RNA–Protein interactions for RNA: ENST00000461489.1

COL21A1-205, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 4

Gene COL21A1, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-205ENST00000461489 CCDC163A0A0D9SF12 145 aa5.76□□□□□ -1.49
COL21A1-205ENST00000461489 KCNA6P17658 529 aa5.76□□□□□ -1.49
COL21A1-205ENST00000461489 ADCY7P51828 1080 aa5.76□□□□□ -1.49
COL21A1-205ENST00000461489 SLC6A3Q01959 620 aa5.76□□□□□ -1.49
COL21A1-205ENST00000461489 ROM1Q03395 351 aa5.76□□□□□ -1.49
COL21A1-205ENST00000461489 CNGB1Q14028 1251 aaPredicted RBP5.76□□□□□ -1.49
COL21A1-205ENST00000461489 RPL10LQ96L21 214 aaKnown RBP5.76□□□□□ -1.49
COL21A1-205ENST00000461489 SLC2A4RGQ9NR83 387 aa5.76□□□□□ -1.49
COL21A1-205ENST00000461489 ZBTB48P10074 688 aaPredicted RBP5.75□□□□□ -1.49
COL21A1-205ENST00000461489 FNTBP49356 437 aa5.75□□□□□ -1.49
COL21A1-205ENST00000461489 RGS3P49796 1198 aa5.75□□□□□ -1.49
COL21A1-205ENST00000461489 BPIFB4P59827 614 aa5.75□□□□□ -1.49
COL21A1-205ENST00000461489 DGKDQ16760 1214 aa5.75□□□□□ -1.49
COL21A1-205ENST00000461489 ARHGAP44Q17R89 818 aa5.75□□□□□ -1.49
COL21A1-205ENST00000461489 GAREM2Q75VX8 874 aa5.75□□□□□ -1.49
COL21A1-205ENST00000461489 LDLRAD3Q86YD5 345 aa5.75□□□□□ -1.49
COL21A1-205ENST00000461489 ANKRD53Q8N9V6 530 aa5.75□□□□□ -1.49
COL21A1-205ENST00000461489 OR5AN1Q8NGI8 311 aa5.75□□□□□ -1.49
COL21A1-205ENST00000461489 THAP3Q8WTV1 239 aaPredicted RBP5.75□□□□□ -1.49
COL21A1-205ENST00000461489 KCNQ2O43526 872 aa5.74□□□□□ -1.49
COL21A1-205ENST00000461489 PRLP01236 227 aa5.74□□□□□ -1.49
COL21A1-205ENST00000461489 SCNN1GP51170 649 aa5.74□□□□□ -1.49
COL21A1-205ENST00000461489 KIF11P52732 1056 aa5.74□□□□□ -1.49
COL21A1-205ENST00000461489 TCIRG1Q13488 830 aa5.74□□□□□ -1.49
COL21A1-205ENST00000461489 Q6ZRM9 215 aa5.74□□□□□ -1.49
COL21A1-205ENST00000461489 ZNF662Q6ZS27 426 aa5.74□□□□□ -1.49
COL21A1-205ENST00000461489 OTOP1Q7RTM1 612 aa5.74□□□□□ -1.49
COL21A1-205ENST00000461489 MRGPRGQ86SM5 289 aa5.74□□□□□ -1.49
COL21A1-205ENST00000461489 DDX53Q86TM3 631 aaKnown RBP5.74□□□□□ -1.49
COL21A1-205ENST00000461489 GSPT2Q8IYD1 628 aaKnown RBP5.74□□□□□ -1.49
COL21A1-205ENST00000461489 MIEF2Q96C03 454 aa5.74□□□□□ -1.49
COL21A1-205ENST00000461489 ARMC5Q96C12 935 aa5.74□□□□□ -1.49
COL21A1-205ENST00000461489 GPHA2Q96T91 129 aa5.74□□□□□ -1.49
COL21A1-205ENST00000461489 TRIM39Q9HCM9 518 aa5.74□□□□□ -1.49
COL21A1-205ENST00000461489 UBA6A0AVT1 1052 aaPredicted RBP5.73□□□□□ -1.49
COL21A1-205ENST00000461489 C2orf78A6NCI8 922 aa5.73□□□□□ -1.49
COL21A1-205ENST00000461489 M0R2C6 588 aa5.73□□□□□ -1.49
COL21A1-205ENST00000461489 PEX11BO96011 259 aa5.73□□□□□ -1.49
COL21A1-205ENST00000461489 MAN2A2P49641 1150 aa5.73□□□□□ -1.49
COL21A1-205ENST00000461489 ANTXR2P58335 489 aa5.73□□□□□ -1.49
COL21A1-205ENST00000461489 RBL2Q08999 1139 aa5.73□□□□□ -1.49
COL21A1-205ENST00000461489 ELAVL1Q15717 326 aaKnown RBP5.73□□□□□ -1.49
COL21A1-205ENST00000461489 SLFN12LQ6IEE8 588 aa5.73□□□□□ -1.49
COL21A1-205ENST00000461489 FAM111BQ6SJ93 734 aa5.73□□□□□ -1.49
COL21A1-205ENST00000461489 ZNF627Q7L945 461 aa5.73□□□□□ -1.49
COL21A1-205ENST00000461489 TCF25Q9BQ70 676 aa5.73□□□□□ -1.49
COL21A1-205ENST00000461489 PCIF1Q9H4Z3 704 aa5.73□□□□□ -1.49
COL21A1-205ENST00000461489 NCOA5Q9HCD5 579 aaKnown RBP5.73□□□□□ -1.49
COL21A1-205ENST00000461489 RCAN3Q9UKA8 241 aa5.73□□□□□ -1.49
COL21A1-205ENST00000461489 PTCH2Q9Y6C5 1203 aa5.73□□□□□ -1.49
COL21A1-205ENST00000461489 UBE2QL1A1L167 161 aa5.72□□□□□ -1.49
COL21A1-205ENST00000461489 B4E1Z4 1266 aa5.72□□□□□ -1.49
COL21A1-205ENST00000461489 TTC38Q5R3I4 469 aa5.72□□□□□ -1.49
COL21A1-205ENST00000461489 PRAMEF9Q5VWM5 478 aa5.72□□□□□ -1.49
COL21A1-205ENST00000461489 KRT40Q6A162 431 aa5.72□□□□□ -1.49
COL21A1-205ENST00000461489 JMYQ8N9B5 988 aa5.72□□□□□ -1.49
COL21A1-205ENST00000461489 MAML3Q96JK9 1138 aa5.72□□□□□ -1.49
COL21A1-205ENST00000461489 C8orf37Q96NL8 207 aa5.72□□□□□ -1.49
COL21A1-205ENST00000461489 ACSS2Q9NR19 701 aa5.72□□□□□ -1.49
COL21A1-205ENST00000461489 KCMF1Q9P0J7 381 aa5.72□□□□□ -1.49
COL21A1-205ENST00000461489 SAMD15Q9P1V8 674 aa5.72□□□□□ -1.49
COL21A1-205ENST00000461489 RAMP2O60895 175 aa5.71□□□□□ -1.5
COL21A1-205ENST00000461489 RPS6KA4O75676 772 aa5.71□□□□□ -1.5
COL21A1-205ENST00000461489 MECP2P51608 486 aaKnown RBP5.71□□□□□ -1.5
COL21A1-205ENST00000461489 NANOS3P60323 173 aaKnown RBP5.71□□□□□ -1.5
COL21A1-205ENST00000461489 ADAM8P78325 824 aa5.71□□□□□ -1.5
COL21A1-205ENST00000461489 SLC25A3Q00325 362 aa5.71□□□□□ -1.5
COL21A1-205ENST00000461489 GAGE13Q4V321 117 aa5.71□□□□□ -1.5
COL21A1-205ENST00000461489 C2orf27AQ580R0 203 aa5.71□□□□□ -1.5
COL21A1-205ENST00000461489 ZCCHC8Q6NZY4 707 aaKnown RBP5.71□□□□□ -1.5
COL21A1-205ENST00000461489 CHST14Q8NCH0 376 aa5.71□□□□□ -1.5
COL21A1-205ENST00000461489 NKD2Q969F2 451 aaPredicted RBP5.71□□□□□ -1.5
COL21A1-205ENST00000461489 MKL1Q969V6 931 aa5.71□□□□□ -1.5
COL21A1-205ENST00000461489 ZG16BQ96DA0 208 aa5.71□□□□□ -1.5
COL21A1-205ENST00000461489 DYDC2Q96IM9 177 aa5.71□□□□□ -1.5
COL21A1-205ENST00000461489 WDR92Q96MX6 357 aa5.71□□□□□ -1.5
COL21A1-205ENST00000461489 TUBGCP5Q96RT8 1024 aa5.71□□□□□ -1.5
COL21A1-205ENST00000461489 PRRX2Q99811 253 aa5.71□□□□□ -1.5
COL21A1-205ENST00000461489 GPR87Q9BY21 358 aa5.71□□□□□ -1.5
COL21A1-205ENST00000461489 IL23AQ9NPF7 189 aa5.71□□□□□ -1.5
COL21A1-205ENST00000461489 POLR3BQ9NW08 1133 aaPredicted RBP5.71□□□□□ -1.5
COL21A1-205ENST00000461489 H7C1D1 291 aa5.7□□□□□ -1.5
COL21A1-205ENST00000461489 DVL2O14641 736 aa5.7□□□□□ -1.5
COL21A1-205ENST00000461489 PLD2O14939 933 aa5.7□□□□□ -1.5
COL21A1-205ENST00000461489 PPFIA2O75334 1257 aa5.7□□□□□ -1.5
COL21A1-205ENST00000461489 GLRX3O76003 335 aaKnown RBP5.7□□□□□ -1.5
COL21A1-205ENST00000461489 RAPGEF3O95398 923 aa5.7□□□□□ -1.5
COL21A1-205ENST00000461489 SMAD3P84022 425 aaKnown RBP5.7□□□□□ -1.5
COL21A1-205ENST00000461489 ZNF174Q15697 407 aa5.7□□□□□ -1.5
COL21A1-205ENST00000461489 FKBP15Q5T1M5 1219 aa5.7□□□□□ -1.5
COL21A1-205ENST00000461489 SOGA3Q5TF21 947 aa5.7□□□□□ -1.5
COL21A1-205ENST00000461489 DNAJC10Q8IXB1 793 aa5.7□□□□□ -1.5
COL21A1-205ENST00000461489 PLA2G15Q8NCC3 412 aa5.7□□□□□ -1.5
COL21A1-205ENST00000461489 PMFBP1Q8TBY8 1022 aa5.7□□□□□ -1.5
COL21A1-205ENST00000461489 RPGRQ92834 1020 aaKnown RBP5.7□□□□□ -1.5
COL21A1-205ENST00000461489 ARL8AQ96BM9 186 aa5.7□□□□□ -1.5
COL21A1-205ENST00000461489 AGAP2Q99490 1192 aa5.7□□□□□ -1.5
COL21A1-205ENST00000461489 TTPALQ9BTX7 342 aa5.7□□□□□ -1.5
COL21A1-205ENST00000461489 NRDE2Q9H7Z3 1164 aa5.7□□□□□ -1.5
COL21A1-205ENST00000461489 CABP5Q9NP86 173 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms