RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 SKOR2Q2VWA4 1001 aaPredicted RBP15.4■□□□□ 0.06
PHACTR4-203ENST00000463428 IER5Q5VY09 327 aa15.4■□□□□ 0.06
PHACTR4-203ENST00000463428 ANKRD33Q7Z3H0 272 aa15.4■□□□□ 0.06
PHACTR4-203ENST00000463428 RETREG2Q8NC44 543 aa15.4■□□□□ 0.06
PHACTR4-203ENST00000463428 ERCC4Q92889 916 aaPredicted RBP15.4■□□□□ 0.06
PHACTR4-203ENST00000463428 WNT8BQ93098 351 aa15.4■□□□□ 0.06
PHACTR4-203ENST00000463428 TMEM143Q96AN5 459 aa15.4■□□□□ 0.06
PHACTR4-203ENST00000463428 TRPV6Q9H1D0 765 aa15.4■□□□□ 0.06
PHACTR4-203ENST00000463428 TMEM63CQ9P1W3 806 aa15.4■□□□□ 0.06
PHACTR4-203ENST00000463428 PVALEFA0A1B0GWK0 134 aa15.39■□□□□ 0.05
PHACTR4-203ENST00000463428 SFI1A8K8P3 1242 aa15.39■□□□□ 0.05
PHACTR4-203ENST00000463428 RTP1P59025 263 aa15.39■□□□□ 0.05
PHACTR4-203ENST00000463428 EHHADHQ08426 723 aa15.39■□□□□ 0.05
PHACTR4-203ENST00000463428 PTK7Q13308 1070 aa15.39■□□□□ 0.05
PHACTR4-203ENST00000463428 TRIM71Q2Q1W2 868 aaKnown RBP15.39■□□□□ 0.05
PHACTR4-203ENST00000463428 RPAINQ86UA6 219 aa15.39■□□□□ 0.05
PHACTR4-203ENST00000463428 METTL13Q8N6R0 699 aa15.39■□□□□ 0.05
PHACTR4-203ENST00000463428 ASAP3Q8TDY4 903 aa15.39■□□□□ 0.05
PHACTR4-203ENST00000463428 TCP11Q8WWU5 503 aa15.39■□□□□ 0.05
PHACTR4-203ENST00000463428 BSNDQ8WZ55 320 aa15.39■□□□□ 0.05
PHACTR4-203ENST00000463428 DHX38Q92620 1227 aaKnown RBP15.39■□□□□ 0.05
PHACTR4-203ENST00000463428 CCDC34Q96HJ3 373 aa15.39■□□□□ 0.05
PHACTR4-203ENST00000463428 NUP62CLQ9H1M0 184 aa15.39■□□□□ 0.05
PHACTR4-203ENST00000463428 PCDHA5Q9Y5H7 936 aa15.39■□□□□ 0.05
PHACTR4-203ENST00000463428 ALPK3Q96L96 1907 aa15.38■□□□□ 0.05
PHACTR4-203ENST00000463428 GLRA2P23416 452 aa15.38■□□□□ 0.05
PHACTR4-203ENST00000463428 TMOD1P28289 359 aa15.38■□□□□ 0.05
PHACTR4-203ENST00000463428 ASIC1P78348 528 aa15.38■□□□□ 0.05
PHACTR4-203ENST00000463428 LRRC26Q2I0M4 334 aa15.38■□□□□ 0.05
PHACTR4-203ENST00000463428 FAM102BQ5T8I3 360 aa15.38■□□□□ 0.05
PHACTR4-203ENST00000463428 NT5DC1Q5TFE4 455 aa15.38■□□□□ 0.05
PHACTR4-203ENST00000463428 TAF2Q6P1X5 1199 aa15.38■□□□□ 0.05
PHACTR4-203ENST00000463428 RBM43Q6ZSC3 357 aaKnown RBP15.38■□□□□ 0.05
PHACTR4-203ENST00000463428 UNC13DQ70J99 1090 aa15.38■□□□□ 0.05
PHACTR4-203ENST00000463428 TNS4Q8IZW8 715 aa15.38■□□□□ 0.05
PHACTR4-203ENST00000463428 DNAJB3Q8WWF6 145 aa15.38■□□□□ 0.05
PHACTR4-203ENST00000463428 PRPF31Q8WWY3 499 aaKnown RBP15.38■□□□□ 0.05
PHACTR4-203ENST00000463428 KIFAP3Q92845 792 aa15.38■□□□□ 0.05
PHACTR4-203ENST00000463428 TOX2Q96NM4 488 aa15.38■□□□□ 0.05
PHACTR4-203ENST00000463428 FIZ1Q96SL8 496 aa15.38■□□□□ 0.05
PHACTR4-203ENST00000463428 POLR3FQ9H1D9 316 aaPredicted RBP15.38■□□□□ 0.05
PHACTR4-203ENST00000463428 SUCLA2Q9P2R7 463 aaPredicted RBP15.38■□□□□ 0.05
PHACTR4-203ENST00000463428 DNAH12Q6ZR08 3092 aa15.37■□□□□ 0.05
PHACTR4-203ENST00000463428 RPN1P04843 607 aaKnown RBP15.37■□□□□ 0.05
PHACTR4-203ENST00000463428 KRT18P05783 430 aaKnown RBP15.37■□□□□ 0.05
PHACTR4-203ENST00000463428 DNM2P50570 870 aa15.37■□□□□ 0.05
PHACTR4-203ENST00000463428 TLE2Q04725 743 aa15.37■□□□□ 0.05
PHACTR4-203ENST00000463428 TRIM60Q495X7 471 aa15.37■□□□□ 0.05
PHACTR4-203ENST00000463428 CCDC183Q5T5S1 534 aa15.37■□□□□ 0.05
PHACTR4-203ENST00000463428 CAVIN1Q6NZI2 390 aaKnown RBP15.37■□□□□ 0.05
PHACTR4-203ENST00000463428 NME8Q8N427 588 aa15.37■□□□□ 0.05
PHACTR4-203ENST00000463428 PSPC1Q8WXF1 523 aaKnown RBP15.37■□□□□ 0.05
PHACTR4-203ENST00000463428 DRC1Q96MC2 740 aa15.37■□□□□ 0.05
PHACTR4-203ENST00000463428 NTPCRQ9BSD7 190 aaKnown RBP15.37■□□□□ 0.05
PHACTR4-203ENST00000463428 C17orf75Q9HAS0 396 aa15.37■□□□□ 0.05
PHACTR4-203ENST00000463428 PANK4Q9NVE7 773 aa15.37■□□□□ 0.05
PHACTR4-203ENST00000463428 KIAA1468Q9P260 1216 aa15.37■□□□□ 0.05
PHACTR4-203ENST00000463428 HOOK1Q9UJC3 728 aaKnown RBP15.37■□□□□ 0.05
PHACTR4-203ENST00000463428 MROH7Q68CQ1 1323 aa15.37■□□□□ 0.05
PHACTR4-203ENST00000463428 ASAP2O43150 1006 aa15.36■□□□□ 0.05
PHACTR4-203ENST00000463428 FAM13AO94988 1023 aa15.36■□□□□ 0.05
PHACTR4-203ENST00000463428 VTNP04004 478 aa15.36■□□□□ 0.05
PHACTR4-203ENST00000463428 PLS3P13797 630 aa15.36■□□□□ 0.05
PHACTR4-203ENST00000463428 IDEP14735 1019 aa15.36■□□□□ 0.05
PHACTR4-203ENST00000463428 RBL2Q08999 1139 aa15.36■□□□□ 0.05
PHACTR4-203ENST00000463428 FAAP100Q0VG06 881 aa15.36■□□□□ 0.05
PHACTR4-203ENST00000463428 LAMTOR4Q0VGL1 99 aa15.36■□□□□ 0.05
PHACTR4-203ENST00000463428 COASYQ13057 564 aa15.36■□□□□ 0.05
PHACTR4-203ENST00000463428 MXD4Q14582 209 aaPredicted RBP15.36■□□□□ 0.05
PHACTR4-203ENST00000463428 KCNB1Q14721 858 aa15.36■□□□□ 0.05
PHACTR4-203ENST00000463428 KMT5BQ4FZB7 885 aa15.36■□□□□ 0.05
PHACTR4-203ENST00000463428 KSR1Q8IVT5 923 aa15.36■□□□□ 0.05
PHACTR4-203ENST00000463428 CCDC65Q8IXS2 484 aa15.36■□□□□ 0.05
PHACTR4-203ENST00000463428 GSDMAQ96QA5 445 aa15.36■□□□□ 0.05
PHACTR4-203ENST00000463428 FAM49AQ9H0Q0 323 aaPredicted RBP15.36■□□□□ 0.05
PHACTR4-203ENST00000463428 PARVGQ9HBI0 331 aa15.36■□□□□ 0.05
PHACTR4-203ENST00000463428 COL4A3BPQ9Y5P4 624 aa15.36■□□□□ 0.05
PHACTR4-203ENST00000463428 CCDC85CA6NKD9 419 aa15.35■□□□□ 0.05
PHACTR4-203ENST00000463428 PQBP1O60828 265 aaKnown RBP15.35■□□□□ 0.05
PHACTR4-203ENST00000463428 TBCAO75347 108 aaKnown RBP15.35■□□□□ 0.05
PHACTR4-203ENST00000463428 GPR32O75388 356 aa15.35■□□□□ 0.05
PHACTR4-203ENST00000463428 RHOBTB3O94955 611 aa15.35■□□□□ 0.05
PHACTR4-203ENST00000463428 GAP43P17677 238 aa15.35■□□□□ 0.05
PHACTR4-203ENST00000463428 NPTX2P47972 431 aa15.35■□□□□ 0.05
PHACTR4-203ENST00000463428 GPC3P51654 580 aa15.35■□□□□ 0.05
PHACTR4-203ENST00000463428 PEX3P56589 373 aa15.35■□□□□ 0.05
PHACTR4-203ENST00000463428 POU5F1BQ06416 359 aa15.35■□□□□ 0.05
PHACTR4-203ENST00000463428 MGAT3Q09327 533 aa15.35■□□□□ 0.05
PHACTR4-203ENST00000463428 CAPSQ13938 189 aa15.35■□□□□ 0.05
PHACTR4-203ENST00000463428 SFR1Q86XK3 245 aa15.35■□□□□ 0.05
PHACTR4-203ENST00000463428 RHPN2Q8IUC4 686 aa15.35■□□□□ 0.05
PHACTR4-203ENST00000463428 MYCT1Q8N699 235 aa15.35■□□□□ 0.05
PHACTR4-203ENST00000463428 SPIRE2Q8WWL2 714 aa15.35■□□□□ 0.05
PHACTR4-203ENST00000463428 SMARCE1Q969G3 411 aa15.35■□□□□ 0.05
PHACTR4-203ENST00000463428 ADAMTS10Q9H324 1103 aa15.35■□□□□ 0.05
PHACTR4-203ENST00000463428 OLFML3Q9NRN5 406 aa15.35■□□□□ 0.05
PHACTR4-203ENST00000463428 LARSQ9P2J5 1176 aaKnown RBP15.35■□□□□ 0.05
PHACTR4-203ENST00000463428 SEL1LQ9UBV2 794 aa15.35■□□□□ 0.05
PHACTR4-203ENST00000463428 AKT3Q9Y243 479 aa15.35■□□□□ 0.05
PHACTR4-203ENST00000463428 SIP14410 1827 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms