00000463486 CDC42EP1Q00587 391 aa19.71■□□□□ 0.75
VPS52-214ENST00000463486 LAMTOR4Q0VGL1 99 aa19.71■□□□□ 0.75
VPS52-214ENST00000463486 PAK2Q13177 524 aa19.71■□□□□ 0.75
VPS52-214ENST00000463486 DSC3Q14574 896 aa19.71■□□□□ 0.75
VPS52-214ENST00000463486 KRT79Q5XKE5 535 aa19.71■□□□□ 0.75
VPS52-214ENST00000463486 RHPN2Q8IUC4 686 aa19.71■□□□□ 0.75
VPS52-214ENST00000463486 TIFAQ96CG3 184 aa19.71■□□□□ 0.75
VPS52-214ENST00000463486 FDXACB1Q9BRP7 624 aaPredicted RBP19.71■□□□□ 0.75
VPS52-214ENST00000463486 TSPYL2Q9H2G4 693 aaPredicted RBP19.71■□□□□ 0.75
VPS52-214ENST00000463486 DDX19AQ9NUU7 478 aaKnown RBP19.71■□□□□ 0.75
VPS52-214ENST00000463486 COL4A3BPQ9Y5P4 624 aa19.71■□□□□ 0.75
VPS52-214ENST00000463486 TTC3P53804 2025 aa19.7■□□□□ 0.74
VPS52-214ENST00000463486 TMEM265A0A087WTH1 108 aa19.7■□□□□ 0.74
VPS52-214ENST00000463486 NASPP49321 788 aaPredicted RBP19.7■□□□□ 0.74
VPS52-214ENST00000463486 HTRA4P83105 476 aaPredicted RBP19.7■□□□□ 0.74
VPS52-214ENST00000463486 GRB10Q13322 594 aa19.7■□□□□ 0.74
VPS52-214ENST00000463486 SLC39A14Q15043 492 aa19.7■□□□□ 0.74
VPS52-214ENST00000463486 RAB30Q15771 203 aa19.7■□□□□ 0.74
VPS52-214ENST00000463486 FAM43BQ6ZT52 329 aaPredicted RBP19.7■□□□□ 0.74
VPS52-214ENST00000463486 ZNF410Q86VK4 478 aa19.7■□□□□ 0.74
VPS52-214ENST00000463486 ASAP3Q8TDY4 903 aa19.7■□□□□ 0.74
VPS52-214ENST00000463486 LRRC15Q8TF66 581 aa19.7■□□□□ 0.74
VPS52-214ENST00000463486 AK8Q96MA6 479 aa19.7■□□□□ 0.74
VPS52-214ENST00000463486 MTRQ99707 1265 aa19.7■□□□□ 0.74
VPS52-214ENST00000463486 FTHL17Q9BXU8 183 aa19.7■□□□□ 0.74
VPS52-214ENST00000463486 NKX2-4Q9H2Z4 354 aa19.7■□□□□ 0.74
VPS52-214ENST00000463486 MTMR10Q9NXD2 777 aa19.7■□□□□ 0.74
VPS52-214ENST00000463486 FBXO2Q9UK22 296 aaPredicted RBP19.7■□□□□ 0.74
VPS52-214ENST00000463486 LCHNA4D1U4 455 aa19.69■□□□□ 0.74
VPS52-214ENST00000463486 E9PMD0 336 aa19.69■□□□□ 0.74
VPS52-214ENST00000463486 GPR182O15218 404 aa19.69■□□□□ 0.74
VPS52-214ENST00000463486 F13A1P00488 732 aa19.69■□□□□ 0.74
VPS52-214ENST00000463486 AMHP03971 560 aa19.69■□□□□ 0.74
VPS52-214ENST00000463486 NFX1Q12986 1120 aaKnown RBP19.69■□□□□ 0.74
VPS52-214ENST00000463486 PADI6Q6TGC4 694 aa19.69■□□□□ 0.74
VPS52-214ENST00000463486 MYOCDQ8IZQ8 938 aa19.69■□□□□ 0.74
VPS52-214ENST00000463486 DEFB123Q8N688 67 aa19.69■□□□□ 0.74
VPS52-214ENST00000463486 TCP11Q8WWU5 503 aa19.69■□□□□ 0.74
VPS52-214ENST00000463486 NLRP7Q8WX94 980 aa19.69■□□□□ 0.74
VPS52-214ENST00000463486 PSPC1Q8WXF1 523 aaKnown RBP19.69■□□□□ 0.74
VPS52-214ENST00000463486 MINDY3Q9H8M7 445 aa19.69■□□□□ 0.74
VPS52-214ENST00000463486 ATP6V0A4Q9HBG4 840 aa19.69■□□□□ 0.74
VPS52-214ENST00000463486 MSRAQ9UJ68 235 aa19.69■□□□□ 0.74
VPS52-214ENST00000463486 SRPRBQ9Y5M8 271 aaKnown RBP19.69■□□□□ 0.74
VPS52-214ENST00000463486 ASAP2O43150 1006 aa19.68■□□□□ 0.74
VPS52-214ENST00000463486 USO1O60763 962 aaKnown RBP19.68■□□□□ 0.74
VPS52-214ENST00000463486 EYA4O95677 639 aa19.68■□□□□ 0.74
VPS52-214ENST00000463486 CYP11B2P19099 503 aa19.68■□□□□ 0.74
VPS52-214ENST00000463486 FGFR4P22455 802 aa19.68■□□□□ 0.74
VPS52-214ENST00000463486 MARCKSP29966 332 aaPredicted RBP19.68■□□□□ 0.74
VPS52-214ENST00000463486 LONP1P36776 959 aaKnown RBP19.68■□□□□ 0.74
VPS52-214ENST00000463486 FAM189BP81408 668 aa19.68■□□□□ 0.74
VPS52-214ENST00000463486 CEBPZQ03701 1054 aaKnown RBP19.68■□□□□ 0.74
VPS52-214ENST00000463486 TMEM119Q4V9L6 283 aa19.68■□□□□ 0.74
VPS52-214ENST00000463486 FOXD4L5Q5VV16 416 aaPredicted RBP19.68■□□□□ 0.74
VPS52-214ENST00000463486 USP49Q70CQ1 688 aa19.68■□□□□ 0.74
VPS52-214ENST00000463486 FOXD4L4Q8WXT5 416 aaPredicted RBP19.68■□□□□ 0.74
VPS52-214ENST00000463486 GUCD1Q96NT3 240 aa19.68■□□□□ 0.74
VPS52-214ENST00000463486 RAD9AQ99638 391 aa19.68■□□□□ 0.74
VPS52-214ENST00000463486 GCOM2Q9BZD3 368 aaPredicted RBP19.68■□□□□ 0.74
VPS52-214ENST00000463486 BHMT2Q9H2M3 363 aa19.68■□□□□ 0.74
VPS52-214ENST00000463486 RC3H2Q9HBD1 1191 aaKnown RBP19.68■□□□□ 0.74
VPS52-214ENST00000463486 GPRC5CQ9NQ84 441 aa19.68■□□□□ 0.74
VPS52-214ENST00000463486 RGS18Q9NS28 235 aa19.68■□□□□ 0.74
VPS52-214ENST00000463486 COL4A6Q14031 1691 aa19.68■□□□□ 0.74
VPS52-214ENST00000463486 C9IYK1 514 aa19.67■□□□□ 0.74
VPS52-214ENST00000463486 TLL1O43897 1013 aa19.67■□□□□ 0.74
VPS52-214ENST00000463486 BRD1O95696 1058 aa19.67■□□□□ 0.74
VPS52-214ENST00000463486 CA3P07451 260 aa19.67■□□□□ 0.74
VPS52-214ENST00000463486 GLRA2P23416 452 aa19.67■□□□□ 0.74
VPS52-214ENST00000463486 POU5F1BQ06416 359 aa19.67■□□□□ 0.74
VPS52-214ENST00000463486 FAM117BQ6P1L5 589 aa19.67■□□□□ 0.74
VPS52-214ENST00000463486 SPRED2Q7Z698 418 aa19.67■□□□□ 0.74
VPS52-214ENST00000463486 IFNLR1Q8IU57 520 aaPredicted RBP19.67■□□□□ 0.74
VPS52-214ENST00000463486 KCTD17Q8N5Z5 321 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms