RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 TCP11Q8WWU5 503 aa12.33□□□□□ -0.44
APTX-209ENST00000460940 CDK5RAP3Q96JB5 506 aa12.33□□□□□ -0.44
APTX-209ENST00000460940 MMTAG2Q9BU76 263 aaKnown RBP12.33□□□□□ -0.44
APTX-209ENST00000460940 CELF4Q9BZC1 486 aaKnown RBP12.33□□□□□ -0.44
APTX-209ENST00000460940 SUGCTQ9HAC7 445 aa12.33□□□□□ -0.44
APTX-209ENST00000460940 ATP6V0A4Q9HBG4 840 aa12.33□□□□□ -0.44
APTX-209ENST00000460940 CCDC39Q9UFE4 941 aa12.33□□□□□ -0.44
APTX-209ENST00000460940 KIAA1024Q9UPX6 916 aa12.33□□□□□ -0.44
APTX-209ENST00000460940 AKT3Q9Y243 479 aa12.33□□□□□ -0.44
APTX-209ENST00000460940 ZDHHC9Q9Y397 364 aa12.33□□□□□ -0.44
APTX-209ENST00000460940 RANBP2P49792 3224 aaKnown RBP12.33□□□□□ -0.44
APTX-209ENST00000460940 ARID2Q68CP9 1835 aa12.32□□□□□ -0.44
APTX-209ENST00000460940 ARHGEF35A5YM69 484 aa12.32□□□□□ -0.44
APTX-209ENST00000460940 SPTLC2O15270 562 aa12.32□□□□□ -0.44
APTX-209ENST00000460940 EFCAB14O75071 495 aa12.32□□□□□ -0.44
APTX-209ENST00000460940 BAIAP3O94812 1187 aa12.32□□□□□ -0.44
APTX-209ENST00000460940 FGBP02675 491 aa12.32□□□□□ -0.44
APTX-209ENST00000460940 MARCKSP29966 332 aaPredicted RBP12.32□□□□□ -0.44
APTX-209ENST00000460940 GTF2F1P35269 517 aaKnown RBP eCLIP12.32□□□□□ -0.44
APTX-209ENST00000460940 TXLNAP40222 546 aa12.32□□□□□ -0.44
APTX-209ENST00000460940 GPNMBQ14956 572 aa12.32□□□□□ -0.44
APTX-209ENST00000460940 CNKSR3Q6P9H4 555 aa12.32□□□□□ -0.44
APTX-209ENST00000460940 C16orf59Q7L2K0 433 aa12.32□□□□□ -0.44
APTX-209ENST00000460940 CABP7Q86V35 215 aa12.32□□□□□ -0.44
APTX-209ENST00000460940 HERVK_113Q902F9 699 aa12.32□□□□□ -0.44
APTX-209ENST00000460940 APBB2Q92870 758 aa12.32□□□□□ -0.44
APTX-209ENST00000460940 VWCEQ96DN2 955 aa12.32□□□□□ -0.44
APTX-209ENST00000460940 CALML4Q96GE6 196 aa12.32□□□□□ -0.44
APTX-209ENST00000460940 MTRQ99707 1265 aa12.32□□□□□ -0.44
APTX-209ENST00000460940 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.32□□□□□ -0.443e-6■■□□□ 12.8
APTX-209ENST00000460940 SH2D3AQ9BRG2 576 aa12.32□□□□□ -0.44
APTX-209ENST00000460940 DDX19AQ9NUU7 478 aaKnown RBP12.32□□□□□ -0.44
APTX-209ENST00000460940 DNM3Q9UQ16 869 aa12.32□□□□□ -0.44
APTX-209ENST00000460940 ZBTB39O15060 712 aa12.31□□□□□ -0.44
APTX-209ENST00000460940 EYA4O95677 639 aa12.31□□□□□ -0.44
APTX-209ENST00000460940 ACRP10323 421 aa12.31□□□□□ -0.44
APTX-209ENST00000460940 CDC25AP30304 524 aa12.31□□□□□ -0.44
APTX-209ENST00000460940 CRYBB1P53674 252 aaPredicted RBP12.31□□□□□ -0.44
APTX-209ENST00000460940 ECM1Q16610 540 aa12.31□□□□□ -0.44
APTX-209ENST00000460940 TMEM119Q4V9L6 283 aa12.31□□□□□ -0.44
APTX-209ENST00000460940 PLEKHG4Q58EX7 1191 aa12.31□□□□□ -0.44
APTX-209ENST00000460940 FBXO47Q5MNV8 452 aa12.31□□□□□ -0.44
APTX-209ENST00000460940 TSHZ1Q6ZSZ6 1077 aa12.31□□□□□ -0.44
APTX-209ENST00000460940 ZNF365Q70YC5 407 aa12.31□□□□□ -0.44
APTX-209ENST00000460940 ZNF410Q86VK4 478 aa12.31□□□□□ -0.44
APTX-209ENST00000460940 ZNF579Q8NAF0 562 aaKnown RBP12.31□□□□□ -0.44
APTX-209ENST00000460940 MCPH1Q8NEM0 835 aa12.31□□□□□ -0.44
APTX-209ENST00000460940 PSPC1Q8WXF1 523 aaKnown RBP12.31□□□□□ -0.44
APTX-209ENST00000460940 SEPT8Q92599 483 aa12.31□□□□□ -0.44
APTX-209ENST00000460940 RNPC3Q96LT9 517 aaKnown RBP12.31□□□□□ -0.44
APTX-209ENST00000460940 PRIMPOLQ96LW4 560 aa12.31□□□□□ -0.44
APTX-209ENST00000460940 CCSER1Q9C0I3 900 aa12.31□□□□□ -0.44
APTX-209ENST00000460940 CSRNP2Q9H175 543 aa12.31□□□□□ -0.44
APTX-209ENST00000460940 SUCLA2Q9P2R7 463 aaPredicted RBP12.31□□□□□ -0.44
APTX-209ENST00000460940 LOXHD1Q8IVV2 1947 aa12.31□□□□□ -0.44
APTX-209ENST00000460940 VTNP04004 478 aa12.31□□□□□ -0.44
APTX-209ENST00000460940 GPC3P51654 580 aa12.31□□□□□ -0.44
APTX-209ENST00000460940 KRT85P78386 507 aa12.31□□□□□ -0.44
APTX-209ENST00000460940 DNM1Q05193 864 aaKnown RBP12.31□□□□□ -0.44
APTX-209ENST00000460940 GRIN1Q05586 938 aa12.31□□□□□ -0.44
APTX-209ENST00000460940 TMEM62Q0P6H9 643 aa12.31□□□□□ -0.44
APTX-209ENST00000460940 MKRN4PQ13434 485 aaPredicted RBP12.31□□□□□ -0.44
APTX-209ENST00000460940 LPIN1Q14693 890 aa12.31□□□□□ -0.44
APTX-209ENST00000460940 ODR4Q5SWX8 454 aa12.31□□□□□ -0.44
APTX-209ENST00000460940 C9orf50Q5SZB4 431 aa12.31□□□□□ -0.44
APTX-209ENST00000460940 RASIP1Q5U651 963 aa12.31□□□□□ -0.44
APTX-209ENST00000460940 RASSF8Q8NHQ8 419 aa12.31□□□□□ -0.44
APTX-209ENST00000460940 IFIH1Q9BYX4 1025 aaKnown RBP12.31□□□□□ -0.44
APTX-209ENST00000460940 TFIP11Q9UBB9 837 aaKnown RBP12.31□□□□□ -0.44
APTX-209ENST00000460940 USO1O60763 962 aaKnown RBP12.3□□□□□ -0.44
APTX-209ENST00000460940 GPR32O75388 356 aa12.3□□□□□ -0.44
APTX-209ENST00000460940 GHRP10912 638 aa12.3□□□□□ -0.44
APTX-209ENST00000460940 GRB10Q13322 594 aa12.3□□□□□ -0.44
APTX-209ENST00000460940 DRP2Q13474 957 aa12.3□□□□□ -0.44
APTX-209ENST00000460940 MXD4Q14582 209 aaPredicted RBP12.3□□□□□ -0.44
APTX-209ENST00000460940 SHHQ15465 462 aa12.3□□□□□ -0.44
APTX-209ENST00000460940 KIZQ2M2Z5 673 aa12.3□□□□□ -0.44
APTX-209ENST00000460940 FOXD4L6Q3SYB3 417 aaPredicted RBP12.3□□□□□ -0.44
APTX-209ENST00000460940 PADI6Q6TGC4 694 aa12.3□□□□□ -0.44
APTX-209ENST00000460940 FOXD4L3Q6VB84 417 aaPredicted RBP12.3□□□□□ -0.44
APTX-209ENST00000460940 PNMA5Q96PV4 448 aa12.3□□□□□ -0.44
APTX-209ENST00000460940 BHMT2Q9H2M3 363 aa12.3□□□□□ -0.44
APTX-209ENST00000460940 ADAMTS10Q9H324 1103 aa12.3□□□□□ -0.44
APTX-209ENST00000460940 XPNPEP1Q9NQW7 623 aa12.3□□□□□ -0.44
APTX-209ENST00000460940 COL4A3BPQ9Y5P4 624 aa12.3□□□□□ -0.44
APTX-209ENST00000460940 SCN5AQ14524 2016 aa12.3□□□□□ -0.44
APTX-209ENST00000460940 SIP14410 1827 aa12.29□□□□□ -0.44
APTX-209ENST00000460940 ABHD14A-ACY1A0A1B0GW23 586 aa12.29□□□□□ -0.44
APTX-209ENST00000460940 ASAP2O43150 1006 aa12.29□□□□□ -0.44
APTX-209ENST00000460940 CUTAO60888 179 aa12.29□□□□□ -0.44
APTX-209ENST00000460940 CYP11B2P19099 503 aa12.29□□□□□ -0.44
APTX-209ENST00000460940 NLRP11P59045 1033 aaKnown RBP12.29□□□□□ -0.44
APTX-209ENST00000460940 PAK2Q13177 524 aa12.29□□□□□ -0.44
APTX-209ENST00000460940 IKBKEQ14164 716 aa12.29□□□□□ -0.44
APTX-209ENST00000460940 ZRSR1Q15695 479 aaKnown RBP12.29□□□□□ -0.44
APTX-209ENST00000460940 OTOP2Q7RTS6 562 aa12.29□□□□□ -0.44
APTX-209ENST00000460940 NLRP7Q8WX94 980 aa12.29□□□□□ -0.44
APTX-209ENST00000460940 SYMPKQ92797 1274 aaKnown RBP12.29□□□□□ -0.44
APTX-209ENST00000460940 SCLT1Q96NL6 688 aa12.29□□□□□ -0.44
APTX-209ENST00000460940 KCND2Q9NZV8 630 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms