RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 CHD9Q3L8U1 2897 aa9.93□□□□□ -0.82
LDB1-203ENST00000461873 CARNS1A5YM72 827 aa9.93□□□□□ -0.82
LDB1-203ENST00000461873 ADAMTS3O15072 1205 aa9.93□□□□□ -0.82
LDB1-203ENST00000461873 GPR32O75388 356 aa9.93□□□□□ -0.82
LDB1-203ENST00000461873 MMP1P03956 469 aa9.93□□□□□ -0.82
LDB1-203ENST00000461873 GPC3P51654 580 aa9.93□□□□□ -0.82
LDB1-203ENST00000461873 FOSBP53539 338 aa9.93□□□□□ -0.82
LDB1-203ENST00000461873 UBE3AQ05086 875 aa9.93□□□□□ -0.82
LDB1-203ENST00000461873 CALCRLQ16602 461 aa9.93□□□□□ -0.82
LDB1-203ENST00000461873 LEXMQ3ZCV2 418 aa9.93□□□□□ -0.82
LDB1-203ENST00000461873 TWF2Q6IBS0 349 aaKnown RBP9.93□□□□□ -0.82
LDB1-203ENST00000461873 CATSPER4Q7RTX7 472 aa9.93□□□□□ -0.82
LDB1-203ENST00000461873 RTN4RL1Q86UN2 441 aaPredicted RBP9.93□□□□□ -0.82
LDB1-203ENST00000461873 FAM228AQ86W67 206 aa9.93□□□□□ -0.82
LDB1-203ENST00000461873 KLHL23Q8NBE8 558 aa9.93□□□□□ -0.82
LDB1-203ENST00000461873 POF1BQ8WVV4 589 aa9.93□□□□□ -0.82
LDB1-203ENST00000461873 GTF3C6Q969F1 213 aa9.93□□□□□ -0.82
LDB1-203ENST00000461873 GJA10Q969M2 543 aa9.93□□□□□ -0.82
LDB1-203ENST00000461873 NLRP4Q96MN2 994 aa9.93□□□□□ -0.82
LDB1-203ENST00000461873 MRPL9Q9BYD2 267 aaKnown RBP9.93□□□□□ -0.82
LDB1-203ENST00000461873 NIFKQ9BYG3 293 aaKnown RBP9.93□□□□□ -0.82
LDB1-203ENST00000461873 CDHR5Q9HBB8 845 aa9.93□□□□□ -0.82
LDB1-203ENST00000461873 PCDHA12Q9UN75 941 aa9.93□□□□□ -0.82
LDB1-203ENST00000461873 PLAGL2Q9UPG8 496 aa9.93□□□□□ -0.82
LDB1-203ENST00000461873 PPME1Q9Y570 386 aa9.93□□□□□ -0.82
LDB1-203ENST00000461873 WDR81Q562E7 1941 aa9.93□□□□□ -0.82
LDB1-203ENST00000461873 ZBTB42B2RXF5 422 aa9.92□□□□□ -0.82
LDB1-203ENST00000461873 H3BQ06 376 aaPredicted RBP9.92□□□□□ -0.82
LDB1-203ENST00000461873 GRM6O15303 877 aa9.92□□□□□ -0.82
LDB1-203ENST00000461873 GAS2O43903 313 aaKnown RBP9.92□□□□□ -0.82
LDB1-203ENST00000461873 NEMFO60524 1076 aa9.92□□□□□ -0.82
LDB1-203ENST00000461873 EOMESO95936 686 aa9.92□□□□□ -0.82
LDB1-203ENST00000461873 DARSP14868 501 aaKnown RBP9.92□□□□□ -0.82
LDB1-203ENST00000461873 ATP2B1P20020 1258 aa9.92□□□□□ -0.82
LDB1-203ENST00000461873 PPM1AP35813 382 aa9.92□□□□□ -0.82
LDB1-203ENST00000461873 RFC5P40937 340 aa9.92□□□□□ -0.82
LDB1-203ENST00000461873 ALDH7A1P49419 539 aaKnown RBP9.92□□□□□ -0.82
LDB1-203ENST00000461873 RNASELQ05823 741 aaKnown RBP9.92□□□□□ -0.82
LDB1-203ENST00000461873 PPP2R5CQ13362 524 aa9.92□□□□□ -0.82
LDB1-203ENST00000461873 EPHA7Q15375 998 aa9.92□□□□□ -0.82
LDB1-203ENST00000461873 XKR9Q5GH70 373 aa9.92□□□□□ -0.82
LDB1-203ENST00000461873 PDE12Q6L8Q7 609 aaKnown RBP9.92□□□□□ -0.82
LDB1-203ENST00000461873 ZNF410Q86VK4 478 aa9.92□□□□□ -0.82
LDB1-203ENST00000461873 TPH2Q8IWU9 490 aa9.92□□□□□ -0.82
LDB1-203ENST00000461873 LRRC43Q8N309 656 aa9.92□□□□□ -0.82
LDB1-203ENST00000461873 ETNPPLQ8TBG4 499 aa9.92□□□□□ -0.82
LDB1-203ENST00000461873 TMEM40Q8WWA1 233 aa9.92□□□□□ -0.82
LDB1-203ENST00000461873 PSPC1Q8WXF1 523 aaKnown RBP9.92□□□□□ -0.82
LDB1-203ENST00000461873 RSPH1Q8WYR4 309 aa9.92□□□□□ -0.82
LDB1-203ENST00000461873 PGBD4Q96DM1 585 aa9.92□□□□□ -0.82
LDB1-203ENST00000461873 ZNF668Q96K58 619 aaPredicted RBP9.92□□□□□ -0.82
LDB1-203ENST00000461873 ZSCAN31Q96LW9 406 aaPredicted RBP9.92□□□□□ -0.82
LDB1-203ENST00000461873 NECAB3Q96P71 396 aaPredicted RBP9.92□□□□□ -0.82
LDB1-203ENST00000461873 FAM193BQ96PV7 902 aaPredicted RBP9.92□□□□□ -0.82
LDB1-203ENST00000461873 POP1Q99575 1024 aaKnown RBP9.92□□□□□ -0.82
LDB1-203ENST00000461873 TMEM117Q9H0C3 514 aa9.92□□□□□ -0.82
LDB1-203ENST00000461873 TMX1Q9H3N1 280 aa9.92□□□□□ -0.82
LDB1-203ENST00000461873 ZSWIM4Q9H7M6 989 aa9.92□□□□□ -0.82
LDB1-203ENST00000461873 TLE6Q9H808 572 aa9.92□□□□□ -0.82
LDB1-203ENST00000461873 ENTPD7Q9NQZ7 604 aa9.92□□□□□ -0.82
LDB1-203ENST00000461873 CYP26B1Q9NR63 512 aa9.92□□□□□ -0.82
LDB1-203ENST00000461873 CHST12Q9NRB3 414 aa9.92□□□□□ -0.82
LDB1-203ENST00000461873 LIMCH1Q9UPQ0 1083 aa9.92□□□□□ -0.82
LDB1-203ENST00000461873 PIN4Q9Y237 131 aaKnown RBP9.92□□□□□ -0.82
LDB1-203ENST00000461873 KIF3AQ9Y496 699 aa9.92□□□□□ -0.82
LDB1-203ENST00000461873 COL4A6Q14031 1691 aa9.92□□□□□ -0.82
LDB1-203ENST00000461873 A0A087WZ62 844 aa9.91□□□□□ -0.82
LDB1-203ENST00000461873 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.91□□□□□ -0.82
LDB1-203ENST00000461873 SPDYE4A6NLX3 237 aa9.91□□□□□ -0.82
LDB1-203ENST00000461873 C9IYK1 514 aa9.91□□□□□ -0.82
LDB1-203ENST00000461873 M0R2N6 131 aa9.91□□□□□ -0.82
LDB1-203ENST00000461873 ASAP2O43150 1006 aa9.91□□□□□ -0.82
LDB1-203ENST00000461873 SLC37A4O43826 429 aa9.91□□□□□ -0.82
LDB1-203ENST00000461873 ZNF862O60290 1169 aa9.91□□□□□ -0.82
LDB1-203ENST00000461873 MAFO75444 373 aaPredicted RBP9.91□□□□□ -0.82
LDB1-203ENST00000461873 ERLIN2O94905 339 aa9.91□□□□□ -0.82
LDB1-203ENST00000461873 FGFR1P11362 822 aa9.91□□□□□ -0.82
LDB1-203ENST00000461873 YWHABP31946 246 aaKnown RBP9.91□□□□□ -0.82
LDB1-203ENST00000461873 TXKP42681 527 aa9.91□□□□□ -0.82
LDB1-203ENST00000461873 RAB27AP51159 221 aa9.91□□□□□ -0.82
LDB1-203ENST00000461873 TFDP1Q14186 410 aa9.91□□□□□ -0.82
LDB1-203ENST00000461873 UGCGQ16739 394 aa9.91□□□□□ -0.82
LDB1-203ENST00000461873 ME3Q16798 604 aa9.91□□□□□ -0.82
LDB1-203ENST00000461873 TMEM132AQ24JP5 1023 aa9.91□□□□□ -0.82
LDB1-203ENST00000461873 FAM102BQ5T8I3 360 aa9.91□□□□□ -0.82
LDB1-203ENST00000461873 RBM23Q86U06 439 aaKnown RBP9.91□□□□□ -0.82
LDB1-203ENST00000461873 DIS3L2Q8IYB7 885 aaKnown RBP9.91□□□□□ -0.82
LDB1-203ENST00000461873 HACE1Q8IYU2 909 aa9.91□□□□□ -0.82
LDB1-203ENST00000461873 ERMNQ8TAM6 284 aa9.91□□□□□ -0.82
LDB1-203ENST00000461873 URGCPQ8TCY9 931 aa9.91□□□□□ -0.82
LDB1-203ENST00000461873 NEK9Q8TD19 979 aa9.91□□□□□ -0.82
LDB1-203ENST00000461873 LINC01599Q8WXQ3 324 aa9.91□□□□□ -0.82
LDB1-203ENST00000461873 C8orf76Q96K31 380 aa9.91□□□□□ -0.82
LDB1-203ENST00000461873 MBOAT7Q96N66 472 aa9.91□□□□□ -0.82
LDB1-203ENST00000461873 ZNF558Q96NG5 402 aa9.91□□□□□ -0.82
LDB1-203ENST00000461873 MTRQ99707 1265 aa9.91□□□□□ -0.82
LDB1-203ENST00000461873 SH2D3AQ9BRG2 576 aa9.91□□□□□ -0.82
LDB1-203ENST00000461873 FDXACB1Q9BRP7 624 aaPredicted RBP9.91□□□□□ -0.82
LDB1-203ENST00000461873 LXNQ9BS40 222 aa9.91□□□□□ -0.82
LDB1-203ENST00000461873 TLR9Q9NR96 1032 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms