RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 CMTR2Q8IYT2 770 aaKnown RBP17.22■□□□□ 0.35
VARS-219ENST00000461328 MRPL38Q96DV4 380 aaKnown RBP17.22■□□□□ 0.35
VARS-219ENST00000461328 ZNF668Q96K58 619 aaPredicted RBP17.22■□□□□ 0.35
VARS-219ENST00000461328 CCDC43Q96MW1 224 aaKnown RBP17.22■□□□□ 0.35
VARS-219ENST00000461328 ADAMTS10Q9H324 1103 aa17.22■□□□□ 0.35
VARS-219ENST00000461328 RNF216Q9NWF9 866 aaPredicted RBP17.22■□□□□ 0.35
VARS-219ENST00000461328 RGL1Q9NZL6 768 aa17.22■□□□□ 0.35
VARS-219ENST00000461328 COG5Q9UP83 839 aa17.22■□□□□ 0.35
VARS-219ENST00000461328 PCDHB7Q9Y5E2 793 aa17.22■□□□□ 0.35
VARS-219ENST00000461328 OR52Z1P0C646 297 aa17.21■□□□□ 0.35
VARS-219ENST00000461328 EIF4BP23588 611 aaKnown RBP17.21■□□□□ 0.35
VARS-219ENST00000461328 BMPR1AP36894 532 aa17.21■□□□□ 0.35
VARS-219ENST00000461328 TRAPPC10P48553 1259 aa17.21■□□□□ 0.35
VARS-219ENST00000461328 DNM2P50570 870 aa17.21■□□□□ 0.35
VARS-219ENST00000461328 TFF2Q03403 129 aa17.21■□□□□ 0.35
VARS-219ENST00000461328 SPIRE1Q08AE8 756 aa17.21■□□□□ 0.35
VARS-219ENST00000461328 ORC2Q13416 577 aaPredicted RBP17.21■□□□□ 0.35
VARS-219ENST00000461328 PAN2Q504Q3 1202 aaKnown RBP17.21■□□□□ 0.35
VARS-219ENST00000461328 SLC24A5Q71RS6 500 aa17.21■□□□□ 0.35
VARS-219ENST00000461328 TPH2Q8IWU9 490 aa17.21■□□□□ 0.35
VARS-219ENST00000461328 CRIPAKQ8N1N5 446 aa17.21■□□□□ 0.35
VARS-219ENST00000461328 NLRP7Q8WX94 980 aa17.21■□□□□ 0.35
VARS-219ENST00000461328 HLA-CQ95604 372 aa17.21■□□□□ 0.35
VARS-219ENST00000461328 CEP170P1Q96L14 293 aa17.21■□□□□ 0.35
VARS-219ENST00000461328 EIF2AK1Q9BQI3 630 aaKnown RBP17.21■□□□□ 0.35
VARS-219ENST00000461328 JPH2Q9BR39 696 aaPredicted RBP17.21■□□□□ 0.35
VARS-219ENST00000461328 TMEM60Q9H2L4 133 aa17.21■□□□□ 0.35
VARS-219ENST00000461328 ZSWIM4Q9H7M6 989 aa17.21■□□□□ 0.35
VARS-219ENST00000461328 RGS18Q9NS28 235 aa17.21■□□□□ 0.35
VARS-219ENST00000461328 RALGAPA2Q2PPJ7 1873 aa17.2■□□□□ 0.34
VARS-219ENST00000461328 NLRC5Q86WI3 1866 aa17.2■□□□□ 0.34
VARS-219ENST00000461328 REV3LO60673 3130 aa17.2■□□□□ 0.34
VARS-219ENST00000461328 POTEMA6NI47 508 aa17.2■□□□□ 0.34
VARS-219ENST00000461328 RB1P06400 928 aa17.2■□□□□ 0.34
VARS-219ENST00000461328 LINC00271P0C7V0 271 aa17.2■□□□□ 0.34
VARS-219ENST00000461328 YWHABP31946 246 aaKnown RBP17.2■□□□□ 0.34
VARS-219ENST00000461328 GPC3P51654 580 aa17.2■□□□□ 0.34
VARS-219ENST00000461328 POLGP54098 1239 aaPredicted RBP17.2■□□□□ 0.34
VARS-219ENST00000461328 DRP2Q13474 957 aa17.2■□□□□ 0.34
VARS-219ENST00000461328 ANO5Q75V66 913 aa17.2■□□□□ 0.34
VARS-219ENST00000461328 OTUD6AQ7L8S5 288 aa17.2■□□□□ 0.34
VARS-219ENST00000461328 C4orf19Q8IY42 314 aa17.2■□□□□ 0.34
VARS-219ENST00000461328 NEK9Q8TD19 979 aa17.2■□□□□ 0.34
VARS-219ENST00000461328 SLC7A3Q8WY07 619 aa17.2■□□□□ 0.34
VARS-219ENST00000461328 CLP1Q92989 425 aaKnown RBP17.2■□□□□ 0.34
VARS-219ENST00000461328 MTMR9Q96QG7 549 aa17.2■□□□□ 0.34
VARS-219ENST00000461328 C11orf84Q9BUA3 381 aaPredicted RBP17.2■□□□□ 0.34
VARS-219ENST00000461328 CYP26B1Q9NR63 512 aa17.2■□□□□ 0.34
VARS-219ENST00000461328 BMP2KQ9NSY1 1161 aaPredicted RBP17.2■□□□□ 0.34
VARS-219ENST00000461328 WRAP73Q9P2S5 460 aaPredicted RBP17.2■□□□□ 0.34
VARS-219ENST00000461328 MRPL42Q9Y6G3 142 aaKnown RBP17.2■□□□□ 0.34
VARS-219ENST00000461328 C9IYK1 514 aa17.19■□□□□ 0.34
VARS-219ENST00000461328 C5orf67F2Z3F1 127 aa17.19■□□□□ 0.34
VARS-219ENST00000461328 MAFO75444 373 aaPredicted RBP17.19■□□□□ 0.34
VARS-219ENST00000461328 DARSP14868 501 aaKnown RBP17.19■□□□□ 0.34
VARS-219ENST00000461328 ZSCAN20P17040 1043 aaPredicted RBP17.19■□□□□ 0.34
VARS-219ENST00000461328 U2AF2P26368 475 aaKnown RBP eCLIP17.19■□□□□ 0.34
VARS-219ENST00000461328 GATMP50440 423 aa17.19■□□□□ 0.34
VARS-219ENST00000461328 NPEPPSP55786 919 aa17.19■□□□□ 0.34
VARS-219ENST00000461328 CDC42EP1Q00587 391 aa17.19■□□□□ 0.34
VARS-219ENST00000461328 NBR1Q14596 966 aa17.19■□□□□ 0.34
VARS-219ENST00000461328 TIGD5Q53EQ6 642 aa17.19■□□□□ 0.34
VARS-219ENST00000461328 CEP89Q96ST8 783 aa17.19■□□□□ 0.34
VARS-219ENST00000461328 GCOM2Q9BZD3 368 aaPredicted RBP17.19■□□□□ 0.34
VARS-219ENST00000461328 SUCLA2Q9P2R7 463 aaPredicted RBP17.19■□□□□ 0.34
VARS-219ENST00000461328 CUL9Q8IWT3 2517 aa17.18■□□□□ 0.34
VARS-219ENST00000461328 IGKV6-21A0A0C4DH24 114 aa17.18■□□□□ 0.34
VARS-219ENST00000461328 RFC5P40937 340 aa17.18■□□□□ 0.34
VARS-219ENST00000461328 TECP42680 631 aa17.18■□□□□ 0.34
VARS-219ENST00000461328 DSC3Q14574 896 aa17.18■□□□□ 0.34
VARS-219ENST00000461328 XKR9Q5GH70 373 aa17.18■□□□□ 0.34
VARS-219ENST00000461328 EXOC8Q8IYI6 725 aa17.18■□□□□ 0.34
VARS-219ENST00000461328 ERMNQ8TAM6 284 aa17.18■□□□□ 0.34
VARS-219ENST00000461328 ADAMTS19Q8TE59 1207 aa17.18■□□□□ 0.34
VARS-219ENST00000461328 PLVAPQ9BX97 442 aa17.18■□□□□ 0.34
VARS-219ENST00000461328 PPME1Q9Y570 386 aa17.18■□□□□ 0.34
VARS-219ENST00000461328 TBKBP1A7MCY6 615 aa17.17■□□□□ 0.34
VARS-219ENST00000461328 FGFR4P22455 802 aa17.17■□□□□ 0.34
VARS-219ENST00000461328 KCNQ1P51787 676 aa17.17■□□□□ 0.34
VARS-219ENST00000461328 LARP1BQ659C4 914 aaKnown RBP17.17■□□□□ 0.34
VARS-219ENST00000461328 RHPN2Q8IUC4 686 aa17.17■□□□□ 0.34
VARS-219ENST00000461328 NLRP4Q96MN2 994 aa17.17■□□□□ 0.34
VARS-219ENST00000461328 LMAN2LQ9H0V9 348 aa17.17■□□□□ 0.34
VARS-219ENST00000461328 ATP6V0A4Q9HBG4 840 aa17.17■□□□□ 0.34
VARS-219ENST00000461328 TMEM161AQ9NX61 479 aa17.17■□□□□ 0.34
VARS-219ENST00000461328 A0A087WZ62 844 aa17.16■□□□□ 0.34
VARS-219ENST00000461328 GRM6O15303 877 aa17.16■□□□□ 0.34
VARS-219ENST00000461328 SLITRK3O94933 977 aa17.16■□□□□ 0.34
VARS-219ENST00000461328 CSPG5O95196 566 aa17.16■□□□□ 0.34
VARS-219ENST00000461328 EMC2Q15006 297 aa17.16■□□□□ 0.34
VARS-219ENST00000461328 SPOUT1Q5T280 376 aaKnown RBP17.16■□□□□ 0.34
VARS-219ENST00000461328 FAM102BQ5T8I3 360 aa17.16■□□□□ 0.34
VARS-219ENST00000461328 ZNF410Q86VK4 478 aa17.16■□□□□ 0.34
VARS-219ENST00000461328 FDXACB1Q9BRP7 624 aaPredicted RBP17.16■□□□□ 0.34
VARS-219ENST00000461328 NSUN3Q9H649 340 aaKnown RBP17.16■□□□□ 0.34
VARS-219ENST00000461328 ELAC1Q9H777 363 aaKnown RBP17.16■□□□□ 0.34
VARS-219ENST00000461328 PCDHB6Q9Y5E3 794 aa17.16■□□□□ 0.34
VARS-219ENST00000461328 ZBTB39O15060 712 aa17.15■□□□□ 0.34
VARS-219ENST00000461328 GAS2O43903 313 aaKnown RBP17.15■□□□□ 0.34
VARS-219ENST00000461328 CSDE1O75534 798 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms