RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 VIL1P09327 827 aaKnown RBP18.43■□□□□ 0.54
ACTB-207ENST00000462494 MIGA2Q7L4E1 593 aa18.43■□□□□ 0.54
ACTB-207ENST00000462494 ACTRT1Q8TDG2 376 aa18.43■□□□□ 0.54
ACTB-207ENST00000462494 STK33Q9BYT3 514 aa18.43■□□□□ 0.54
ACTB-207ENST00000462494 RANBP17Q9H2T7 1088 aaKnown RBP18.43■□□□□ 0.54
ACTB-207ENST00000462494 SEPT11Q9NVA2 429 aaKnown RBP18.43■□□□□ 0.54
ACTB-207ENST00000462494 FBXO28Q9NVF7 368 aa18.43■□□□□ 0.54
ACTB-207ENST00000462494 NENFQ9UMX5 172 aa18.43■□□□□ 0.54
ACTB-207ENST00000462494 ARHGEF35A5YM69 484 aa18.43■□□□□ 0.54
ACTB-207ENST00000462494 ZNF233A6NK53 670 aa18.43■□□□□ 0.54
ACTB-207ENST00000462494 KRIT1O00522 736 aa18.43■□□□□ 0.54
ACTB-207ENST00000462494 PLSCR1O15162 318 aa18.43■□□□□ 0.54
ACTB-207ENST00000462494 ABCB4P21439 1286 aa18.43■□□□□ 0.54
ACTB-207ENST00000462494 ARHGAP44Q17R89 818 aa18.43■□□□□ 0.54
ACTB-207ENST00000462494 IQCKQ8N0W5 287 aa18.43■□□□□ 0.54
ACTB-207ENST00000462494 WHAMMQ8TF30 809 aa18.43■□□□□ 0.54
ACTB-207ENST00000462494 SCFD2Q8WU76 684 aa18.43■□□□□ 0.54
ACTB-207ENST00000462494 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.43■□□□□ 0.542e-24■■□□□ 12.9
ACTB-207ENST00000462494 TEKT3Q9BXF9 490 aa18.43■□□□□ 0.54
ACTB-207ENST00000462494 WDR11Q9BZH6 1224 aa18.43■□□□□ 0.54
ACTB-207ENST00000462494 DDX47Q9H0S4 455 aaKnown RBP18.43■□□□□ 0.54
ACTB-207ENST00000462494 TAF1DQ9H5J8 278 aaPredicted RBP18.43■□□□□ 0.54
ACTB-207ENST00000462494 VEZTQ9HBM0 779 aa18.43■□□□□ 0.54
ACTB-207ENST00000462494 OSGEPQ9NPF4 335 aa18.43■□□□□ 0.54
ACTB-207ENST00000462494 SEL1LQ9UBV2 794 aa18.43■□□□□ 0.54
ACTB-207ENST00000462494 SYNPO2Q9UMS6 1093 aa18.43■□□□□ 0.54
ACTB-207ENST00000462494 ZNF646O15015 1829 aaPredicted RBP18.42■□□□□ 0.54
ACTB-207ENST00000462494 SPDYE2BA6NHP3 402 aa18.42■□□□□ 0.54
ACTB-207ENST00000462494 TULP1O00294 542 aaPredicted RBP18.42■□□□□ 0.54
ACTB-207ENST00000462494 IPO5O00410 1097 aaKnown RBP18.42■□□□□ 0.54
ACTB-207ENST00000462494 EXOC3O60645 756 aa18.42■□□□□ 0.54
ACTB-207ENST00000462494 SPDYE6P0CI01 402 aa18.42■□□□□ 0.54
ACTB-207ENST00000462494 ERVK-9P63128 1117 aa18.42■□□□□ 0.54
ACTB-207ENST00000462494 SYCE1Q8N0S2 351 aa18.42■□□□□ 0.54
ACTB-207ENST00000462494 MKNK1Q9BUB5 465 aa18.42■□□□□ 0.54
ACTB-207ENST00000462494 INTS2Q9H0H0 1204 aaKnown RBP18.42■□□□□ 0.54
ACTB-207ENST00000462494 A0A0A6YYK5 440 aaPredicted RBP18.42■□□□□ 0.54
ACTB-207ENST00000462494 SART1O43290 800 aaKnown RBP18.42■□□□□ 0.54
ACTB-207ENST00000462494 C21orf2O43822 256 aa18.42■□□□□ 0.54
ACTB-207ENST00000462494 HIP1RO75146 1068 aa18.42■□□□□ 0.54
ACTB-207ENST00000462494 RAD17O75943 681 aa18.42■□□□□ 0.54
ACTB-207ENST00000462494 ATP1A2P50993 1020 aa18.42■□□□□ 0.54
ACTB-207ENST00000462494 ZNF131P52739 623 aa18.42■□□□□ 0.54
ACTB-207ENST00000462494 NFIL3Q16649 462 aa18.42■□□□□ 0.54
ACTB-207ENST00000462494 LDHDQ86WU2 507 aa18.42■□□□□ 0.54
ACTB-207ENST00000462494 DDX42Q86XP3 938 aaKnown RBP eCLIP18.42■□□□□ 0.542e-24■□□□□ 9.3
ACTB-207ENST00000462494 PIK3R5Q8WYR1 880 aa18.42■□□□□ 0.54
ACTB-207ENST00000462494 HOOK2Q96ED9 719 aa18.42■□□□□ 0.54
ACTB-207ENST00000462494 ZNF70Q9UC06 446 aaPredicted RBP18.42■□□□□ 0.54
ACTB-207ENST00000462494 ODF2LQ9ULJ1 636 aa18.42■□□□□ 0.54
ACTB-207ENST00000462494 BCS1LQ9Y276 419 aa18.42■□□□□ 0.54
ACTB-207ENST00000462494 LMNB1P20700 586 aa18.41■□□□□ 0.54
ACTB-207ENST00000462494 MYL7Q01449 175 aa18.41■□□□□ 0.54
ACTB-207ENST00000462494 DLGAP5Q15398 846 aa18.41■□□□□ 0.54
ACTB-207ENST00000462494 MAATS1Q7Z4T9 603 aa18.41■□□□□ 0.54
ACTB-207ENST00000462494 SLFN11Q7Z7L1 901 aa18.41■□□□□ 0.54
ACTB-207ENST00000462494 NT5DC3Q86UY8 548 aa18.41■□□□□ 0.54
ACTB-207ENST00000462494 CDAN1Q8IWY9 1227 aa18.41■□□□□ 0.54
ACTB-207ENST00000462494 SLC35G2Q8TBE7 412 aa18.41■□□□□ 0.54
ACTB-207ENST00000462494 C7orf43Q8WVR3 580 aa18.41■□□□□ 0.54
ACTB-207ENST00000462494 ISCUQ9H1K1 167 aa18.41■□□□□ 0.54
ACTB-207ENST00000462494 VCPKMTQ9H867 229 aa18.41■□□□□ 0.54
ACTB-207ENST00000462494 SUCLA2Q9P2R7 463 aaPredicted RBP18.41■□□□□ 0.54
ACTB-207ENST00000462494 INTUQ9ULD6 942 aa18.41■□□□□ 0.54
ACTB-207ENST00000462494 UBE4BO95155 1302 aa18.41■□□□□ 0.54
ACTB-207ENST00000462494 LRRN2O75325 713 aa18.41■□□□□ 0.54
ACTB-207ENST00000462494 ITGA4P13612 1032 aa18.41■□□□□ 0.54
ACTB-207ENST00000462494 SETQ01105 290 aaPredicted RBP18.41■□□□□ 0.54
ACTB-207ENST00000462494 MREGQ8N565 214 aa18.41■□□□□ 0.54
ACTB-207ENST00000462494 SLC30A5Q8TAD4 765 aa18.41■□□□□ 0.54
ACTB-207ENST00000462494 BCAS4Q8TDM0 211 aa18.41■□□□□ 0.54
ACTB-207ENST00000462494 FAM151AQ8WW52 585 aa18.41■□□□□ 0.54
ACTB-207ENST00000462494 GLIS2Q9BZE0 524 aaPredicted RBP18.41■□□□□ 0.54
ACTB-207ENST00000462494 TSPYL1Q9H0U9 437 aa18.41■□□□□ 0.54
ACTB-207ENST00000462494 RASSF4Q9H2L5 321 aa18.41■□□□□ 0.54
ACTB-207ENST00000462494 PCIF1Q9H4Z3 704 aa18.41■□□□□ 0.54
ACTB-207ENST00000462494 APEX2Q9UBZ4 518 aa18.41■□□□□ 0.54
ACTB-207ENST00000462494 AMFRQ9UKV5 643 aa18.41■□□□□ 0.54
ACTB-207ENST00000462494 STXBP5LQ9Y2K9 1186 aa18.41■□□□□ 0.54
ACTB-207ENST00000462494 K7ENM7 598 aa18.4■□□□□ 0.54
ACTB-207ENST00000462494 CCT5P48643 541 aa18.4■□□□□ 0.54
ACTB-207ENST00000462494 CTNNBL1Q8WYA6 563 aaPredicted RBP18.4■□□□□ 0.54
ACTB-207ENST00000462494 GPR88Q9GZN0 384 aa18.4■□□□□ 0.54
ACTB-207ENST00000462494 DMAC2Q9NW81 257 aa18.4■□□□□ 0.54
ACTB-207ENST00000462494 KCND2Q9NZV8 630 aa18.4■□□□□ 0.54
ACTB-207ENST00000462494 AMACRQ9UHK6 382 aa18.4■□□□□ 0.54
ACTB-207ENST00000462494 COL2A1P02458 1487 aaPredicted RBP18.4■□□□□ 0.54
ACTB-207ENST00000462494 EIF3HO15372 352 aaKnown RBP eCLIP18.39■□□□□ 0.54
ACTB-207ENST00000462494 BUB1BO60566 1050 aaPredicted RBP18.39■□□□□ 0.54
ACTB-207ENST00000462494 ZBTB48P10074 688 aaPredicted RBP18.39■□□□□ 0.54
ACTB-207ENST00000462494 BFSP1Q12934 665 aa18.39■□□□□ 0.54
ACTB-207ENST00000462494 PDCLQ13371 301 aa18.39■□□□□ 0.54
ACTB-207ENST00000462494 CALR3Q96L12 384 aaKnown RBP18.39■□□□□ 0.54
ACTB-207ENST00000462494 AGBL1Q96MI9 1066 aa18.39■□□□□ 0.54
ACTB-207ENST00000462494 TMEM39BQ9GZU3 492 aa18.39■□□□□ 0.54
ACTB-207ENST00000462494 PLAAQ9Y263 795 aa18.39■□□□□ 0.54
ACTB-207ENST00000462494 ZBTB12Q9Y330 459 aaPredicted RBP18.39■□□□□ 0.54
ACTB-207ENST00000462494 GRIN2DO15399 1336 aa18.39■□□□□ 0.53
ACTB-207ENST00000462494 IGSF9BQ9UPX0 1349 aa18.39■□□□□ 0.53
ACTB-207ENST00000462494 TNFAIP3P21580 790 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms