RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 GRIN2DO15399 1336 aa5.98□□□□□ -1.45
BRCA1-206ENST00000461574 MINDY4BA8MYZ0 360 aa5.97□□□□□ -1.45
BRCA1-206ENST00000461574 BAIAP3O94812 1187 aa5.97□□□□□ -1.45
BRCA1-206ENST00000461574 ALAS1P13196 640 aa5.97□□□□□ -1.45
BRCA1-206ENST00000461574 ADD2P35612 726 aa5.97□□□□□ -1.45
BRCA1-206ENST00000461574 NKX3-2P78367 333 aa5.97□□□□□ -1.45
BRCA1-206ENST00000461574 BFSP2Q13515 415 aa5.97□□□□□ -1.45
BRCA1-206ENST00000461574 IQSEC1Q6DN90 963 aa5.97□□□□□ -1.45
BRCA1-206ENST00000461574 ZSCAN25Q6NSZ9 544 aa5.97□□□□□ -1.45
BRCA1-206ENST00000461574 FDX2Q6P4F2 183 aa5.97□□□□□ -1.45
BRCA1-206ENST00000461574 CTR9Q6PD62 1173 aa5.97□□□□□ -1.45
BRCA1-206ENST00000461574 NSMFQ6X4W1 530 aa5.97□□□□□ -1.45
BRCA1-206ENST00000461574 EP400NLQ6ZTU2 488 aa5.97□□□□□ -1.45
BRCA1-206ENST00000461574 ZNF444Q8N0Y2 327 aaPredicted RBP5.97□□□□□ -1.45
BRCA1-206ENST00000461574 FAM133AQ8N9E0 248 aa5.97□□□□□ -1.45
BRCA1-206ENST00000461574 C1orf127Q8N9H9 656 aa5.97□□□□□ -1.45
BRCA1-206ENST00000461574 MFSD14AQ96MC6 490 aa5.97□□□□□ -1.45
BRCA1-206ENST00000461574 HHIPQ96QV1 700 aa5.97□□□□□ -1.45
BRCA1-206ENST00000461574 MTG1Q9BT17 334 aaPredicted RBP5.97□□□□□ -1.45
BRCA1-206ENST00000461574 RUSC1Q9BVN2 902 aa5.97□□□□□ -1.45
BRCA1-206ENST00000461574 KATNBL1Q9H079 304 aa5.97□□□□□ -1.45
BRCA1-206ENST00000461574 UBE2ZQ9H832 354 aaPredicted RBP5.97□□□□□ -1.45
BRCA1-206ENST00000461574 VTA1Q9NP79 307 aa5.97□□□□□ -1.45
BRCA1-206ENST00000461574 OSGEPQ9NPF4 335 aa5.97□□□□□ -1.45
BRCA1-206ENST00000461574 A1CFQ9NQ94 594 aaKnown RBP5.97□□□□□ -1.45
BRCA1-206ENST00000461574 PDGFCQ9NRA1 345 aa5.97□□□□□ -1.45
BRCA1-206ENST00000461574 DZANK1Q9NVP4 752 aa5.97□□□□□ -1.45
BRCA1-206ENST00000461574 NYAP2Q9P242 653 aa5.97□□□□□ -1.45
BRCA1-206ENST00000461574 SEPT3Q9UH03 358 aa5.97□□□□□ -1.45
BRCA1-206ENST00000461574 ADGRE2Q9UHX3 823 aa5.97□□□□□ -1.45
BRCA1-206ENST00000461574 GNEQ9Y223 722 aaKnown RBP5.97□□□□□ -1.45
BRCA1-206ENST00000461574 LCTP09848 1927 aa5.97□□□□□ -1.45
BRCA1-206ENST00000461574 NLRC5Q86WI3 1866 aa5.96□□□□□ -1.45
BRCA1-206ENST00000461574 TMEM232C9JQI7 657 aa5.96□□□□□ -1.46
BRCA1-206ENST00000461574 PDE2AO00408 941 aaPredicted RBP5.96□□□□□ -1.46
BRCA1-206ENST00000461574 DCXO43602 365 aa5.96□□□□□ -1.46
BRCA1-206ENST00000461574 TTLL1O95922 423 aa5.96□□□□□ -1.46
BRCA1-206ENST00000461574 TSPY3P0CV98 308 aa5.96□□□□□ -1.46
BRCA1-206ENST00000461574 TSPY8P0CW00 308 aa5.96□□□□□ -1.46
BRCA1-206ENST00000461574 PTGS1P23219 599 aa5.96□□□□□ -1.46
BRCA1-206ENST00000461574 TDO2P48775 406 aa5.96□□□□□ -1.46
BRCA1-206ENST00000461574 NHLH1Q02575 133 aa5.96□□□□□ -1.46
BRCA1-206ENST00000461574 CEP85Q6P2H3 762 aa5.96□□□□□ -1.46
BRCA1-206ENST00000461574 FAM160B2Q86V87 743 aa5.96□□□□□ -1.46
BRCA1-206ENST00000461574 FAM178BQ8IXR5 827 aa5.96□□□□□ -1.46
BRCA1-206ENST00000461574 OR6J1Q8NGC5 347 aa5.96□□□□□ -1.46
BRCA1-206ENST00000461574 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.96□□□□□ -1.46
BRCA1-206ENST00000461574 CHURC1Q8WUH1 139 aa5.96□□□□□ -1.46
BRCA1-206ENST00000461574 CHMP4CQ96CF2 233 aa5.96□□□□□ -1.46
BRCA1-206ENST00000461574 KIF1BPQ96EK5 621 aa5.96□□□□□ -1.46
BRCA1-206ENST00000461574 CEP95Q96GE4 821 aa5.96□□□□□ -1.46
BRCA1-206ENST00000461574 MPHOSPH6Q99547 160 aaKnown RBP5.96□□□□□ -1.46
BRCA1-206ENST00000461574 BOLA2Q9H3K6 86 aa5.96□□□□□ -1.46
BRCA1-206ENST00000461574 CD320Q9NPF0 282 aa5.96□□□□□ -1.46
BRCA1-206ENST00000461574 LMCD1Q9NZU5 365 aa5.96□□□□□ -1.46
BRCA1-206ENST00000461574 ADD3Q9UEY8 706 aaKnown RBP5.96□□□□□ -1.46
BRCA1-206ENST00000461574 FAM50BQ9Y247 325 aa5.96□□□□□ -1.46
BRCA1-206ENST00000461574 HIF3AQ9Y2N7 669 aa5.96□□□□□ -1.46
BRCA1-206ENST00000461574 Q9Y3F1 56 aa5.96□□□□□ -1.46
BRCA1-206ENST00000461574 DDX49Q9Y6V7 483 aaKnown RBP5.96□□□□□ -1.46
BRCA1-206ENST00000461574 TET1Q8NFU7 2136 aa5.96□□□□□ -1.46
BRCA1-206ENST00000461574 USP34Q70CQ2 3546 aa5.96□□□□□ -1.46
BRCA1-206ENST00000461574 ZBED9Q6R2W3 1325 aa5.96□□□□□ -1.46
BRCA1-206ENST00000461574 SCN10AQ9Y5Y9 1956 aa5.95□□□□□ -1.46
BRCA1-206ENST00000461574 WDR87Q6ZQQ6 2873 aa5.95□□□□□ -1.46
BRCA1-206ENST00000461574 LCHNA4D1U4 455 aa5.95□□□□□ -1.46
BRCA1-206ENST00000461574 GAS2O43903 313 aaKnown RBP5.95□□□□□ -1.46
BRCA1-206ENST00000461574 ATG7O95352 703 aa5.95□□□□□ -1.46
BRCA1-206ENST00000461574 APPP05067 770 aa5.95□□□□□ -1.46
BRCA1-206ENST00000461574 IQCF3P0C7M6 154 aa5.95□□□□□ -1.46
BRCA1-206ENST00000461574 IL9P15248 144 aa5.95□□□□□ -1.46
BRCA1-206ENST00000461574 CES1P23141 567 aa5.95□□□□□ -1.46
BRCA1-206ENST00000461574 MAP4P27816 1152 aaKnown RBP5.95□□□□□ -1.46
BRCA1-206ENST00000461574 SLC1A4P43007 532 aa5.95□□□□□ -1.46
BRCA1-206ENST00000461574 PURAQ00577 322 aaKnown RBP5.95□□□□□ -1.46
BRCA1-206ENST00000461574 PPP2R5BQ15173 497 aa5.95□□□□□ -1.46
BRCA1-206ENST00000461574 UBE3CQ15386 1083 aa5.95□□□□□ -1.46
BRCA1-206ENST00000461574 LRRFIP1Q32MZ4 808 aaKnown RBP5.95□□□□□ -1.46
BRCA1-206ENST00000461574 TKFCQ3LXA3 575 aa5.95□□□□□ -1.46
BRCA1-206ENST00000461574 LEXMQ3ZCV2 418 aa5.95□□□□□ -1.46
BRCA1-206ENST00000461574 DUSP28Q4G0W2 176 aa5.95□□□□□ -1.46
BRCA1-206ENST00000461574 SGO2Q562F6 1265 aa5.95□□□□□ -1.46
BRCA1-206ENST00000461574 SLFN13Q68D06 897 aa5.95□□□□□ -1.46
BRCA1-206ENST00000461574 TAPT1Q6NXT6 567 aa5.95□□□□□ -1.46
BRCA1-206ENST00000461574 SPRED2Q7Z698 418 aa5.95□□□□□ -1.46
BRCA1-206ENST00000461574 TMCO2Q7Z6W1 182 aaPredicted RBP5.95□□□□□ -1.46
BRCA1-206ENST00000461574 RPAP2Q8IXW5 612 aaPredicted RBP5.95□□□□□ -1.46
BRCA1-206ENST00000461574 GMCL1P1Q8NEA9 526 aa5.95□□□□□ -1.46
BRCA1-206ENST00000461574 PPP1R13LQ8WUF5 828 aa5.95□□□□□ -1.46
BRCA1-206ENST00000461574 CLP1Q92989 425 aaKnown RBP5.95□□□□□ -1.46
BRCA1-206ENST00000461574 FBXL18Q96ME1 805 aa5.95□□□□□ -1.46
BRCA1-206ENST00000461574 TGS1Q96RS0 853 aaKnown RBP5.95□□□□□ -1.46
BRCA1-206ENST00000461574 WDR11Q9BZH6 1224 aa5.95□□□□□ -1.46
BRCA1-206ENST00000461574 KCNH6Q9H252 994 aa5.95□□□□□ -1.46
BRCA1-206ENST00000461574 CCPG1Q9ULG6 757 aa5.95□□□□□ -1.46
BRCA1-206ENST00000461574 SYNPO2Q9UMS6 1093 aa5.95□□□□□ -1.46
BRCA1-206ENST00000461574 SOX13Q9UN79 622 aa5.95□□□□□ -1.46
BRCA1-206ENST00000461574 MTMR7Q9Y216 660 aa5.95□□□□□ -1.46
BRCA1-206ENST00000461574 PTPDC1A2A3K4 754 aa5.94□□□□□ -1.46
BRCA1-206ENST00000461574 MEGF11A6BM72 1044 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms