RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 CHN1P15882 459 aa15.59■□□□□ 0.09
NCL-207ENST00000461347 CYP11B2P19099 503 aa15.59■□□□□ 0.09
NCL-207ENST00000461347 NPY5RQ15761 445 aa15.59■□□□□ 0.09
NCL-207ENST00000461347 EDRF1Q3B7T1 1238 aa15.59■□□□□ 0.09
NCL-207ENST00000461347 MEI1Q5TIA1 1274 aa15.59■□□□□ 0.09
NCL-207ENST00000461347 FYB2Q5VWT5 728 aa15.59■□□□□ 0.09
NCL-207ENST00000461347 FAM47EQ6ZV65 393 aa15.59■□□□□ 0.09
NCL-207ENST00000461347 CXorf56Q9H5V9 222 aa15.59■□□□□ 0.09
NCL-207ENST00000461347 DBNDD1Q9H9R9 158 aa15.59■□□□□ 0.09
NCL-207ENST00000461347 JMJD4Q9H9V9 463 aa15.59■□□□□ 0.09
NCL-207ENST00000461347 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.59■□□□□ 0.093e-29■□□□□ 9.3
NCL-207ENST00000461347 CHORDC1Q9UHD1 332 aaPredicted RBP15.59■□□□□ 0.09
NCL-207ENST00000461347 MRC1P22897 1456 aa15.58■□□□□ 0.09
NCL-207ENST00000461347 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.58■□□□□ 0.09
NCL-207ENST00000461347 ESYT2A0FGR8 921 aa15.58■□□□□ 0.09
NCL-207ENST00000461347 PODXLO00592 558 aa15.58■□□□□ 0.09
NCL-207ENST00000461347 ERVK-9P63128 1117 aa15.58■□□□□ 0.09
NCL-207ENST00000461347 XKR9Q5GH70 373 aa15.58■□□□□ 0.09
NCL-207ENST00000461347 CCDC137Q6PK04 289 aaKnown RBP15.58■□□□□ 0.09
NCL-207ENST00000461347 RPAINQ86UA6 219 aa15.58■□□□□ 0.09
NCL-207ENST00000461347 TPCN2Q8NHX9 752 aa15.58■□□□□ 0.09
NCL-207ENST00000461347 XPO6Q96QU8 1125 aaKnown RBP15.58■□□□□ 0.09
NCL-207ENST00000461347 UBXN6Q9BZV1 441 aa15.58■□□□□ 0.09
NCL-207ENST00000461347 ZNF148Q9UQR1 794 aa15.58■□□□□ 0.09
NCL-207ENST00000461347 GPSM2P81274 684 aa15.58■□□□□ 0.08
NCL-207ENST00000461347 TMED2Q15363 201 aa15.58■□□□□ 0.08
NCL-207ENST00000461347 PPP1R18Q6NYC8 613 aa15.58■□□□□ 0.08
NCL-207ENST00000461347 ZNF571Q7Z3V5 609 aaPredicted RBP15.58■□□□□ 0.08
NCL-207ENST00000461347 C4orf32Q8N8J7 132 aa15.58■□□□□ 0.08
NCL-207ENST00000461347 ARHGEF1Q92888 912 aaKnown RBP15.58■□□□□ 0.08
NCL-207ENST00000461347 CALR3Q96L12 384 aaKnown RBP15.58■□□□□ 0.08
NCL-207ENST00000461347 SESN3P58005 492 aa15.58■□□□□ 0.08
NCL-207ENST00000461347 AP3B2Q13367 1082 aa15.58■□□□□ 0.08
NCL-207ENST00000461347 BYSLQ13895 437 aaKnown RBP15.58■□□□□ 0.08
NCL-207ENST00000461347 KIAA1755Q5JYT7 1200 aa15.58■□□□□ 0.08
NCL-207ENST00000461347 SYDE2Q5VT97 1194 aa15.58■□□□□ 0.08
NCL-207ENST00000461347 LMNTD2Q8IXW0 634 aa15.58■□□□□ 0.08
NCL-207ENST00000461347 NT5C1BQ96P26 610 aa15.58■□□□□ 0.08
NCL-207ENST00000461347 ANAPC5Q9UJX4 755 aa15.58■□□□□ 0.08
NCL-207ENST00000461347 ZNF233A6NK53 670 aa15.57■□□□□ 0.08
NCL-207ENST00000461347 MIF4GDA9UHW6 222 aaKnown RBP15.57■□□□□ 0.08
NCL-207ENST00000461347 TRIM37O94972 964 aa15.57■□□□□ 0.08
NCL-207ENST00000461347 TRIM59Q8IWR1 403 aa15.57■□□□□ 0.08
NCL-207ENST00000461347 GRK7Q8WTQ7 553 aa15.57■□□□□ 0.08
NCL-207ENST00000461347 MCUR1Q96AQ8 359 aa15.57■□□□□ 0.08
NCL-207ENST00000461347 DYDC2Q96IM9 177 aa15.57■□□□□ 0.08
NCL-207ENST00000461347 INTS2Q9H0H0 1204 aaKnown RBP15.57■□□□□ 0.08
NCL-207ENST00000461347 TMBIM4Q9HC24 238 aa15.57■□□□□ 0.08
NCL-207ENST00000461347 BBOX1O75936 387 aa15.57■□□□□ 0.08
NCL-207ENST00000461347 CASP4P49662 377 aa15.57■□□□□ 0.08
NCL-207ENST00000461347 SCFD1Q8WVM8 642 aa15.57■□□□□ 0.08
NCL-207ENST00000461347 STMN2Q93045 179 aa15.57■□□□□ 0.08
NCL-207ENST00000461347 MFAP3P55082 362 aa15.57■□□□□ 0.08
NCL-207ENST00000461347 RWDD2BP57060 319 aa15.57■□□□□ 0.08
NCL-207ENST00000461347 GPC5P78333 572 aa15.57■□□□□ 0.08
NCL-207ENST00000461347 TRADDQ15628 312 aa15.57■□□□□ 0.08
NCL-207ENST00000461347 ZC2HC1CQ53FD0 456 aaPredicted RBP15.57■□□□□ 0.08
NCL-207ENST00000461347 SRRM1Q8IYB3 904 aaKnown RBP15.57■□□□□ 0.08
NCL-207ENST00000461347 RPUSD2Q8IZ73 545 aaKnown RBP15.57■□□□□ 0.08
NCL-207ENST00000461347 LINC00116Q8NCU8 138 aa15.57■□□□□ 0.08
NCL-207ENST00000461347 MED1Q15648 1581 aaPredicted RBP15.56■□□□□ 0.08
NCL-207ENST00000461347 COL18A1P39060 1754 aa15.56■□□□□ 0.08
NCL-207ENST00000461347 AGPSO00116 658 aa15.56■□□□□ 0.08
NCL-207ENST00000461347 CHURC1Q8WUH1 139 aa15.56■□□□□ 0.08
NCL-207ENST00000461347 RAPGEF5Q92565 580 aa15.56■□□□□ 0.08
NCL-207ENST00000461347 PRMT1Q99873 361 aaKnown RBP15.56■□□□□ 0.08
NCL-207ENST00000461347 EIF2AK1Q9BQI3 630 aaKnown RBP15.56■□□□□ 0.08
NCL-207ENST00000461347 C1orf112Q9NSG2 853 aa15.56■□□□□ 0.08
NCL-207ENST00000461347 KDM3BQ7LBC6 1761 aa15.56■□□□□ 0.08
NCL-207ENST00000461347 FAM187AA6NFU0 413 aa15.56■□□□□ 0.08
NCL-207ENST00000461347 RSPH10B2B2RC85 870 aa15.56■□□□□ 0.08
NCL-207ENST00000461347 RSPH10BP0C881 870 aa15.56■□□□□ 0.08
NCL-207ENST00000461347 NSFP46459 744 aaKnown RBP15.56■□□□□ 0.08
NCL-207ENST00000461347 PPP2R5AQ15172 486 aa15.56■□□□□ 0.08
NCL-207ENST00000461347 NBPF9Q3BBW0 867 aa15.56■□□□□ 0.08
NCL-207ENST00000461347 PPFIBP2Q8ND30 876 aa15.56■□□□□ 0.08
NCL-207ENST00000461347 FAM20AQ96MK3 541 aa15.56■□□□□ 0.08
NCL-207ENST00000461347 HEMGNQ9BXL5 484 aa15.56■□□□□ 0.08
NCL-207ENST00000461347 DBR1Q9UK59 544 aaKnown RBP15.56■□□□□ 0.08
NCL-207ENST00000461347 DAGLAQ9Y4D2 1042 aa15.56■□□□□ 0.08
NCL-207ENST00000461347 COL5A2P05997 1499 aaPredicted RBP15.56■□□□□ 0.08
NCL-207ENST00000461347 PJA2O43164 708 aa15.56■□□□□ 0.08
NCL-207ENST00000461347 FECHP22830 423 aa15.56■□□□□ 0.08
NCL-207ENST00000461347 KCNJ1P48048 391 aa15.56■□□□□ 0.08
NCL-207ENST00000461347 IL9RQ01113 521 aa15.56■□□□□ 0.08
NCL-207ENST00000461347 AGBL2Q5U5Z8 902 aa15.56■□□□□ 0.08
NCL-207ENST00000461347 VPS52Q8N1B4 723 aa15.56■□□□□ 0.08
NCL-207ENST00000461347 POMGNT1Q8WZA1 660 aa15.56■□□□□ 0.08
NCL-207ENST00000461347 SHISA4Q96DD7 197 aa15.56■□□□□ 0.08
NCL-207ENST00000461347 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.56■□□□□ 0.08
NCL-207ENST00000461347 OSGEPQ9NPF4 335 aa15.56■□□□□ 0.08
NCL-207ENST00000461347 PPP1R1BQ9UD71 204 aaPredicted RBP15.56■□□□□ 0.08
NCL-207ENST00000461347 DIS3Q9Y2L1 958 aaKnown RBP15.56■□□□□ 0.08
NCL-207ENST00000461347 PON1P27169 355 aa15.55■□□□□ 0.08
NCL-207ENST00000461347 CHRNA3P32297 505 aa15.55■□□□□ 0.08
NCL-207ENST00000461347 SKOR1P84550 965 aa15.55■□□□□ 0.08
NCL-207ENST00000461347 DRP2Q13474 957 aa15.55■□□□□ 0.08
NCL-207ENST00000461347 SLC29A2Q14542 456 aa15.55■□□□□ 0.08
NCL-207ENST00000461347 ARHGEF18Q6ZSZ5 1173 aa15.55■□□□□ 0.08
NCL-207ENST00000461347 JAMLQ86YT9 394 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms