RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 DHX8Q14562 1220 aaKnown RBP13.1□□□□□ -0.31
CPNE1-221ENST00000462352 MBTPS1Q14703 1052 aa13.1□□□□□ -0.31
CPNE1-221ENST00000462352 E2F4Q16254 413 aa13.1□□□□□ -0.31
CPNE1-221ENST00000462352 CSPP1Q1MSJ5 1256 aa13.1□□□□□ -0.31
CPNE1-221ENST00000462352 KIZQ2M2Z5 673 aa13.1□□□□□ -0.31
CPNE1-221ENST00000462352 C1orf186Q6ZWK4 172 aa13.1□□□□□ -0.31
CPNE1-221ENST00000462352 RHPN2Q8IUC4 686 aa13.1□□□□□ -0.31
CPNE1-221ENST00000462352 PRPF31Q8WWY3 499 aaKnown RBP13.1□□□□□ -0.31
CPNE1-221ENST00000462352 PSPC1Q8WXF1 523 aaKnown RBP13.1□□□□□ -0.31
CPNE1-221ENST00000462352 DHX58Q96C10 678 aa13.1□□□□□ -0.31
CPNE1-221ENST00000462352 CELF4Q9BZC1 486 aaKnown RBP13.1□□□□□ -0.31
CPNE1-221ENST00000462352 GPRC5CQ9NQ84 441 aa13.1□□□□□ -0.31
CPNE1-221ENST00000462352 KCNH3Q9ULD8 1083 aa13.1□□□□□ -0.31
CPNE1-221ENST00000462352 HPSEQ9Y251 543 aa13.1□□□□□ -0.31
CPNE1-221ENST00000462352 TRPV2Q9Y5S1 764 aa13.1□□□□□ -0.31
CPNE1-221ENST00000462352 TANC1Q9C0D5 1861 aa13.1□□□□□ -0.31
CPNE1-221ENST00000462352 FAM237AA0A1B0GTK4 181 aa13.09□□□□□ -0.31
CPNE1-221ENST00000462352 GOLGA6L4A6NEF3 574 aa13.09□□□□□ -0.31
CPNE1-221ENST00000462352 RBAK-RBAKDNI3L0D1 243 aa13.09□□□□□ -0.31
CPNE1-221ENST00000462352 POLR2DO15514 142 aaKnown RBP13.09□□□□□ -0.31
CPNE1-221ENST00000462352 CSF2RAP15509 400 aa13.09□□□□□ -0.31
CPNE1-221ENST00000462352 GUCY2CP25092 1073 aa13.09□□□□□ -0.31
CPNE1-221ENST00000462352 ARL2P36404 184 aa13.09□□□□□ -0.31
CPNE1-221ENST00000462352 MAGEA10P43363 369 aaPredicted RBP13.09□□□□□ -0.31
CPNE1-221ENST00000462352 GPC3P51654 580 aa13.09□□□□□ -0.31
CPNE1-221ENST00000462352 NLRP11P59045 1033 aaKnown RBP13.09□□□□□ -0.31
CPNE1-221ENST00000462352 MDM2Q00987 491 aaPredicted RBP13.09□□□□□ -0.31
CPNE1-221ENST00000462352 FPGSQ05932 587 aa13.09□□□□□ -0.31
CPNE1-221ENST00000462352 GPNMBQ14956 572 aa13.09□□□□□ -0.31
CPNE1-221ENST00000462352 FAM102BQ5T8I3 360 aa13.09□□□□□ -0.31
CPNE1-221ENST00000462352 CLEC17AQ6ZS10 378 aa13.09□□□□□ -0.31
CPNE1-221ENST00000462352 GPBP1Q86WP2 473 aa13.09□□□□□ -0.31
CPNE1-221ENST00000462352 FSIP1Q8NA03 581 aa13.09□□□□□ -0.31
CPNE1-221ENST00000462352 IQUBQ8NA54 791 aa13.09□□□□□ -0.31
CPNE1-221ENST00000462352 TMEM87AQ8NBN3 555 aa13.09□□□□□ -0.31
CPNE1-221ENST00000462352 ASAP3Q8TDY4 903 aa13.09□□□□□ -0.31
CPNE1-221ENST00000462352 MRPS27Q92552 414 aaKnown RBP13.09□□□□□ -0.31
CPNE1-221ENST00000462352 ZNF668Q96K58 619 aaPredicted RBP13.09□□□□□ -0.31
CPNE1-221ENST00000462352 LBHD1Q9BQE6 289 aaPredicted RBP13.09□□□□□ -0.31
CPNE1-221ENST00000462352 POLR3FQ9H1D9 316 aaPredicted RBP13.09□□□□□ -0.31
CPNE1-221ENST00000462352 ADAMTS10Q9H324 1103 aa13.09□□□□□ -0.31
CPNE1-221ENST00000462352 GOLPH3LQ9H4A5 285 aa13.09□□□□□ -0.31
CPNE1-221ENST00000462352 CDHR5Q9HBB8 845 aa13.09□□□□□ -0.31
CPNE1-221ENST00000462352 POLD4Q9HCU8 107 aa13.09□□□□□ -0.31
CPNE1-221ENST00000462352 KCND2Q9NZV8 630 aa13.09□□□□□ -0.31
CPNE1-221ENST00000462352 GINS2Q9Y248 185 aa13.09□□□□□ -0.31
CPNE1-221ENST00000462352 COL4A3BPQ9Y5P4 624 aa13.09□□□□□ -0.31
CPNE1-221ENST00000462352 A0A087WZ62 844 aa13.08□□□□□ -0.32
CPNE1-221ENST00000462352 ASAP2O43150 1006 aa13.08□□□□□ -0.32
CPNE1-221ENST00000462352 NBNO60934 754 aa13.08□□□□□ -0.32
CPNE1-221ENST00000462352 HIP1RO75146 1068 aa13.08□□□□□ -0.32
CPNE1-221ENST00000462352 PARNO95453 639 aaKnown RBP13.08□□□□□ -0.32
CPNE1-221ENST00000462352 RFC2P35250 354 aa13.08□□□□□ -0.32
CPNE1-221ENST00000462352 NDUFA8P51970 172 aa13.08□□□□□ -0.32
CPNE1-221ENST00000462352 CDC42EP1Q00587 391 aa13.08□□□□□ -0.32
CPNE1-221ENST00000462352 RAD51AP2Q09MP3 1159 aa13.08□□□□□ -0.32
CPNE1-221ENST00000462352 LAMTOR4Q0VGL1 99 aa13.08□□□□□ -0.32
CPNE1-221ENST00000462352 MXD4Q14582 209 aaPredicted RBP13.08□□□□□ -0.32
CPNE1-221ENST00000462352 ARSHQ5FYA8 562 aa13.08□□□□□ -0.32
CPNE1-221ENST00000462352 FBXO47Q5MNV8 452 aa13.08□□□□□ -0.32
CPNE1-221ENST00000462352 SV2BQ7L1I2 683 aa13.08□□□□□ -0.32
CPNE1-221ENST00000462352 DEFB128Q7Z7B8 93 aa13.08□□□□□ -0.32
CPNE1-221ENST00000462352 KSR1Q8IVT5 923 aa13.08□□□□□ -0.32
CPNE1-221ENST00000462352 ZNF710Q8N1W2 664 aa13.08□□□□□ -0.32
CPNE1-221ENST00000462352 NLRP7Q8WX94 980 aa13.08□□□□□ -0.32
CPNE1-221ENST00000462352 VWCEQ96DN2 955 aa13.08□□□□□ -0.32
CPNE1-221ENST00000462352 NLRP4Q96MN2 994 aa13.08□□□□□ -0.32
CPNE1-221ENST00000462352 SCLT1Q96NL6 688 aa13.08□□□□□ -0.32
CPNE1-221ENST00000462352 OSMRQ99650 979 aa13.08□□□□□ -0.32
CPNE1-221ENST00000462352 FDXACB1Q9BRP7 624 aaPredicted RBP13.08□□□□□ -0.32
CPNE1-221ENST00000462352 PYM1Q9BRP8 204 aaKnown RBP13.08□□□□□ -0.32
CPNE1-221ENST00000462352 TIPINQ9BVW5 301 aa13.08□□□□□ -0.32
CPNE1-221ENST00000462352 OSBPL7Q9BZF2 842 aa13.08□□□□□ -0.32
CPNE1-221ENST00000462352 CUEDC2Q9H467 287 aa13.08□□□□□ -0.32
CPNE1-221ENST00000462352 SIP14410 1827 aa13.07□□□□□ -0.32
CPNE1-221ENST00000462352 NPHP3-ACAD11A0A0J9YXS1 232 aa13.07□□□□□ -0.32
CPNE1-221ENST00000462352 GADD45BO75293 160 aaPredicted RBP13.07□□□□□ -0.32
CPNE1-221ENST00000462352 CXCL10P02778 98 aa13.07□□□□□ -0.32
CPNE1-221ENST00000462352 GHRP10912 638 aa13.07□□□□□ -0.32
CPNE1-221ENST00000462352 GLRA2P23416 452 aa13.07□□□□□ -0.32
CPNE1-221ENST00000462352 SYKP43405 635 aa13.07□□□□□ -0.32
CPNE1-221ENST00000462352 CRYBB1P53674 252 aaPredicted RBP13.07□□□□□ -0.32
CPNE1-221ENST00000462352 CACNB1Q02641 598 aaPredicted RBP13.07□□□□□ -0.32
CPNE1-221ENST00000462352 MAPK7Q13164 816 aa13.07□□□□□ -0.32
CPNE1-221ENST00000462352 PPIGQ13427 754 aaKnown RBP eCLIP13.07□□□□□ -0.322e-13■■□□□ 11.7
CPNE1-221ENST00000462352 CAPSQ13938 189 aa13.07□□□□□ -0.32
CPNE1-221ENST00000462352 LPIN1Q14693 890 aa13.07□□□□□ -0.32
CPNE1-221ENST00000462352 ZNF410Q86VK4 478 aa13.07□□□□□ -0.32
CPNE1-221ENST00000462352 DAW1Q8N136 415 aa13.07□□□□□ -0.32
CPNE1-221ENST00000462352 TMEM40Q8WWA1 233 aa13.07□□□□□ -0.32
CPNE1-221ENST00000462352 KIFAP3Q92845 792 aa13.07□□□□□ -0.32
CPNE1-221ENST00000462352 REEP2Q9BRK0 252 aa13.07□□□□□ -0.32
CPNE1-221ENST00000462352 TNMDQ9H2S6 317 aa13.07□□□□□ -0.32
CPNE1-221ENST00000462352 IL23AQ9NPF7 189 aa13.07□□□□□ -0.32
CPNE1-221ENST00000462352 SERTAD1Q9UHV2 236 aa13.07□□□□□ -0.32
CPNE1-221ENST00000462352 SQORQ9Y6N5 450 aa13.07□□□□□ -0.32
CPNE1-221ENST00000462352 SCN5AQ14524 2016 aa13.06□□□□□ -0.32
CPNE1-221ENST00000462352 MYMKA6NI61 221 aa13.06□□□□□ -0.32
CPNE1-221ENST00000462352 PRPF40AO75400 957 aaKnown RBP13.06□□□□□ -0.32
CPNE1-221ENST00000462352 KRT18P05783 430 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms