RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 GALNTL6Q49A17 601 aa16.78■□□□□ 0.28
SSR4-206ENST00000460616 DUPD1Q68J44 220 aa16.78■□□□□ 0.28
SSR4-206ENST00000460616 ERICH1Q86X53 443 aa16.78■□□□□ 0.28
SSR4-206ENST00000460616 HES6Q96HZ4 224 aa16.78■□□□□ 0.28
SSR4-206ENST00000460616 C6orf50Q9HD87 102 aa16.78■□□□□ 0.28
SSR4-206ENST00000460616 STK38LQ9Y2H1 464 aa16.78■□□□□ 0.28
SSR4-206ENST00000460616 DAAM1Q9Y4D1 1078 aa16.78■□□□□ 0.28
SSR4-206ENST00000460616 USP15Q9Y4E8 981 aaPredicted RBP16.78■□□□□ 0.28
SSR4-206ENST00000460616 KRT16P08779 473 aa16.77■□□□□ 0.28
SSR4-206ENST00000460616 SLC4A8Q2Y0W8 1093 aa16.77■□□□□ 0.28
SSR4-206ENST00000460616 GBP7Q8N8V2 638 aaPredicted RBP16.77■□□□□ 0.28
SSR4-206ENST00000460616 SPDYE1Q8NFV5 336 aaPredicted RBP16.77■□□□□ 0.28
SSR4-206ENST00000460616 ATP8A2Q9NTI2 1148 aa16.77■□□□□ 0.28
SSR4-206ENST00000460616 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.77■□□□□ 0.28
SSR4-206ENST00000460616 ZNF804BA4D1E1 1349 aa16.77■□□□□ 0.28
SSR4-206ENST00000460616 A8MUI8 341 aa16.77■□□□□ 0.27
SSR4-206ENST00000460616 H2AFZP0C0S5 128 aa16.77■□□□□ 0.27
SSR4-206ENST00000460616 ATP2A2P16615 1042 aaKnown RBP16.77■□□□□ 0.27
SSR4-206ENST00000460616 GNA11P29992 359 aa16.77■□□□□ 0.27
SSR4-206ENST00000460616 MARSP56192 900 aaKnown RBP16.77■□□□□ 0.27
SSR4-206ENST00000460616 PTENP60484 403 aa16.77■□□□□ 0.27
SSR4-206ENST00000460616 KCNH2Q12809 1159 aa16.77■□□□□ 0.27
SSR4-206ENST00000460616 BNIP1Q12981 228 aa16.77■□□□□ 0.27
SSR4-206ENST00000460616 COASYQ13057 564 aa16.77■□□□□ 0.27
SSR4-206ENST00000460616 SEPT2Q15019 361 aa16.77■□□□□ 0.27
SSR4-206ENST00000460616 CALCRLQ16602 461 aa16.77■□□□□ 0.27
SSR4-206ENST00000460616 TMEM266Q2M3C6 531 aa16.77■□□□□ 0.27
SSR4-206ENST00000460616 ANKRD20A2Q5SQ80 823 aa16.77■□□□□ 0.27
SSR4-206ENST00000460616 ANKRD20A1Q5TYW2 823 aa16.77■□□□□ 0.27
SSR4-206ENST00000460616 ANKRD20A3Q5VUR7 823 aa16.77■□□□□ 0.27
SSR4-206ENST00000460616 H2AFVQ71UI9 128 aa16.77■□□□□ 0.27
SSR4-206ENST00000460616 KIF2BQ8N4N8 673 aa16.77■□□□□ 0.27
SSR4-206ENST00000460616 MTMR9Q96QG7 549 aa16.77■□□□□ 0.27
SSR4-206ENST00000460616 YIPF3Q9GZM5 350 aa16.77■□□□□ 0.27
SSR4-206ENST00000460616 ARPP21Q9UBL0 812 aaPredicted RBP16.77■□□□□ 0.27
SSR4-206ENST00000460616 AMFRQ9UKV5 643 aa16.77■□□□□ 0.27
SSR4-206ENST00000460616 TTC7AQ9ULT0 858 aaPredicted RBP16.77■□□□□ 0.27
SSR4-206ENST00000460616 LUC7L3O95232 432 aaKnown RBP16.76■□□□□ 0.27
SSR4-206ENST00000460616 MSH2P43246 934 aa16.76■□□□□ 0.27
SSR4-206ENST00000460616 KLRC3Q07444 240 aa16.76■□□□□ 0.27
SSR4-206ENST00000460616 KCNK18Q7Z418 384 aa16.76■□□□□ 0.27
SSR4-206ENST00000460616 NELFCDQ8IXH7 590 aa16.76■□□□□ 0.27
SSR4-206ENST00000460616 SP8Q8IXZ3 490 aa16.76■□□□□ 0.27
SSR4-206ENST00000460616 IFT74Q96LB3 600 aa16.76■□□□□ 0.27
SSR4-206ENST00000460616 MOV10L1Q9BXT6 1211 aaKnown RBP16.76■□□□□ 0.27
SSR4-206ENST00000460616 CCDC113Q9H0I3 377 aa16.76■□□□□ 0.27
SSR4-206ENST00000460616 ARHGEF3Q9NR81 526 aa16.76■□□□□ 0.27
SSR4-206ENST00000460616 TBC1D7Q9P0N9 293 aa16.76■□□□□ 0.27
SSR4-206ENST00000460616 SOCS7O14512 581 aa16.76■□□□□ 0.27
SSR4-206ENST00000460616 SUN1O94901 812 aa16.76■□□□□ 0.27
SSR4-206ENST00000460616 GOLGA8HP0CJ92 632 aa16.76■□□□□ 0.27
SSR4-206ENST00000460616 FXR2P51116 673 aaKnown RBP eCLIP16.76■□□□□ 0.27
SSR4-206ENST00000460616 ATP11AP98196 1134 aa16.76■□□□□ 0.27
SSR4-206ENST00000460616 PRPF4BQ13523 1007 aaKnown RBP16.76■□□□□ 0.27
SSR4-206ENST00000460616 CNGA2Q16280 664 aa16.76■□□□□ 0.27
SSR4-206ENST00000460616 SBK1Q52WX2 424 aa16.76■□□□□ 0.27
SSR4-206ENST00000460616 FAM26FQ5R3K3 315 aa16.76■□□□□ 0.27
SSR4-206ENST00000460616 KRT79Q5XKE5 535 aa16.76■□□□□ 0.27
SSR4-206ENST00000460616 ADAT2Q7Z6V5 191 aaKnown RBP16.76■□□□□ 0.27
SSR4-206ENST00000460616 CROCCP2Q86T23 111 aa16.76■□□□□ 0.27
SSR4-206ENST00000460616 SNX29Q8TEQ0 813 aa16.76■□□□□ 0.27
SSR4-206ENST00000460616 PARD3BQ8TEW8 1205 aa16.76■□□□□ 0.27
SSR4-206ENST00000460616 GLG1Q92896 1179 aa16.76■□□□□ 0.27
SSR4-206ENST00000460616 ZBTB10Q96DT7 871 aa16.76■□□□□ 0.27
SSR4-206ENST00000460616 NUDT12Q9BQG2 462 aa16.76■□□□□ 0.27
SSR4-206ENST00000460616 ANKRD2Q9GZV1 360 aa16.76■□□□□ 0.27
SSR4-206ENST00000460616 POLLQ9UGP5 575 aa16.76■□□□□ 0.27
SSR4-206ENST00000460616 CNOT7Q9UIV1 285 aaKnown RBP16.76■□□□□ 0.27
SSR4-206ENST00000460616 IRS2Q9Y4H2 1338 aa16.76■□□□□ 0.27
SSR4-206ENST00000460616 A0A0A6YYK5 440 aaPredicted RBP16.75■□□□□ 0.27
SSR4-206ENST00000460616 ANKRD33BA6NCL7 494 aa16.75■□□□□ 0.27
SSR4-206ENST00000460616 UFL1O94874 794 aa16.75■□□□□ 0.27
SSR4-206ENST00000460616 OAS1P00973 400 aaKnown RBP16.75■□□□□ 0.27
SSR4-206ENST00000460616 UCHL3P15374 230 aa16.75■□□□□ 0.27
SSR4-206ENST00000460616 SLC9A1P19634 815 aa16.75■□□□□ 0.27
SSR4-206ENST00000460616 LACTBP83111 547 aaPredicted RBP16.75■□□□□ 0.27
SSR4-206ENST00000460616 ADAM9Q13443 819 aa16.75■□□□□ 0.27
SSR4-206ENST00000460616 PPP2R5EQ16537 467 aa16.75■□□□□ 0.27
SSR4-206ENST00000460616 DYDC1Q8WWB3 177 aa16.75■□□□□ 0.27
SSR4-206ENST00000460616 FAM167BQ9BTA0 163 aa16.75■□□□□ 0.27
SSR4-206ENST00000460616 RAB34Q9BZG1 259 aa16.75■□□□□ 0.27
SSR4-206ENST00000460616 STMN4Q9H169 189 aaPredicted RBP16.75■□□□□ 0.27
SSR4-206ENST00000460616 BIN2Q9UBW5 565 aaPredicted RBP16.75■□□□□ 0.27
SSR4-206ENST00000460616 SNX24Q9Y343 169 aa16.75■□□□□ 0.27
SSR4-206ENST00000460616 A6NHS1 94 aa16.75■□□□□ 0.27
SSR4-206ENST00000460616 POTEMA6NI47 508 aa16.75■□□□□ 0.27
SSR4-206ENST00000460616 SLCO1A2P46721 670 aa16.75■□□□□ 0.27
SSR4-206ENST00000460616 CCNG1P51959 295 aa16.75■□□□□ 0.27
SSR4-206ENST00000460616 NPEPPSP55786 919 aa16.75■□□□□ 0.27
SSR4-206ENST00000460616 ORC2Q13416 577 aaPredicted RBP16.75■□□□□ 0.27
SSR4-206ENST00000460616 UBE4AQ14139 1066 aa16.75■□□□□ 0.27
SSR4-206ENST00000460616 CAVIN4Q5BKX8 364 aa16.75■□□□□ 0.27
SSR4-206ENST00000460616 KIAA1755Q5JYT7 1200 aa16.75■□□□□ 0.27
SSR4-206ENST00000460616 SOGA3Q5TF21 947 aa16.75■□□□□ 0.27
SSR4-206ENST00000460616 VPS36Q86VN1 386 aa16.75■□□□□ 0.27
SSR4-206ENST00000460616 UHMK1Q8TAS1 419 aaKnown RBP16.75■□□□□ 0.27
SSR4-206ENST00000460616 FBXO25Q8TCJ0 367 aa16.75■□□□□ 0.27
SSR4-206ENST00000460616 C7orf43Q8WVR3 580 aa16.75■□□□□ 0.27
SSR4-206ENST00000460616 NSUN4Q96CB9 384 aaKnown RBP16.75■□□□□ 0.27
SSR4-206ENST00000460616 DNAJC19Q96DA6 116 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms