RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 TXKP42681 527 aa14.06□□□□□ -0.16
HDAC4-207ENST00000461113 FERMT3Q86UX7 667 aa14.06□□□□□ -0.16
HDAC4-207ENST00000461113 ETNPPLQ8TBG4 499 aa14.06□□□□□ -0.16
HDAC4-207ENST00000461113 RPGRIP1Q96KN7 1286 aa14.06□□□□□ -0.16
HDAC4-207ENST00000461113 BCAS3Q9H6U6 928 aa14.06□□□□□ -0.16
HDAC4-207ENST00000461113 KCNMB3Q9NPA1 279 aa14.06□□□□□ -0.16
HDAC4-207ENST00000461113 ZNF302Q9NR11 478 aa14.06□□□□□ -0.16
HDAC4-207ENST00000461113 CLEC1BQ9P126 229 aa14.06□□□□□ -0.16
HDAC4-207ENST00000461113 DMDP11532 3685 aa14.06□□□□□ -0.16
HDAC4-207ENST00000461113 DCHS1Q96JQ0 3298 aa14.05□□□□□ -0.16
HDAC4-207ENST00000461113 EDIL3O43854 480 aa14.05□□□□□ -0.16
HDAC4-207ENST00000461113 PSMD10O75832 226 aa14.05□□□□□ -0.16
HDAC4-207ENST00000461113 NUBP1P53384 320 aa14.05□□□□□ -0.16
HDAC4-207ENST00000461113 HIC1Q14526 733 aa14.05□□□□□ -0.16
HDAC4-207ENST00000461113 SWSAP1Q6NVH7 229 aa14.05□□□□□ -0.16
HDAC4-207ENST00000461113 PDXDC2PQ6P474 469 aa14.05□□□□□ -0.16
HDAC4-207ENST00000461113 PLPPR4Q7Z2D5 763 aa14.05□□□□□ -0.16
HDAC4-207ENST00000461113 ADSSL1Q8N142 457 aa14.05□□□□□ -0.16
HDAC4-207ENST00000461113 ERMNQ8TAM6 284 aa14.05□□□□□ -0.16
HDAC4-207ENST00000461113 SEPT8Q92599 483 aa14.05□□□□□ -0.16
HDAC4-207ENST00000461113 ATP6V0A1Q93050 837 aa14.05□□□□□ -0.16
HDAC4-207ENST00000461113 UNC45AQ9H3U1 944 aa14.05□□□□□ -0.16
HDAC4-207ENST00000461113 TTC12Q9H892 705 aaPredicted RBP14.05□□□□□ -0.16
HDAC4-207ENST00000461113 MTMR6Q9Y217 621 aa14.05□□□□□ -0.16
HDAC4-207ENST00000461113 STK24Q9Y6E0 443 aa14.05□□□□□ -0.16
HDAC4-207ENST00000461113 TRIP12Q14669 1992 aaPredicted RBP14.04□□□□□ -0.16
HDAC4-207ENST00000461113 MED19A0JLT2 244 aaPredicted RBP14.04□□□□□ -0.16
HDAC4-207ENST00000461113 ATG7O95352 703 aa14.04□□□□□ -0.16
HDAC4-207ENST00000461113 CCNE2O96020 404 aa14.04□□□□□ -0.16
HDAC4-207ENST00000461113 PPP2R5CQ13362 524 aa14.04□□□□□ -0.16
HDAC4-207ENST00000461113 NCAPH2Q6IBW4 605 aa14.04□□□□□ -0.16
HDAC4-207ENST00000461113 ABHD15Q6UXT9 468 aa14.04□□□□□ -0.16
HDAC4-207ENST00000461113 SMRP1Q8NCR6 262 aa14.04□□□□□ -0.16
HDAC4-207ENST00000461113 FAM167AQ96KS9 214 aa14.04□□□□□ -0.16
HDAC4-207ENST00000461113 ZNF396Q96N95 335 aaPredicted RBP14.04□□□□□ -0.16
HDAC4-207ENST00000461113 C16orf70Q9BSU1 422 aa14.04□□□□□ -0.16
HDAC4-207ENST00000461113 PHF7Q9BWX1 381 aaPredicted RBP14.04□□□□□ -0.16
HDAC4-207ENST00000461113 OSBPL7Q9BZF2 842 aa14.04□□□□□ -0.16
HDAC4-207ENST00000461113 NRBP2Q9NSY0 501 aa14.04□□□□□ -0.16
HDAC4-207ENST00000461113 GABBR1Q9UBS5 961 aa14.04□□□□□ -0.16
HDAC4-207ENST00000461113 USP15Q9Y4E8 981 aaPredicted RBP14.04□□□□□ -0.16
HDAC4-207ENST00000461113 KMT2EQ8IZD2 1858 aa14.04□□□□□ -0.16
HDAC4-207ENST00000461113 C17orf102A2RUQ5 167 aa14.03□□□□□ -0.16
HDAC4-207ENST00000461113 RRN3P2A6NIE6 340 aa14.03□□□□□ -0.16
HDAC4-207ENST00000461113 HAS3O00219 553 aa14.03□□□□□ -0.16
HDAC4-207ENST00000461113 LINC00271P0C7V0 271 aa14.03□□□□□ -0.16
HDAC4-207ENST00000461113 ZSCAN22P10073 491 aaPredicted RBP14.03□□□□□ -0.16
HDAC4-207ENST00000461113 MARK3P27448 753 aa14.03□□□□□ -0.16
HDAC4-207ENST00000461113 COASYQ13057 564 aa14.03□□□□□ -0.16
HDAC4-207ENST00000461113 PTGDRQ13258 359 aa14.03□□□□□ -0.16
HDAC4-207ENST00000461113 EPHA7Q15375 998 aa14.03□□□□□ -0.16
HDAC4-207ENST00000461113 DTHD1Q6ZMT9 781 aa14.03□□□□□ -0.16
HDAC4-207ENST00000461113 FRMD5Q7Z6J6 570 aa14.03□□□□□ -0.16
HDAC4-207ENST00000461113 HAS1Q92839 578 aa14.03□□□□□ -0.16
HDAC4-207ENST00000461113 NKD2Q969F2 451 aaPredicted RBP14.03□□□□□ -0.16
HDAC4-207ENST00000461113 GJA10Q969M2 543 aa14.03□□□□□ -0.16
HDAC4-207ENST00000461113 PCDHB6Q9Y5E3 794 aa14.03□□□□□ -0.16
HDAC4-207ENST00000461113 ATP6V1DQ9Y5K8 247 aa14.03□□□□□ -0.16
HDAC4-207ENST00000461113 KIAA1217Q5T5P2 1943 aa14.03□□□□□ -0.16
HDAC4-207ENST00000461113 RIF1Q5UIP0 2472 aaKnown RBP14.03□□□□□ -0.16
HDAC4-207ENST00000461113 PLXNA3P51805 1871 aa14.02□□□□□ -0.16
HDAC4-207ENST00000461113 NRCAMQ92823 1304 aa14.02□□□□□ -0.17
HDAC4-207ENST00000461113 HBP1O60381 514 aa14.02□□□□□ -0.17
HDAC4-207ENST00000461113 P4HBP07237 508 aaKnown RBP14.02□□□□□ -0.17
HDAC4-207ENST00000461113 SMIM10L2AP0DMW4 78 aa14.02□□□□□ -0.17
HDAC4-207ENST00000461113 SMIM10L2BP0DMW5 78 aa14.02□□□□□ -0.17
HDAC4-207ENST00000461113 TECP42680 631 aa14.02□□□□□ -0.17
HDAC4-207ENST00000461113 TOB1P50616 345 aaPredicted RBP14.02□□□□□ -0.17
HDAC4-207ENST00000461113 PSMC5P62195 406 aa14.02□□□□□ -0.17
HDAC4-207ENST00000461113 RESTQ13127 1097 aa14.02□□□□□ -0.17
HDAC4-207ENST00000461113 PPFIA1Q13136 1202 aa14.02□□□□□ -0.17
HDAC4-207ENST00000461113 CAMK1Q14012 370 aa14.02□□□□□ -0.17
HDAC4-207ENST00000461113 PTPN21Q16825 1174 aa14.02□□□□□ -0.17
HDAC4-207ENST00000461113 SERINC5Q86VE9 423 aa14.02□□□□□ -0.17
HDAC4-207ENST00000461113 TRIM50Q86XT4 487 aa14.02□□□□□ -0.17
HDAC4-207ENST00000461113 EFHBQ8N7U6 833 aa14.02□□□□□ -0.17
HDAC4-207ENST00000461113 RIPOR3Q96MK2 946 aa14.02□□□□□ -0.17
HDAC4-207ENST00000461113 CCDC43Q96MW1 224 aaKnown RBP14.02□□□□□ -0.17
HDAC4-207ENST00000461113 MTMR9Q96QG7 549 aa14.02□□□□□ -0.17
HDAC4-207ENST00000461113 TMEM60Q9H2L4 133 aa14.02□□□□□ -0.17
HDAC4-207ENST00000461113 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.02□□□□□ -0.17
HDAC4-207ENST00000461113 BARX2Q9UMQ3 279 aaPredicted RBP14.02□□□□□ -0.17
HDAC4-207ENST00000461113 RWDD3Q9Y3V2 267 aa14.02□□□□□ -0.17
HDAC4-207ENST00000461113 MYO7AQ13402 2215 aa14.02□□□□□ -0.17
HDAC4-207ENST00000461113 IGKV6D-21A0A0A0MT36 114 aa14.01□□□□□ -0.17
HDAC4-207ENST00000461113 PRPHP41219 470 aa14.01□□□□□ -0.17
HDAC4-207ENST00000461113 QARSP47897 775 aaKnown RBP14.01□□□□□ -0.17
HDAC4-207ENST00000461113 NBR1Q14596 966 aa14.01□□□□□ -0.17
HDAC4-207ENST00000461113 FOXD4L5Q5VV16 416 aaPredicted RBP14.01□□□□□ -0.17
HDAC4-207ENST00000461113 ARL6IP4Q66PJ3 421 aaKnown RBP14.01□□□□□ -0.17
HDAC4-207ENST00000461113 HAUS3Q68CZ6 603 aa14.01□□□□□ -0.17
HDAC4-207ENST00000461113 ADGRD2Q7Z7M1 963 aa14.01□□□□□ -0.17
HDAC4-207ENST00000461113 CCDC60Q8IWA6 550 aaPredicted RBP14.01□□□□□ -0.17
HDAC4-207ENST00000461113 ATP8B4Q8TF62 1192 aa14.01□□□□□ -0.17
HDAC4-207ENST00000461113 FOXD4L4Q8WXT5 416 aaPredicted RBP14.01□□□□□ -0.17
HDAC4-207ENST00000461113 BBXQ8WY36 941 aaPredicted RBP14.01□□□□□ -0.17
HDAC4-207ENST00000461113 PPP2R3CQ969Q6 453 aa14.01□□□□□ -0.17
HDAC4-207ENST00000461113 VAV3Q9UKW4 847 aa14.01□□□□□ -0.17
HDAC4-207ENST00000461113 MAFBQ9Y5Q3 323 aaPredicted RBP14.01□□□□□ -0.17
HDAC4-207ENST00000461113 F13A1P00488 732 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms