RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 SMIM10L2BP0DMW5 78 aa11.81□□□□□ -0.52
RTF1-202ENST00000462276 KLRC1P26715 233 aa11.81□□□□□ -0.52
RTF1-202ENST00000462276 HOXC8P31273 242 aa11.81□□□□□ -0.52
RTF1-202ENST00000462276 ARL2P36404 184 aa11.81□□□□□ -0.52
RTF1-202ENST00000462276 TYRO3Q06418 890 aa11.81□□□□□ -0.52
RTF1-202ENST00000462276 DMP1Q13316 513 aaPredicted RBP11.81□□□□□ -0.52
RTF1-202ENST00000462276 FAM26FQ5R3K3 315 aa11.81□□□□□ -0.52
RTF1-202ENST00000462276 FAM102BQ5T8I3 360 aa11.81□□□□□ -0.52
RTF1-202ENST00000462276 LRSAM1Q6UWE0 723 aa11.81□□□□□ -0.52
RTF1-202ENST00000462276 TRMT1LQ7Z2T5 733 aaKnown RBP11.81□□□□□ -0.52
RTF1-202ENST00000462276 NME8Q8N427 588 aa11.81□□□□□ -0.52
RTF1-202ENST00000462276 MYCT1Q8N699 235 aa11.81□□□□□ -0.52
RTF1-202ENST00000462276 PSPC1Q8WXF1 523 aaKnown RBP11.81□□□□□ -0.52
RTF1-202ENST00000462276 GZF1Q9H116 711 aaPredicted RBP11.81□□□□□ -0.52
RTF1-202ENST00000462276 ST6GALNAC4Q9H4F1 302 aa11.81□□□□□ -0.52
RTF1-202ENST00000462276 PCDHB13Q9Y5F0 798 aa11.81□□□□□ -0.52
RTF1-202ENST00000462276 PCDHA2Q9Y5H9 948 aa11.81□□□□□ -0.52
RTF1-202ENST00000462276 MCM3APO60318 1980 aa11.81□□□□□ -0.52
RTF1-202ENST00000462276 SMIM35A0A1B0GVV1 85 aa11.8□□□□□ -0.52
RTF1-202ENST00000462276 TMEM150BA6NC51 233 aa11.8□□□□□ -0.52
RTF1-202ENST00000462276 ERCC5P28715 1186 aaPredicted RBP11.8□□□□□ -0.52
RTF1-202ENST00000462276 NAMPTP43490 491 aa11.8□□□□□ -0.52
RTF1-202ENST00000462276 GJA8P48165 433 aa11.8□□□□□ -0.52
RTF1-202ENST00000462276 ADAM17P78536 824 aa11.8□□□□□ -0.52
RTF1-202ENST00000462276 COASYQ13057 564 aa11.8□□□□□ -0.52
RTF1-202ENST00000462276 MAPK7Q13164 816 aa11.8□□□□□ -0.52
RTF1-202ENST00000462276 TFDP1Q14186 410 aa11.8□□□□□ -0.52
RTF1-202ENST00000462276 MTFR1Q15390 333 aa11.8□□□□□ -0.52
RTF1-202ENST00000462276 NBPF20Q3BBV1 942 aa11.8□□□□□ -0.52
RTF1-202ENST00000462276 ODR4Q5SWX8 454 aa11.8□□□□□ -0.52
RTF1-202ENST00000462276 EFCAB12Q6NXP0 572 aa11.8□□□□□ -0.52
RTF1-202ENST00000462276 FOXR2Q6PJQ5 311 aa11.8□□□□□ -0.52
RTF1-202ENST00000462276 MTHFD1LQ6UB35 978 aa11.8□□□□□ -0.52
RTF1-202ENST00000462276 FAM43BQ6ZT52 329 aaPredicted RBP11.8□□□□□ -0.52
RTF1-202ENST00000462276 FAM178BQ8IXR5 827 aa11.8□□□□□ -0.52
RTF1-202ENST00000462276 LMBR1Q8WVP7 490 aa11.8□□□□□ -0.52
RTF1-202ENST00000462276 VTI1AQ96AJ9 217 aa11.8□□□□□ -0.52
RTF1-202ENST00000462276 MAP7D2Q96T17 732 aa11.8□□□□□ -0.52
RTF1-202ENST00000462276 FUCA2Q9BTY2 467 aa11.8□□□□□ -0.52
RTF1-202ENST00000462276 TMEM106CQ9BVX2 250 aa11.8□□□□□ -0.52
RTF1-202ENST00000462276 ZHX3Q9H4I2 956 aa11.8□□□□□ -0.52
RTF1-202ENST00000462276 XPNPEP1Q9NQW7 623 aa11.8□□□□□ -0.52
RTF1-202ENST00000462276 GTF2IRD1Q9UHL9 959 aa11.8□□□□□ -0.52
RTF1-202ENST00000462276 HTTP42858 3142 aa11.8□□□□□ -0.52
RTF1-202ENST00000462276 NPHP3-ACAD11A0A0J9YXS1 232 aa11.79□□□□□ -0.52
RTF1-202ENST00000462276 A0A0U1RQG5 324 aaPredicted RBP11.79□□□□□ -0.52
RTF1-202ENST00000462276 PSMA7O14818 248 aa11.79□□□□□ -0.52
RTF1-202ENST00000462276 EIF3DO15371 548 aaKnown RBP eCLIP11.79□□□□□ -0.52
RTF1-202ENST00000462276 TFRCP02786 760 aaKnown RBP11.79□□□□□ -0.52
RTF1-202ENST00000462276 MYCNP04198 464 aaPredicted RBP11.79□□□□□ -0.52
RTF1-202ENST00000462276 CASP1P29466 404 aa11.79□□□□□ -0.52
RTF1-202ENST00000462276 RGS19P49795 217 aa11.79□□□□□ -0.52
RTF1-202ENST00000462276 EFNA5P52803 228 aa11.79□□□□□ -0.52
RTF1-202ENST00000462276 SNRPFP62306 86 aaKnown RBP11.79□□□□□ -0.52
RTF1-202ENST00000462276 ITGA7Q13683 1181 aa11.79□□□□□ -0.52
RTF1-202ENST00000462276 MARCH8Q5T0T0 291 aa11.79□□□□□ -0.52
RTF1-202ENST00000462276 ZNF720Q7Z2F6 126 aa11.79□□□□□ -0.52
RTF1-202ENST00000462276 RPAINQ86UA6 219 aa11.79□□□□□ -0.52
RTF1-202ENST00000462276 RSPH3Q86UC2 560 aa11.79□□□□□ -0.52
RTF1-202ENST00000462276 DAW1Q8N136 415 aa11.79□□□□□ -0.52
RTF1-202ENST00000462276 GUF1Q8N442 669 aaKnown RBP11.79□□□□□ -0.52
RTF1-202ENST00000462276 METTL13Q8N6R0 699 aa11.79□□□□□ -0.52
RTF1-202ENST00000462276 LINC01465Q8N7H1 131 aa11.79□□□□□ -0.52
RTF1-202ENST00000462276 SLC43A3Q8NBI5 491 aa11.79□□□□□ -0.52
RTF1-202ENST00000462276 U2AF1L4Q8WU68 220 aaKnown RBP11.79□□□□□ -0.52
RTF1-202ENST00000462276 HVCN1Q96D96 273 aa11.79□□□□□ -0.52
RTF1-202ENST00000462276 DHTKD1Q96HY7 919 aaPredicted RBP11.79□□□□□ -0.52
RTF1-202ENST00000462276 NFKBIZQ9BYH8 718 aa11.79□□□□□ -0.52
RTF1-202ENST00000462276 C2orf40Q9H1Z8 148 aa11.79□□□□□ -0.52
RTF1-202ENST00000462276 TSPY26PQ9H489 355 aa11.79□□□□□ -0.52
RTF1-202ENST00000462276 MRPL44Q9H9J2 332 aaKnown RBP11.79□□□□□ -0.52
RTF1-202ENST00000462276 SUGCTQ9HAC7 445 aa11.79□□□□□ -0.52
RTF1-202ENST00000462276 STARD7Q9NQZ5 370 aa11.79□□□□□ -0.52
RTF1-202ENST00000462276 SETD4Q9NVD3 440 aa11.79□□□□□ -0.52
RTF1-202ENST00000462276 SUCLA2Q9P2R7 463 aaPredicted RBP11.79□□□□□ -0.52
RTF1-202ENST00000462276 HDAC6Q9UBN7 1215 aa11.79□□□□□ -0.52
RTF1-202ENST00000462276 UBE4BO95155 1302 aa11.79□□□□□ -0.52
RTF1-202ENST00000462276 BIN1O00499 593 aa11.78□□□□□ -0.52
RTF1-202ENST00000462276 CAND2O75155 1236 aa11.78□□□□□ -0.52
RTF1-202ENST00000462276 NPTX2P47972 431 aa11.78□□□□□ -0.52
RTF1-202ENST00000462276 IGBP1P78318 339 aa11.78□□□□□ -0.52
RTF1-202ENST00000462276 IRX5P78411 483 aaPredicted RBP11.78□□□□□ -0.52
RTF1-202ENST00000462276 RAD51AP2Q09MP3 1159 aa11.78□□□□□ -0.52
RTF1-202ENST00000462276 STK4Q13043 487 aa11.78□□□□□ -0.52
RTF1-202ENST00000462276 PCBP1Q15365 356 aaKnown RBP eCLIP11.78□□□□□ -0.52
RTF1-202ENST00000462276 BMT2Q1RMZ1 405 aa11.78□□□□□ -0.52
RTF1-202ENST00000462276 MAEAQ7L5Y9 396 aa11.78□□□□□ -0.52
RTF1-202ENST00000462276 ZNF410Q86VK4 478 aa11.78□□□□□ -0.52
RTF1-202ENST00000462276 SFR1Q86XK3 245 aa11.78□□□□□ -0.52
RTF1-202ENST00000462276 MYOCDQ8IZQ8 938 aa11.78□□□□□ -0.52
RTF1-202ENST00000462276 GOLGA5Q8TBA6 731 aa11.78□□□□□ -0.52
RTF1-202ENST00000462276 PRPF31Q8WWY3 499 aaKnown RBP11.78□□□□□ -0.52
RTF1-202ENST00000462276 ERCC4Q92889 916 aaPredicted RBP11.78□□□□□ -0.52
RTF1-202ENST00000462276 TMEM143Q96AN5 459 aa11.78□□□□□ -0.52
RTF1-202ENST00000462276 BPIFA3Q9BQP9 254 aa11.78□□□□□ -0.52
RTF1-202ENST00000462276 SH2D3AQ9BRG2 576 aa11.78□□□□□ -0.52
RTF1-202ENST00000462276 POLR3FQ9H1D9 316 aaPredicted RBP11.78□□□□□ -0.52
RTF1-202ENST00000462276 TMEM206Q9H813 350 aa11.78□□□□□ -0.52
RTF1-202ENST00000462276 CGNQ9P2M7 1197 aaKnown RBP11.78□□□□□ -0.52
RTF1-202ENST00000462276 EXOC7Q9UPT5 735 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms