RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 C11orf63Q6NUN7 778 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 EPM2AIP1Q7L775 607 aaPredicted RBP3.81□□□□□ -1.8
COL8A1-204ENST00000462604 TAOK1Q7L7X3 1001 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 HS2ST1Q7LGA3 356 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 DDX42Q86XP3 938 aaKnown RBP eCLIP3.81□□□□□ -1.8
COL8A1-204ENST00000462604 COL23A1Q86Y22 540 aaPredicted RBP3.81□□□□□ -1.8
COL8A1-204ENST00000462604 JAMLQ86YT9 394 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 CCDC24Q8N4L8 307 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 SYT2Q8N9I0 419 aaPredicted RBP3.81□□□□□ -1.8
COL8A1-204ENST00000462604 CCDC63Q8NA47 563 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 RBM46Q8TBY0 533 aaKnown RBP3.81□□□□□ -1.8
COL8A1-204ENST00000462604 ATP8B4Q8TF62 1192 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 ZKSCAN4Q969J2 545 aaPredicted RBP3.81□□□□□ -1.8
COL8A1-204ENST00000462604 SLC35C1Q96A29 364 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 PGM2Q96G03 612 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 RBM17Q96I25 401 aaKnown RBP3.81□□□□□ -1.8
COL8A1-204ENST00000462604 CCDC17Q96LX7 622 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 FAM20AQ96MK3 541 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 MBOAT7Q96N66 472 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 SCLT1Q96NL6 688 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 GPR101Q96P66 508 aaPredicted RBP3.81□□□□□ -1.8
COL8A1-204ENST00000462604 JPH2Q9BR39 696 aaPredicted RBP3.81□□□□□ -1.8
COL8A1-204ENST00000462604 PLCD4Q9BRC7 762 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 REEP2Q9BRK0 252 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 TRIM51Q9BSJ1 452 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 MKNK1Q9BUB5 465 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 POLR3CQ9BUI4 534 aaPredicted RBP3.81□□□□□ -1.8
COL8A1-204ENST00000462604 TXLNGYQ9BZA5 131 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 TRIM31Q9BZY9 425 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 CARD9Q9H257 536 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 NEUROG2Q9H2A3 272 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 GOLPH3Q9H4A6 298 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 AZI2Q9H6S1 392 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 EHMT1Q9H9B1 1298 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 KANSL2Q9H9L4 492 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 ATP6V0A4Q9HBG4 840 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 CD248Q9HCU0 757 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 CD209Q9NNX6 404 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 SIX2Q9NPC8 291 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 SEPT11Q9NVA2 429 aaKnown RBP3.81□□□□□ -1.8
COL8A1-204ENST00000462604 HAUS2Q9NVX0 235 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 KIAA1522Q9P206 1035 aaPredicted RBP3.81□□□□□ -1.8
COL8A1-204ENST00000462604 SEL1LQ9UBV2 794 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 AMACRQ9UHK6 382 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 SERPINB13Q9UIV8 391 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 MCM8Q9UJA3 840 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 SSUH2Q9Y2M2 353 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 SUGT1Q9Y2Z0 365 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 RABGAP1Q9Y3P9 1069 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 DAGLAQ9Y4D2 1042 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 PCDHA1Q9Y5I3 950 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 DLEC1Q9Y238 1755 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 DOT1LQ8TEK3 1739 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 SETD1BQ9UPS6 1966 aaKnown RBP3.8□□□□□ -1.8
COL8A1-204ENST00000462604 ASTN1O14525 1302 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 PASKQ96RG2 1323 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 LOC102724159A0A0B4J2E5 919 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 A0A1B0GUA9 196 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 RBM47A0AV96 593 aaKnown RBP3.8□□□□□ -1.8
COL8A1-204ENST00000462604 TLDC2A0PJX2 215 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 ANKRD62A6NC57 917 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 SMIM23A6NLE4 172 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 PHF20L1A8MW92 1017 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 USP17L15C9J2P7 530 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 USP17L13C9JLJ4 530 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 USP17L11C9JVI0 530 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 USP17L18D6R9N7 530 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 USP17L22D6RA61 530 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 USP17L17D6RBQ6 530 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 USP17L19D6RCP7 530 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 USP17L20D6RJB6 530 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 MEIS1O00470 390 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 PODXLO00592 558 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 KCNQ2O43526 872 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 C21orf2O43822 256 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 EDIL3O43854 480 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 EVI5O60447 810 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 CAND2O75155 1236 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 ATP2C2O75185 946 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 BBOX1O75936 387 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 VIMP08670 466 aaKnown RBP3.8□□□□□ -1.8
COL8A1-204ENST00000462604 ZBTB48P10074 688 aaPredicted RBP3.8□□□□□ -1.8
COL8A1-204ENST00000462604 BCRP11274 1271 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 CHN1P15882 459 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 ABCB4P21439 1286 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 GBP2P32456 591 aaPredicted RBP3.8□□□□□ -1.8
COL8A1-204ENST00000462604 ELF1P32519 619 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 SHMT1P34896 483 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 RFC4P35249 363 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 SLC16A2P36021 539 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 ZNF76P36508 570 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 FLT3P36888 993 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 SREBF1P36956 1147 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 MMP13P45452 471 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 FMO5P49326 533 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 DRG2P55039 364 aaKnown RBP3.8□□□□□ -1.8
COL8A1-204ENST00000462604 PLTPP55058 493 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 HADHBP55084 474 aaKnown RBP3.8□□□□□ -1.8
COL8A1-204ENST00000462604 KLRC3Q07444 240 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 USP17L24Q0WX57 530 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms