RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 GTF3C6Q969F1 213 aa24.9■■□□□ 1.58
PDLIM7-206ENST00000463411 KCNMB3Q9NPA1 279 aa24.9■■□□□ 1.58
PDLIM7-206ENST00000463411 GJB4Q9NTQ9 266 aa24.9■■□□□ 1.58
PDLIM7-206ENST00000463411 FAM50BQ9Y247 325 aa24.9■■□□□ 1.58
PDLIM7-206ENST00000463411 PCDHB12Q9Y5F1 795 aa24.9■■□□□ 1.58
PDLIM7-206ENST00000463411 BDP1A6H8Y1 2624 aa24.89■■□□□ 1.58
PDLIM7-206ENST00000463411 DDX11L8A8MPP1 907 aa24.89■■□□□ 1.58
PDLIM7-206ENST00000463411 H3BQ06 376 aaPredicted RBP24.89■■□□□ 1.58
PDLIM7-206ENST00000463411 TBX3O15119 743 aa24.89■■□□□ 1.58
PDLIM7-206ENST00000463411 HOXA2O43364 376 aa24.89■■□□□ 1.58
PDLIM7-206ENST00000463411 ITGB1P05556 798 aa24.89■■□□□ 1.58
PDLIM7-206ENST00000463411 DARSP14868 501 aaKnown RBP24.89■■□□□ 1.58
PDLIM7-206ENST00000463411 DSC3Q14574 896 aa24.89■■□□□ 1.58
PDLIM7-206ENST00000463411 COL19A1Q14993 1142 aa24.89■■□□□ 1.58
PDLIM7-206ENST00000463411 ME3Q16798 604 aa24.89■■□□□ 1.58
PDLIM7-206ENST00000463411 NECAB1Q8N987 351 aa24.89■■□□□ 1.58
PDLIM7-206ENST00000463411 OXER1Q8TDS5 423 aa24.89■■□□□ 1.58
PDLIM7-206ENST00000463411 ZNF668Q96K58 619 aaPredicted RBP24.89■■□□□ 1.58
PDLIM7-206ENST00000463411 JPH2Q9BR39 696 aaPredicted RBP24.89■■□□□ 1.58
PDLIM7-206ENST00000463411 PLXNA4Q9HCM2 1894 aa24.88■■□□□ 1.57
PDLIM7-206ENST00000463411 QARSP47897 775 aaKnown RBP24.88■■□□□ 1.57
PDLIM7-206ENST00000463411 NEK4P51957 841 aa24.88■■□□□ 1.57
PDLIM7-206ENST00000463411 FAM102BQ5T8I3 360 aa24.88■■□□□ 1.57
PDLIM7-206ENST00000463411 ABI1Q8IZP0 508 aa24.88■■□□□ 1.57
PDLIM7-206ENST00000463411 TBC1D32Q96NH3 1257 aa24.88■■□□□ 1.57
PDLIM7-206ENST00000463411 GCOM2Q9BZD3 368 aaPredicted RBP24.88■■□□□ 1.57
PDLIM7-206ENST00000463411 VAV3Q9UKW4 847 aa24.88■■□□□ 1.57
PDLIM7-206ENST00000463411 TMEM150BA6NC51 233 aa24.87■■□□□ 1.57
PDLIM7-206ENST00000463411 DTNBO60941 627 aa24.87■■□□□ 1.57
PDLIM7-206ENST00000463411 FGFR1P11362 822 aa24.87■■□□□ 1.57
PDLIM7-206ENST00000463411 FAM189BP81408 668 aa24.87■■□□□ 1.57
PDLIM7-206ENST00000463411 TRIM29Q14134 588 aa24.87■■□□□ 1.57
PDLIM7-206ENST00000463411 CSPP1Q1MSJ5 1256 aa24.87■■□□□ 1.57
PDLIM7-206ENST00000463411 POF1BQ8WVV4 589 aa24.87■■□□□ 1.57
PDLIM7-206ENST00000463411 C1QTNF1Q9BXJ1 281 aa24.87■■□□□ 1.57
PDLIM7-206ENST00000463411 STBD1O95210 358 aa24.86■■□□□ 1.57
PDLIM7-206ENST00000463411 BAG4O95429 457 aaKnown RBP24.86■■□□□ 1.57
PDLIM7-206ENST00000463411 LARGE1O95461 756 aa24.86■■□□□ 1.57
PDLIM7-206ENST00000463411 IL9P15248 144 aa24.86■■□□□ 1.57
PDLIM7-206ENST00000463411 HYAL1Q12794 435 aa24.86■■□□□ 1.57
PDLIM7-206ENST00000463411 POTEDQ86YR6 584 aa24.86■■□□□ 1.57
PDLIM7-206ENST00000463411 SLFN12Q8IYM2 578 aa24.86■■□□□ 1.57
PDLIM7-206ENST00000463411 SPPL3Q8TCT6 385 aa24.86■■□□□ 1.57
PDLIM7-206ENST00000463411 SH2D3AQ9BRG2 576 aa24.86■■□□□ 1.57
PDLIM7-206ENST00000463411 TMEM117Q9H0C3 514 aa24.86■■□□□ 1.57
PDLIM7-206ENST00000463411 DACT1Q9NYF0 836 aa24.86■■□□□ 1.57
PDLIM7-206ENST00000463411 IGKV6-21A0A0C4DH24 114 aa24.85■■□□□ 1.57
PDLIM7-206ENST00000463411 GRXCR2A6NFK2 248 aa24.85■■□□□ 1.57
PDLIM7-206ENST00000463411 EML1O00423 815 aa24.85■■□□□ 1.57
PDLIM7-206ENST00000463411 MAFO75444 373 aaPredicted RBP24.85■■□□□ 1.57
PDLIM7-206ENST00000463411 P4HBP07237 508 aaKnown RBP24.85■■□□□ 1.57
PDLIM7-206ENST00000463411 FDPSP14324 419 aaKnown RBP24.85■■□□□ 1.57
PDLIM7-206ENST00000463411 LAG3P18627 525 aa24.85■■□□□ 1.57
PDLIM7-206ENST00000463411 SFPQP23246 707 aaKnown RBP eCLIP24.85■■□□□ 1.57
PDLIM7-206ENST00000463411 UBE3AQ05086 875 aa24.85■■□□□ 1.57
PDLIM7-206ENST00000463411 DRP2Q13474 957 aa24.85■■□□□ 1.57
PDLIM7-206ENST00000463411 ANO5Q75V66 913 aa24.85■■□□□ 1.57
PDLIM7-206ENST00000463411 ZNF410Q86VK4 478 aa24.85■■□□□ 1.57
PDLIM7-206ENST00000463411 EXOC8Q8IYI6 725 aa24.85■■□□□ 1.57
PDLIM7-206ENST00000463411 THNSL1Q8IYQ7 743 aa24.85■■□□□ 1.57
PDLIM7-206ENST00000463411 NSUN7Q8NE18 718 aaKnown RBP24.85■■□□□ 1.57
PDLIM7-206ENST00000463411 SLC7A3Q8WY07 619 aa24.85■■□□□ 1.57
PDLIM7-206ENST00000463411 CEP89Q96ST8 783 aa24.85■■□□□ 1.57
PDLIM7-206ENST00000463411 INO80BQ9C086 356 aaPredicted RBP24.85■■□□□ 1.57
PDLIM7-206ENST00000463411 IGFLR1Q9H665 355 aa24.85■■□□□ 1.57
PDLIM7-206ENST00000463411 CYP26B1Q9NR63 512 aa24.85■■□□□ 1.57
PDLIM7-206ENST00000463411 SUCLA2Q9P2R7 463 aaPredicted RBP24.85■■□□□ 1.57
PDLIM7-206ENST00000463411 PPME1Q9Y570 386 aa24.85■■□□□ 1.57
PDLIM7-206ENST00000463411 MYO7AQ13402 2215 aa24.85■■□□□ 1.57
PDLIM7-206ENST00000463411 DNAJB1P25685 340 aa24.84■■□□□ 1.57
PDLIM7-206ENST00000463411 NR5A1Q13285 461 aa24.84■■□□□ 1.57
PDLIM7-206ENST00000463411 CAMK1Q14012 370 aa24.84■■□□□ 1.57
PDLIM7-206ENST00000463411 PLA2G4FQ68DD2 849 aa24.84■■□□□ 1.57
PDLIM7-206ENST00000463411 NCAPH2Q6IBW4 605 aa24.84■■□□□ 1.57
PDLIM7-206ENST00000463411 ECHDC2Q86YB7 292 aa24.84■■□□□ 1.57
PDLIM7-206ENST00000463411 RHPN2Q8IUC4 686 aa24.84■■□□□ 1.57
PDLIM7-206ENST00000463411 FAM178BQ8IXR5 827 aa24.84■■□□□ 1.57
PDLIM7-206ENST00000463411 LRRC43Q8N309 656 aa24.84■■□□□ 1.57
PDLIM7-206ENST00000463411 COLGALT1Q8NBJ5 622 aa24.84■■□□□ 1.57
PDLIM7-206ENST00000463411 RNF169Q8NCN4 708 aa24.84■■□□□ 1.57
PDLIM7-206ENST00000463411 TYW1Q9NV66 732 aaKnown RBP24.84■■□□□ 1.57
PDLIM7-206ENST00000463411 FGFR4P22455 802 aa24.83■■□□□ 1.57
PDLIM7-206ENST00000463411 SSTR3P32745 418 aaPredicted RBP24.83■■□□□ 1.57
PDLIM7-206ENST00000463411 POLGP54098 1239 aaPredicted RBP24.83■■□□□ 1.57
PDLIM7-206ENST00000463411 EPHA7Q15375 998 aa24.83■■□□□ 1.57
PDLIM7-206ENST00000463411 CTC1Q2NKJ3 1217 aa24.83■■□□□ 1.57
PDLIM7-206ENST00000463411 EARS2Q5JPH6 523 aaKnown RBP24.83■■□□□ 1.57
PDLIM7-206ENST00000463411 HAS1Q92839 578 aa24.83■■□□□ 1.57
PDLIM7-206ENST00000463411 LXNQ9BS40 222 aa24.83■■□□□ 1.57
PDLIM7-206ENST00000463411 CHST12Q9NRB3 414 aa24.83■■□□□ 1.57
PDLIM7-206ENST00000463411 ARID2Q68CP9 1835 aa24.82■■□□□ 1.56
PDLIM7-206ENST00000463411 A0A087WZ62 844 aa24.82■■□□□ 1.56
PDLIM7-206ENST00000463411 FGF18O76093 207 aa24.82■■□□□ 1.56
PDLIM7-206ENST00000463411 MICAL1Q8TDZ2 1067 aa24.82■■□□□ 1.56
PDLIM7-206ENST00000463411 CEP170P1Q96L14 293 aa24.82■■□□□ 1.56
PDLIM7-206ENST00000463411 NLRP4Q96MN2 994 aa24.82■■□□□ 1.56
PDLIM7-206ENST00000463411 FDXACB1Q9BRP7 624 aaPredicted RBP24.82■■□□□ 1.56
PDLIM7-206ENST00000463411 TLR9Q9NR96 1032 aa24.82■■□□□ 1.56
PDLIM7-206ENST00000463411 A0A0U1RQF3 1178 aa24.81■■□□□ 1.56
PDLIM7-206ENST00000463411 FAM205CA6NFA0 338 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms