RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 HMGB1P09429 215 aaKnown RBP6.37□□□□□ -1.39
VBP1-202ENST00000460509 COL6A1P12109 1028 aa6.37□□□□□ -1.39
VBP1-202ENST00000460509 ENPP1P22413 925 aa6.37□□□□□ -1.39
VBP1-202ENST00000460509 LGALS4P56470 323 aa6.37□□□□□ -1.39
VBP1-202ENST00000460509 ACAP2Q15057 778 aa6.37□□□□□ -1.39
VBP1-202ENST00000460509 FSCN1Q16658 493 aaKnown RBP6.37□□□□□ -1.39
VBP1-202ENST00000460509 DGKDQ16760 1214 aa6.37□□□□□ -1.39
VBP1-202ENST00000460509 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.37□□□□□ -1.39
VBP1-202ENST00000460509 TOR2AQ5JU69 321 aa6.37□□□□□ -1.39
VBP1-202ENST00000460509 KANSL1Q7Z3B3 1105 aa6.37□□□□□ -1.39
VBP1-202ENST00000460509 PNMA8AQ86V59 439 aaPredicted RBP6.37□□□□□ -1.39
VBP1-202ENST00000460509 IFNL2Q8IZJ0 200 aa6.37□□□□□ -1.39
VBP1-202ENST00000460509 LINC01356Q8N9X3 169 aa6.37□□□□□ -1.39
VBP1-202ENST00000460509 TOX2Q96NM4 488 aa6.37□□□□□ -1.39
VBP1-202ENST00000460509 KCMF1Q9P0J7 381 aa6.37□□□□□ -1.39
VBP1-202ENST00000460509 SAE1Q9UBE0 346 aaPredicted RBP6.37□□□□□ -1.39
VBP1-202ENST00000460509 Q9UFV3 132 aa6.37□□□□□ -1.39
VBP1-202ENST00000460509 SYNPO2Q9UMS6 1093 aa6.37□□□□□ -1.39
VBP1-202ENST00000460509 G3BP2Q9UN86 482 aaKnown RBP6.37□□□□□ -1.39
VBP1-202ENST00000460509 SH3D21A4FU49 640 aa6.36□□□□□ -1.39
VBP1-202ENST00000460509 XPOTO43592 962 aaKnown RBP6.36□□□□□ -1.39
VBP1-202ENST00000460509 OPHN1O60890 802 aa6.36□□□□□ -1.39
VBP1-202ENST00000460509 ALDH1L1O75891 902 aa6.36□□□□□ -1.39
VBP1-202ENST00000460509 CFBP00751 764 aa6.36□□□□□ -1.39
VBP1-202ENST00000460509 HMGCRP04035 888 aa6.36□□□□□ -1.39
VBP1-202ENST00000460509 POLD1P28340 1107 aa6.36□□□□□ -1.39
VBP1-202ENST00000460509 GPR3P46089 330 aa6.36□□□□□ -1.39
VBP1-202ENST00000460509 STAT5BP51692 787 aa6.36□□□□□ -1.39
VBP1-202ENST00000460509 RRADP55042 308 aa6.36□□□□□ -1.39
VBP1-202ENST00000460509 CCT2P78371 535 aaKnown RBP6.36□□□□□ -1.39
VBP1-202ENST00000460509 CDK17Q00537 523 aa6.36□□□□□ -1.39
VBP1-202ENST00000460509 SRSF2Q01130 221 aaKnown RBP6.36□□□□□ -1.39
VBP1-202ENST00000460509 PPARAQ07869 468 aa6.36□□□□□ -1.39
VBP1-202ENST00000460509 PITRM1Q5JRX3 1037 aa6.36□□□□□ -1.39
VBP1-202ENST00000460509 ODR4Q5SWX8 454 aa6.36□□□□□ -1.39
VBP1-202ENST00000460509 ZBTB46Q86UZ6 589 aa6.36□□□□□ -1.39
VBP1-202ENST00000460509 LRRC56Q8IYG6 542 aaPredicted RBP6.36□□□□□ -1.39
VBP1-202ENST00000460509 RTKN2Q8IZC4 609 aa6.36□□□□□ -1.39
VBP1-202ENST00000460509 TXNDC5Q8NBS9 432 aaKnown RBP6.36□□□□□ -1.39
VBP1-202ENST00000460509 OR5AN1Q8NGI8 311 aa6.36□□□□□ -1.39
VBP1-202ENST00000460509 ADAMTS17Q8TE56 1095 aa6.36□□□□□ -1.39
VBP1-202ENST00000460509 FUBP3Q96I24 572 aaKnown RBP eCLIP6.36□□□□□ -1.39
VBP1-202ENST00000460509 KCTD10Q9H3F6 313 aa6.36□□□□□ -1.39
VBP1-202ENST00000460509 BARX1Q9HBU1 254 aaPredicted RBP6.36□□□□□ -1.39
VBP1-202ENST00000460509 AASDHPPTQ9NRN7 309 aa6.36□□□□□ -1.39
VBP1-202ENST00000460509 DNAI1Q9UI46 699 aa6.36□□□□□ -1.39
VBP1-202ENST00000460509 FBXO10Q9UK96 956 aa6.36□□□□□ -1.39
VBP1-202ENST00000460509 PCDHB6Q9Y5E3 794 aa6.36□□□□□ -1.39
VBP1-202ENST00000460509 TNKSO95271 1327 aa6.35□□□□□ -1.39
VBP1-202ENST00000460509 SHTN1A0MZ66 631 aa6.35□□□□□ -1.39
VBP1-202ENST00000460509 K7ESF4 209 aa6.35□□□□□ -1.39
VBP1-202ENST00000460509 KLHL18O94889 574 aa6.35□□□□□ -1.39
VBP1-202ENST00000460509 PFKMP08237 780 aa6.35□□□□□ -1.39
VBP1-202ENST00000460509 OSMP13725 252 aa6.35□□□□□ -1.39
VBP1-202ENST00000460509 XPAP23025 273 aaPredicted RBP6.35□□□□□ -1.39
VBP1-202ENST00000460509 ANTXR2P58335 489 aa6.35□□□□□ -1.39
VBP1-202ENST00000460509 TRIM25Q14258 630 aaKnown RBP6.35□□□□□ -1.39
VBP1-202ENST00000460509 PCBP2Q15366 365 aaKnown RBP eCLIP6.35□□□□□ -1.39
VBP1-202ENST00000460509 GPR155Q7Z3F1 870 aa6.35□□□□□ -1.39
VBP1-202ENST00000460509 CBARPQ8N350 705 aaPredicted RBP6.35□□□□□ -1.39
VBP1-202ENST00000460509 CDYL2Q8N8U2 506 aa6.35□□□□□ -1.39
VBP1-202ENST00000460509 GAB3Q8WWW8 586 aa6.35□□□□□ -1.39
VBP1-202ENST00000460509 DYDC2Q96IM9 177 aa6.35□□□□□ -1.39
VBP1-202ENST00000460509 FAXDC2Q96IV6 333 aa6.35□□□□□ -1.39
VBP1-202ENST00000460509 HIST1H2AHQ96KK5 128 aa6.35□□□□□ -1.39
VBP1-202ENST00000460509 YTHDC1Q96MU7 727 aaKnown RBP6.35□□□□□ -1.39
VBP1-202ENST00000460509 HIST1H2AJQ99878 128 aa6.35□□□□□ -1.39
VBP1-202ENST00000460509 PRDM12Q9H4Q4 367 aa6.35□□□□□ -1.39
VBP1-202ENST00000460509 CCM2LQ9NUG4 571 aaPredicted RBP6.35□□□□□ -1.39
VBP1-202ENST00000460509 DPP7Q9UHL4 492 aa6.35□□□□□ -1.39
VBP1-202ENST00000460509 DENND2AQ9ULE3 1009 aa6.35□□□□□ -1.39
VBP1-202ENST00000460509 FAM184BQ9ULE4 1060 aa6.35□□□□□ -1.39
VBP1-202ENST00000460509 MRFAP1Q9Y605 127 aa6.35□□□□□ -1.39
VBP1-202ENST00000460509 NUMBLQ9Y6R0 609 aa6.35□□□□□ -1.39
VBP1-202ENST00000460509 CFPP27918 469 aa6.34□□□□□ -1.39
VBP1-202ENST00000460509 MEOX1P50221 254 aa6.34□□□□□ -1.39
VBP1-202ENST00000460509 SLURP1P55000 103 aa6.34□□□□□ -1.39
VBP1-202ENST00000460509 CAP1Q01518 475 aa6.34□□□□□ -1.39
VBP1-202ENST00000460509 TTF1Q15361 905 aaPredicted RBP6.34□□□□□ -1.39
VBP1-202ENST00000460509 Q6ZUG5 572 aa6.34□□□□□ -1.39
VBP1-202ENST00000460509 TP53I13Q8NBR0 393 aaPredicted RBP6.34□□□□□ -1.39
VBP1-202ENST00000460509 C1orf162Q8NEQ5 155 aaPredicted RBP6.34□□□□□ -1.39
VBP1-202ENST00000460509 ZSCAN18Q8TBC5 510 aaPredicted RBP6.34□□□□□ -1.39
VBP1-202ENST00000460509 JDP2Q8WYK2 163 aa6.34□□□□□ -1.39
VBP1-202ENST00000460509 RAX2Q96IS3 184 aa6.34□□□□□ -1.39
VBP1-202ENST00000460509 LCORQ96JN0 433 aaPredicted RBP6.34□□□□□ -1.39
VBP1-202ENST00000460509 SLC2A13Q96QE2 648 aa6.34□□□□□ -1.39
VBP1-202ENST00000460509 WNT8AQ9H1J5 351 aa6.34□□□□□ -1.39
VBP1-202ENST00000460509 PRSS50Q9UI38 385 aa6.34□□□□□ -1.39
VBP1-202ENST00000460509 A0A0A6YYJ9 748 aa6.33□□□□□ -1.4
VBP1-202ENST00000460509 CUTAO60888 179 aa6.33□□□□□ -1.4
VBP1-202ENST00000460509 KCNC1P48547 511 aa6.33□□□□□ -1.4
VBP1-202ENST00000460509 NEK2P51955 445 aa6.33□□□□□ -1.4
VBP1-202ENST00000460509 TOP3AQ13472 1001 aaPredicted RBP6.33□□□□□ -1.4
VBP1-202ENST00000460509 SPIDRQ14159 915 aa6.33□□□□□ -1.4
VBP1-202ENST00000460509 TMEM200BQ69YZ2 307 aa6.33□□□□□ -1.4
VBP1-202ENST00000460509 BMP8AQ7Z5Y6 402 aa6.33□□□□□ -1.4
VBP1-202ENST00000460509 ZNF761Q86XN6 746 aaPredicted RBP6.33□□□□□ -1.4
VBP1-202ENST00000460509 OR14C36Q8NHC7 312 aa6.33□□□□□ -1.4
VBP1-202ENST00000460509 AUTS2Q8WXX7 1259 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 289.9 ms