RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 DHX33Q9H6R0 707 aaKnown RBP20.68■□□□□ 0.9
CDKN1A-206ENST00000462537 A0A087WWV3 80 aa20.67■□□□□ 0.9
CDKN1A-206ENST00000462537 VPS37CA5D8V6 355 aaPredicted RBP20.67■□□□□ 0.9
CDKN1A-206ENST00000462537 EPOPA6NHQ4 379 aa20.67■□□□□ 0.9
CDKN1A-206ENST00000462537 MGEA5O60502 916 aa20.67■□□□□ 0.9
CDKN1A-206ENST00000462537 LYPLA2O95372 231 aa20.67■□□□□ 0.9
CDKN1A-206ENST00000462537 STAG3L1P0CL83 205 aa20.67■□□□□ 0.9
CDKN1A-206ENST00000462537 DARSP14868 501 aaKnown RBP20.67■□□□□ 0.9
CDKN1A-206ENST00000462537 ADGRE1Q14246 886 aa20.67■□□□□ 0.9
CDKN1A-206ENST00000462537 SP7Q8TDD2 431 aaPredicted RBP20.67■□□□□ 0.9
CDKN1A-206ENST00000462537 PIGOQ8TEQ8 1089 aa20.67■□□□□ 0.9
CDKN1A-206ENST00000462537 TMEM143Q96AN5 459 aa20.67■□□□□ 0.9
CDKN1A-206ENST00000462537 GCOM2Q9BZD3 368 aaPredicted RBP20.67■□□□□ 0.9
CDKN1A-206ENST00000462537 TUFT1Q9NNX1 390 aa20.67■□□□□ 0.9
CDKN1A-206ENST00000462537 ANKEF1Q9NU02 776 aa20.67■□□□□ 0.9
CDKN1A-206ENST00000462537 TTC3P53804 2025 aa20.66■□□□□ 0.9
CDKN1A-206ENST00000462537 A0A087WZ62 844 aa20.66■□□□□ 0.9
CDKN1A-206ENST00000462537 K7ELQ4 463 aaPredicted RBP20.66■□□□□ 0.9
CDKN1A-206ENST00000462537 GAS2O43903 313 aaKnown RBP20.66■□□□□ 0.9
CDKN1A-206ENST00000462537 MED24O75448 989 aa20.66■□□□□ 0.9
CDKN1A-206ENST00000462537 FGFR4P22455 802 aa20.66■□□□□ 0.9
CDKN1A-206ENST00000462537 SARSP49591 514 aaKnown RBP20.66■□□□□ 0.9
CDKN1A-206ENST00000462537 FXR2P51116 673 aaKnown RBP eCLIP20.66■□□□□ 0.9
CDKN1A-206ENST00000462537 FAM43BQ6ZT52 329 aaPredicted RBP20.66■□□□□ 0.9
CDKN1A-206ENST00000462537 ZNF410Q86VK4 478 aa20.66■□□□□ 0.9
CDKN1A-206ENST00000462537 CATSPER3Q86XQ3 398 aa20.66■□□□□ 0.9
CDKN1A-206ENST00000462537 NPAS4Q8IUM7 802 aa20.66■□□□□ 0.9
CDKN1A-206ENST00000462537 KSR1Q8IVT5 923 aa20.66■□□□□ 0.9
CDKN1A-206ENST00000462537 TCP11Q8WWU5 503 aa20.66■□□□□ 0.9
CDKN1A-206ENST00000462537 PSPC1Q8WXF1 523 aaKnown RBP20.66■□□□□ 0.9
CDKN1A-206ENST00000462537 PPM1EQ8WY54 764 aa20.66■□□□□ 0.9
CDKN1A-206ENST00000462537 MTRQ99707 1265 aa20.66■□□□□ 0.9
CDKN1A-206ENST00000462537 FDXACB1Q9BRP7 624 aaPredicted RBP20.66■□□□□ 0.9
CDKN1A-206ENST00000462537 RAB34Q9BZG1 259 aa20.66■□□□□ 0.9
CDKN1A-206ENST00000462537 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.66■□□□□ 0.9
CDKN1A-206ENST00000462537 RGS18Q9NS28 235 aa20.66■□□□□ 0.9
CDKN1A-206ENST00000462537 C1orf112Q9NSG2 853 aa20.66■□□□□ 0.9
CDKN1A-206ENST00000462537 FOXD4L1Q9NU39 408 aa20.66■□□□□ 0.9
CDKN1A-206ENST00000462537 LRWD1Q9UFC0 647 aa20.66■□□□□ 0.9
CDKN1A-206ENST00000462537 COL4A3BPQ9Y5P4 624 aa20.66■□□□□ 0.9
CDKN1A-206ENST00000462537 NLRC5Q86WI3 1866 aa20.66■□□□□ 0.9
CDKN1A-206ENST00000462537 COL6A3P12111 3177 aa20.65■□□□□ 0.9
CDKN1A-206ENST00000462537 COL4A6Q14031 1691 aa20.65■□□□□ 0.9
CDKN1A-206ENST00000462537 ADGRA3Q8IWK6 1321 aa20.65■□□□□ 0.9
CDKN1A-206ENST00000462537 LAD1O00515 517 aa20.65■□□□□ 0.9
CDKN1A-206ENST00000462537 CSDE1O75534 798 aaKnown RBP20.65■□□□□ 0.9
CDKN1A-206ENST00000462537 SPATA31C1P0DKV0 1188 aa20.65■□□□□ 0.9
CDKN1A-206ENST00000462537 ZSCAN20P17040 1043 aaPredicted RBP20.65■□□□□ 0.9
CDKN1A-206ENST00000462537 PDCP20941 246 aa20.65■□□□□ 0.9
CDKN1A-206ENST00000462537 ERVK-21P61565 698 aa20.65■□□□□ 0.9
CDKN1A-206ENST00000462537 HAUS3Q68CZ6 603 aa20.65■□□□□ 0.9
CDKN1A-206ENST00000462537 SLC24A5Q71RS6 500 aa20.65■□□□□ 0.9
CDKN1A-206ENST00000462537 MICALL1Q8N3F8 863 aa20.65■□□□□ 0.9
CDKN1A-206ENST00000462537 FIBCD1Q8N539 461 aa20.65■□□□□ 0.9
CDKN1A-206ENST00000462537 C17orf80Q9BSJ5 609 aa20.65■□□□□ 0.9
CDKN1A-206ENST00000462537 POLR3CQ9BUI4 534 aaPredicted RBP20.65■□□□□ 0.9
CDKN1A-206ENST00000462537 ATP6V0A4Q9HBG4 840 aa20.65■□□□□ 0.9
CDKN1A-206ENST00000462537 RNF216Q9NWF9 866 aaPredicted RBP20.65■□□□□ 0.9
CDKN1A-206ENST00000462537 PCDHB7Q9Y5E2 793 aa20.65■□□□□ 0.9
CDKN1A-206ENST00000462537 MYO9BQ13459 2157 aa20.64■□□□□ 0.89
CDKN1A-206ENST00000462537 GTPBP6O43824 516 aaPredicted RBP20.64■□□□□ 0.89
CDKN1A-206ENST00000462537 DGKIO75912 1065 aa20.64■□□□□ 0.89
CDKN1A-206ENST00000462537 SRGAP2CP0DJJ0 459 aa20.64■□□□□ 0.89
CDKN1A-206ENST00000462537 SFPQP23246 707 aaKnown RBP eCLIP20.64■□□□□ 0.896e-6■■■■□ 22
CDKN1A-206ENST00000462537 CCT6AP40227 531 aaKnown RBP20.64■□□□□ 0.89
CDKN1A-206ENST00000462537 BTG3Q14201 252 aaPredicted RBP20.64■□□□□ 0.89
CDKN1A-206ENST00000462537 POTEGQ6S5H5 508 aa20.64■□□□□ 0.89
CDKN1A-206ENST00000462537 FBXO22Q8NEZ5 403 aa20.64■□□□□ 0.89
CDKN1A-206ENST00000462537 GDPD5Q8WTR4 605 aa20.64■□□□□ 0.89
CDKN1A-206ENST00000462537 PRPF31Q8WWY3 499 aaKnown RBP20.64■□□□□ 0.89
CDKN1A-206ENST00000462537 NACC1Q96RE7 527 aa20.64■□□□□ 0.89
CDKN1A-206ENST00000462537 INO80BQ9C086 356 aaPredicted RBP20.64■□□□□ 0.89
CDKN1A-206ENST00000462537 CHD7Q9P2D1 2997 aa20.64■□□□□ 0.89
CDKN1A-206ENST00000462537 RALGAPA2Q2PPJ7 1873 aa20.63■□□□□ 0.89
CDKN1A-206ENST00000462537 USO1O60763 962 aaKnown RBP20.63■□□□□ 0.89
CDKN1A-206ENST00000462537 DGAT1O75907 488 aa20.63■□□□□ 0.89
CDKN1A-206ENST00000462537 RPA1P27694 616 aa20.63■□□□□ 0.89
CDKN1A-206ENST00000462537 PRPHP41219 470 aa20.63■□□□□ 0.89
CDKN1A-206ENST00000462537 RARRES1P49788 294 aa20.63■□□□□ 0.89
CDKN1A-206ENST00000462537 LAMTOR4Q0VGL1 99 aa20.63■□□□□ 0.89
CDKN1A-206ENST00000462537 CCDC85BQ15834 202 aaPredicted RBP20.63■□□□□ 0.89
CDKN1A-206ENST00000462537 PAN2Q504Q3 1202 aaKnown RBP20.63■□□□□ 0.89
CDKN1A-206ENST00000462537 DTHD1Q6ZMT9 781 aa20.63■□□□□ 0.89
CDKN1A-206ENST00000462537 BRAPQ7Z569 592 aa20.63■□□□□ 0.89
CDKN1A-206ENST00000462537 FERMT3Q86UX7 667 aa20.63■□□□□ 0.89
CDKN1A-206ENST00000462537 INTS4Q96HW7 963 aaKnown RBP20.63■□□□□ 0.89
CDKN1A-206ENST00000462537 SAMD11Q96NU1 681 aa20.63■□□□□ 0.89
CDKN1A-206ENST00000462537 XRCC6P12956 609 aaKnown RBP eCLIP20.62■□□□□ 0.89
CDKN1A-206ENST00000462537 GRB10Q13322 594 aa20.62■□□□□ 0.89
CDKN1A-206ENST00000462537 PDIA5Q14554 519 aa20.62■□□□□ 0.89
CDKN1A-206ENST00000462537 DSC3Q14574 896 aa20.62■□□□□ 0.89
CDKN1A-206ENST00000462537 CATSPER4Q7RTX7 472 aa20.62■□□□□ 0.89
CDKN1A-206ENST00000462537 HSCBQ8IWL3 235 aa20.62■□□□□ 0.89
CDKN1A-206ENST00000462537 TMEM192Q8IY95 271 aa20.62■□□□□ 0.89
CDKN1A-206ENST00000462537 IGSF22Q8N9C0 903 aa20.62■□□□□ 0.89
CDKN1A-206ENST00000462537 SLC17A8Q8NDX2 589 aa20.62■□□□□ 0.89
CDKN1A-206ENST00000462537 SNX29Q8TEQ0 813 aa20.62■□□□□ 0.89
CDKN1A-206ENST00000462537 ZNF689Q96CS4 500 aaPredicted RBP20.62■□□□□ 0.89
CDKN1A-206ENST00000462537 RC3H2Q9HBD1 1191 aaKnown RBP20.62■□□□□ 0.89
CDKN1A-206ENST00000462537 XPNPEP1Q9NQW7 623 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms