RNA–Protein interactions for RNA: ENST00000461154.1

SHANK1-205, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 4

Gene SHANK1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-205ENST00000461154 ZDHHC9Q9Y397 364 aa18.09■□□□□ 0.49
SHANK1-205ENST00000461154 PCDHA11Q9Y5I1 949 aa18.09■□□□□ 0.49
SHANK1-205ENST00000461154 SIP14410 1827 aa18.08■□□□□ 0.48
SHANK1-205ENST00000461154 GHRP10912 638 aa18.08■□□□□ 0.48
SHANK1-205ENST00000461154 TXLNAP40222 546 aa18.08■□□□□ 0.48
SHANK1-205ENST00000461154 PBX2P40425 430 aa18.08■□□□□ 0.48
SHANK1-205ENST00000461154 WDR5P61964 334 aaKnown RBP18.08■□□□□ 0.48
SHANK1-205ENST00000461154 ECM1Q16610 540 aa18.08■□□□□ 0.48
SHANK1-205ENST00000461154 FBXO47Q5MNV8 452 aa18.08■□□□□ 0.48
SHANK1-205ENST00000461154 ODR4Q5SWX8 454 aa18.08■□□□□ 0.48
SHANK1-205ENST00000461154 TSHZ1Q6ZSZ6 1077 aa18.08■□□□□ 0.48
SHANK1-205ENST00000461154 KCNG4Q8TDN1 519 aa18.08■□□□□ 0.48
SHANK1-205ENST00000461154 SCLT1Q96NL6 688 aa18.08■□□□□ 0.48
SHANK1-205ENST00000461154 CSRNP2Q9H175 543 aa18.08■□□□□ 0.48
SHANK1-205ENST00000461154 SUCLA2Q9P2R7 463 aaPredicted RBP18.08■□□□□ 0.48
SHANK1-205ENST00000461154 GINS2Q9Y248 185 aa18.08■□□□□ 0.48
SHANK1-205ENST00000461154 TET1Q8NFU7 2136 aa18.07■□□□□ 0.48
SHANK1-205ENST00000461154 A0A087WWV3 80 aa18.07■□□□□ 0.48
SHANK1-205ENST00000461154 EYA4O95677 639 aa18.07■□□□□ 0.48
SHANK1-205ENST00000461154 CRYBB1P53674 252 aaPredicted RBP18.07■□□□□ 0.48
SHANK1-205ENST00000461154 NLRP11P59045 1033 aaKnown RBP18.07■□□□□ 0.48
SHANK1-205ENST00000461154 KRT85P78386 507 aa18.07■□□□□ 0.48
SHANK1-205ENST00000461154 DNM1Q05193 864 aaKnown RBP18.07■□□□□ 0.48
SHANK1-205ENST00000461154 GRIN1Q05586 938 aa18.07■□□□□ 0.48
SHANK1-205ENST00000461154 KIZQ2M2Z5 673 aa18.07■□□□□ 0.48
SHANK1-205ENST00000461154 PADI6Q6TGC4 694 aa18.07■□□□□ 0.48
SHANK1-205ENST00000461154 FAM43BQ6ZT52 329 aaPredicted RBP18.07■□□□□ 0.48
SHANK1-205ENST00000461154 HERC6Q8IVU3 1022 aa18.07■□□□□ 0.48
SHANK1-205ENST00000461154 MCPH1Q8NEM0 835 aa18.07■□□□□ 0.48
SHANK1-205ENST00000461154 PSPC1Q8WXF1 523 aaKnown RBP18.07■□□□□ 0.48
SHANK1-205ENST00000461154 FAM161BQ96MY7 647 aa18.07■□□□□ 0.48
SHANK1-205ENST00000461154 IFIH1Q9BYX4 1025 aaKnown RBP18.07■□□□□ 0.48
SHANK1-205ENST00000461154 CCSER1Q9C0I3 900 aa18.07■□□□□ 0.48
SHANK1-205ENST00000461154 BHMT2Q9H2M3 363 aa18.07■□□□□ 0.48
SHANK1-205ENST00000461154 BMP2KQ9NSY1 1161 aaPredicted RBP18.07■□□□□ 0.48
SHANK1-205ENST00000461154 ASAP2O43150 1006 aa18.06■□□□□ 0.48
SHANK1-205ENST00000461154 USO1O60763 962 aaKnown RBP18.06■□□□□ 0.48
SHANK1-205ENST00000461154 GPR32O75388 356 aa18.06■□□□□ 0.48
SHANK1-205ENST00000461154 DDIT3P35638 169 aa18.06■□□□□ 0.48
SHANK1-205ENST00000461154 GPC3P51654 580 aa18.06■□□□□ 0.48
SHANK1-205ENST00000461154 RABGGTBP53611 331 aa18.06■□□□□ 0.48
SHANK1-205ENST00000461154 PAK2Q13177 524 aa18.06■□□□□ 0.48
SHANK1-205ENST00000461154 GRB10Q13322 594 aa18.06■□□□□ 0.48
SHANK1-205ENST00000461154 MKRN4PQ13434 485 aaPredicted RBP18.06■□□□□ 0.48
SHANK1-205ENST00000461154 DRP2Q13474 957 aa18.06■□□□□ 0.48
SHANK1-205ENST00000461154 LPIN1Q14693 890 aa18.06■□□□□ 0.48
SHANK1-205ENST00000461154 TCTN1Q2MV58 587 aa18.06■□□□□ 0.48
SHANK1-205ENST00000461154 ZNF410Q86VK4 478 aa18.06■□□□□ 0.48
SHANK1-205ENST00000461154 RHPN2Q8IUC4 686 aa18.06■□□□□ 0.48
SHANK1-205ENST00000461154 NLRP7Q8WX94 980 aa18.06■□□□□ 0.48
SHANK1-205ENST00000461154 TMEM143Q96AN5 459 aa18.06■□□□□ 0.48
SHANK1-205ENST00000461154 CLIC6Q96NY7 704 aa18.06■□□□□ 0.48
SHANK1-205ENST00000461154 PPP1R16BQ96T49 567 aa18.06■□□□□ 0.48
SHANK1-205ENST00000461154 OSMRQ99650 979 aa18.06■□□□□ 0.48
SHANK1-205ENST00000461154 TTYH1Q9H313 450 aaPredicted RBP18.06■□□□□ 0.48
SHANK1-205ENST00000461154 ZNF576Q9H609 170 aa18.06■□□□□ 0.48
SHANK1-205ENST00000461154 SLC28A3Q9HAS3 691 aa18.06■□□□□ 0.48
SHANK1-205ENST00000461154 CCDC39Q9UFE4 941 aa18.06■□□□□ 0.48
SHANK1-205ENST00000461154 COL4A3BPQ9Y5P4 624 aa18.06■□□□□ 0.48
SHANK1-205ENST00000461154 E9PMD0 336 aa18.05■□□□□ 0.48
SHANK1-205ENST00000461154 CUTAO60888 179 aa18.05■□□□□ 0.48
SHANK1-205ENST00000461154 AMHP03971 560 aa18.05■□□□□ 0.48
SHANK1-205ENST00000461154 NCLP19338 710 aaKnown RBP18.05■□□□□ 0.48
SHANK1-205ENST00000461154 MXD4Q14582 209 aaPredicted RBP18.05■□□□□ 0.48
SHANK1-205ENST00000461154 TMEM119Q4V9L6 283 aa18.05■□□□□ 0.48
SHANK1-205ENST00000461154 PNMA5Q96PV4 448 aa18.05■□□□□ 0.48
SHANK1-205ENST00000461154 ZBED2Q9BTP6 218 aa18.05■□□□□ 0.48
SHANK1-205ENST00000461154 GCOM2Q9BZD3 368 aaPredicted RBP18.05■□□□□ 0.48
SHANK1-205ENST00000461154 OSBPL7Q9BZF2 842 aa18.05■□□□□ 0.48
SHANK1-205ENST00000461154 NKX2-4Q9H2Z4 354 aa18.05■□□□□ 0.48
SHANK1-205ENST00000461154 ADAMTS10Q9H324 1103 aa18.05■□□□□ 0.48
SHANK1-205ENST00000461154 XPNPEP1Q9NQW7 623 aa18.05■□□□□ 0.48
SHANK1-205ENST00000461154 CIZ1Q9ULV3 898 aaPredicted RBP18.05■□□□□ 0.48
SHANK1-205ENST00000461154 GPR182O15218 404 aa18.04■□□□□ 0.48
SHANK1-205ENST00000461154 RPS6KA5O75582 802 aa18.04■□□□□ 0.48
SHANK1-205ENST00000461154 CYP11B2P19099 503 aa18.04■□□□□ 0.48
SHANK1-205ENST00000461154 EIF4BP23588 611 aaKnown RBP18.04■□□□□ 0.48
SHANK1-205ENST00000461154 ME1P48163 572 aa18.04■□□□□ 0.48
SHANK1-205ENST00000461154 DEFB103AP81534 67 aa18.04■□□□□ 0.48
SHANK1-205ENST00000461154 TFDP1Q14186 410 aa18.04■□□□□ 0.48
SHANK1-205ENST00000461154 PRPF31Q8WWY3 499 aaKnown RBP18.04■□□□□ 0.48
SHANK1-205ENST00000461154 SYMPKQ92797 1274 aaKnown RBP18.04■□□□□ 0.48
SHANK1-205ENST00000461154 EPSTI1Q96J88 318 aa18.04■□□□□ 0.48
SHANK1-205ENST00000461154 PLIN2Q99541 437 aa18.04■□□□□ 0.48
SHANK1-205ENST00000461154 FTHL17Q9BXU8 183 aa18.04■□□□□ 0.48
SHANK1-205ENST00000461154 INO80BQ9C086 356 aaPredicted RBP18.04■□□□□ 0.48
SHANK1-205ENST00000461154 RCOR1Q9UKL0 485 aa18.04■□□□□ 0.48
SHANK1-205ENST00000461154 YBX2Q9Y2T7 364 aaKnown RBP18.04■□□□□ 0.48
SHANK1-205ENST00000461154 TLL1O43897 1013 aa18.03■□□□□ 0.48
SHANK1-205ENST00000461154 CD52P31358 61 aa18.03■□□□□ 0.48
SHANK1-205ENST00000461154 ARL2P36404 184 aa18.03■□□□□ 0.48
SHANK1-205ENST00000461154 LAMTOR4Q0VGL1 99 aa18.03■□□□□ 0.48
SHANK1-205ENST00000461154 KARSQ15046 597 aaKnown RBP18.03■□□□□ 0.48
SHANK1-205ENST00000461154 SPECC1Q5M775 1068 aa18.03■□□□□ 0.48
SHANK1-205ENST00000461154 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.03■□□□□ 0.48
SHANK1-205ENST00000461154 NLRP4Q96MN2 994 aa18.03■□□□□ 0.48
SHANK1-205ENST00000461154 GUCD1Q96NT3 240 aa18.03■□□□□ 0.48
SHANK1-205ENST00000461154 SCAND2PQ9GZW5 306 aaPredicted RBP18.03■□□□□ 0.48
SHANK1-205ENST00000461154 AGO3Q9H9G7 860 aaKnown RBP18.03■□□□□ 0.48
SHANK1-205ENST00000461154 CDHR5Q9HBB8 845 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms