RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 FAM155BO75949 473 aa3.67□□□□□ -1.82
SMC4-203ENST00000462668 SEC24DO94855 1032 aaPredicted RBP3.67□□□□□ -1.82
SMC4-203ENST00000462668 ELNP15502 786 aa3.67□□□□□ -1.82
SMC4-203ENST00000462668 COPB2P35606 906 aa3.67□□□□□ -1.82
SMC4-203ENST00000462668 GPR15P49685 360 aa3.67□□□□□ -1.82
SMC4-203ENST00000462668 HK3P52790 923 aa3.67□□□□□ -1.82
SMC4-203ENST00000462668 TRIM25Q14258 630 aaKnown RBP3.67□□□□□ -1.82
SMC4-203ENST00000462668 CWF19L1Q69YN2 538 aaKnown RBP3.67□□□□□ -1.82
SMC4-203ENST00000462668 SSBP4Q9BWG4 385 aaPredicted RBP3.67□□□□□ -1.82
SMC4-203ENST00000462668 PIDD1Q9HB75 910 aa3.67□□□□□ -1.82
SMC4-203ENST00000462668 FBXO2Q9UK22 296 aaPredicted RBP3.67□□□□□ -1.82
SMC4-203ENST00000462668 FAM90A27PA6NNH2 459 aa3.67□□□□□ -1.82
SMC4-203ENST00000462668 PRR33A8MZF0 331 aa3.67□□□□□ -1.82
SMC4-203ENST00000462668 MAFKO60675 156 aa3.67□□□□□ -1.82
SMC4-203ENST00000462668 MPIG6BO95866 241 aa3.67□□□□□ -1.82
SMC4-203ENST00000462668 PRLP01236 227 aa3.67□□□□□ -1.82
SMC4-203ENST00000462668 ITGA5P08648 1049 aa3.67□□□□□ -1.82
SMC4-203ENST00000462668 DHRS4L1P0CG22 281 aa3.67□□□□□ -1.82
SMC4-203ENST00000462668 CHKAP35790 457 aa3.67□□□□□ -1.82
SMC4-203ENST00000462668 ST5P78524 1137 aa3.67□□□□□ -1.82
SMC4-203ENST00000462668 PPP3CAQ08209 521 aa3.67□□□□□ -1.82
SMC4-203ENST00000462668 DAG1Q14118 895 aa3.67□□□□□ -1.82
SMC4-203ENST00000462668 PTK2BQ14289 1009 aa3.67□□□□□ -1.82
SMC4-203ENST00000462668 LLGL1Q15334 1064 aa3.67□□□□□ -1.82
SMC4-203ENST00000462668 KIAA0753Q2KHM9 967 aa3.67□□□□□ -1.82
SMC4-203ENST00000462668 WDR78Q5VTH9 848 aa3.67□□□□□ -1.82
SMC4-203ENST00000462668 SPATA1Q5VX52 437 aa3.67□□□□□ -1.82
SMC4-203ENST00000462668 ACAD11Q709F0 780 aa3.67□□□□□ -1.82
SMC4-203ENST00000462668 DYMQ7RTS9 669 aa3.67□□□□□ -1.82
SMC4-203ENST00000462668 SESTD1Q86VW0 696 aa3.67□□□□□ -1.82
SMC4-203ENST00000462668 HERC6Q8IVU3 1022 aa3.67□□□□□ -1.82
SMC4-203ENST00000462668 UBXN10Q96LJ8 280 aa3.67□□□□□ -1.82
SMC4-203ENST00000462668 IFT122Q9HBG6 1241 aa3.67□□□□□ -1.82
SMC4-203ENST00000462668 PICK1Q9NRD5 415 aa3.67□□□□□ -1.82
SMC4-203ENST00000462668 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.67□□□□□ -1.823e-7■■□□□ 12.9
SMC4-203ENST00000462668 PRSS50Q9UI38 385 aa3.67□□□□□ -1.82
SMC4-203ENST00000462668 MSRAQ9UJ68 235 aa3.67□□□□□ -1.82
SMC4-203ENST00000462668 PCDHGB6Q9Y5F9 930 aa3.67□□□□□ -1.82
SMC4-203ENST00000462668 hCG_1642624A0A1W2PR95 340 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 CCER2I3L3R5 266 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 BUB1BO60566 1050 aaPredicted RBP3.66□□□□□ -1.82
SMC4-203ENST00000462668 RNGTTO60942 597 aaKnown RBP3.66□□□□□ -1.82
SMC4-203ENST00000462668 CSTBP04080 98 aaKnown RBP3.66□□□□□ -1.82
SMC4-203ENST00000462668 SERPINF1P36955 418 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 RAB1AP62820 205 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 AOC3Q16853 763 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 CCDC149Q6ZUS6 474 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 GRAMD1CQ8IYS0 662 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 LENG1Q96BZ8 264 aaPredicted RBP3.66□□□□□ -1.82
SMC4-203ENST00000462668 MRGPRX1Q96LB2 322 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 LSM14BQ9BX40 385 aaKnown RBP3.66□□□□□ -1.82
SMC4-203ENST00000462668 VPS11Q9H270 941 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 CNTD2Q9H8S5 307 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 SEMA3GQ9NS98 782 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 RTEL1Q9NZ71 1219 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 CCDC39Q9UFE4 941 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 ZC3H7BQ9UGR2 993 aaKnown RBP3.66□□□□□ -1.82
SMC4-203ENST00000462668 PCDHA2Q9Y5H9 948 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 CDY2AQ9Y6F7 541 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 DDX3XO00571 662 aaKnown RBP eCLIP3.66□□□□□ -1.82
SMC4-203ENST00000462668 NPC1O15118 1278 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 BAIAP3O94812 1187 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 CELA3BP08861 270 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 APBA1Q02410 837 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 ADRM1Q16186 407 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 OGFOD3Q6PK18 319 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 KLHDC4Q8TBB5 520 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 LINC01599Q8WXQ3 324 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 MYRFLQ96LU7 910 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 UBL7Q96S82 380 aaPredicted RBP3.66□□□□□ -1.82
SMC4-203ENST00000462668 SMYD2Q9NRG4 433 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 EPB41L2O43491 1005 aaKnown RBP3.66□□□□□ -1.82
SMC4-203ENST00000462668 HSPA7P48741 367 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 SEPHS1P49903 392 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 KIF11P52732 1056 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 OXCT1P55809 520 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 SPIRE1Q08AE8 756 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 DUSP4Q13115 394 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 C3orf36Q3SXR2 165 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 SFRP5Q5T4F7 317 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 ESPNLQ6ZVH7 1005 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 KCTD1Q719H9 257 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 MYCT1Q8N699 235 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 TOP6BLQ8N6T0 577 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 RTF1Q92541 710 aaKnown RBP3.66□□□□□ -1.82
SMC4-203ENST00000462668 MRGPRX4Q96LA9 322 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 QRSL1Q9H0R6 528 aaKnown RBP3.66□□□□□ -1.82
SMC4-203ENST00000462668 ARFGAP3Q9NP61 516 aa3.66□□□□□ -1.82
SMC4-203ENST00000462668 AGR2O95994 175 aa3.65□□□□□ -1.82
SMC4-203ENST00000462668 MAP2K6P52564 334 aa3.65□□□□□ -1.82
SMC4-203ENST00000462668 MYBPC2Q14324 1141 aa3.65□□□□□ -1.82
SMC4-203ENST00000462668 WDR45BQ5MNZ6 344 aa3.65□□□□□ -1.82
SMC4-203ENST00000462668 ANKRD23Q86SG2 305 aa3.65□□□□□ -1.82
SMC4-203ENST00000462668 FAM167AQ96KS9 214 aa3.65□□□□□ -1.82
SMC4-203ENST00000462668 SAMD11Q96NU1 681 aa3.65□□□□□ -1.82
SMC4-203ENST00000462668 COL25A1Q9BXS0 654 aaPredicted RBP3.65□□□□□ -1.82
SMC4-203ENST00000462668 MYLK2Q9H1R3 596 aa3.65□□□□□ -1.82
SMC4-203ENST00000462668 ADAM7Q9H2U9 754 aa3.65□□□□□ -1.82
SMC4-203ENST00000462668 UBN1Q9NPG3 1134 aa3.65□□□□□ -1.82
SMC4-203ENST00000462668 TBC1D22BQ9NU19 505 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms