RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 ANTXR2P58335 489 aa18.85■□□□□ 0.61
TMEM50B-205ENST00000459909 COL9A3Q14050 684 aaPredicted RBP18.85■□□□□ 0.61
TMEM50B-205ENST00000459909 KIZQ2M2Z5 673 aa18.85■□□□□ 0.61
TMEM50B-205ENST00000459909 DHX32Q7L7V1 743 aaKnown RBP18.85■□□□□ 0.61
TMEM50B-205ENST00000459909 OTOP3Q7RTS5 596 aa18.85■□□□□ 0.61
TMEM50B-205ENST00000459909 SIX5Q8N196 739 aa18.85■□□□□ 0.61
TMEM50B-205ENST00000459909 TMEM87AQ8NBN3 555 aa18.85■□□□□ 0.61
TMEM50B-205ENST00000459909 TCEANC2Q96MN5 208 aa18.85■□□□□ 0.61
TMEM50B-205ENST00000459909 MXRA8Q9BRK3 442 aa18.85■□□□□ 0.61
TMEM50B-205ENST00000459909 LZTS2Q9BRK4 669 aa18.85■□□□□ 0.61
TMEM50B-205ENST00000459909 PCDHA6Q9UN73 950 aa18.85■□□□□ 0.61
TMEM50B-205ENST00000459909 PCDHA8Q9Y5H6 950 aa18.85■□□□□ 0.61
TMEM50B-205ENST00000459909 ZNF292O60281 2723 aa18.85■□□□□ 0.61
TMEM50B-205ENST00000459909 DNAH14Q0VDD8 3507 aa18.84■□□□□ 0.61
TMEM50B-205ENST00000459909 IGKV6D-21A0A0A0MT36 114 aa18.84■□□□□ 0.61
TMEM50B-205ENST00000459909 ARP10275 920 aa18.84■□□□□ 0.61
TMEM50B-205ENST00000459909 KIF5BP33176 963 aa18.84■□□□□ 0.61
TMEM50B-205ENST00000459909 FGD1P98174 961 aa18.84■□□□□ 0.61
TMEM50B-205ENST00000459909 GIT2Q14161 759 aa18.84■□□□□ 0.61
TMEM50B-205ENST00000459909 UBE2SQ16763 222 aa18.84■□□□□ 0.61
TMEM50B-205ENST00000459909 ZNF484Q5JVG2 852 aa18.84■□□□□ 0.61
TMEM50B-205ENST00000459909 KANK3Q6NY19 840 aa18.84■□□□□ 0.61
TMEM50B-205ENST00000459909 CTCFLQ8NI51 663 aaPredicted RBP18.84■□□□□ 0.61
TMEM50B-205ENST00000459909 TMEM87BQ96K49 555 aa18.84■□□□□ 0.61
TMEM50B-205ENST00000459909 LRRC2Q9BYS8 371 aa18.84■□□□□ 0.61
TMEM50B-205ENST00000459909 IRAK3Q9Y616 596 aa18.84■□□□□ 0.61
TMEM50B-205ENST00000459909 CYP46A1Q9Y6A2 500 aa18.84■□□□□ 0.61
TMEM50B-205ENST00000459909 DMXL1Q9Y485 3027 aa18.84■□□□□ 0.61
TMEM50B-205ENST00000459909 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.83■□□□□ 0.6
TMEM50B-205ENST00000459909 GPR32O75388 356 aa18.83■□□□□ 0.6
TMEM50B-205ENST00000459909 EPCAMP16422 314 aa18.83■□□□□ 0.6
TMEM50B-205ENST00000459909 ZSCAN20P17040 1043 aaPredicted RBP18.83■□□□□ 0.6
TMEM50B-205ENST00000459909 RPS6KB1P23443 525 aa18.83■□□□□ 0.6
TMEM50B-205ENST00000459909 ALDH7A1P49419 539 aaKnown RBP18.83■□□□□ 0.6
TMEM50B-205ENST00000459909 FAM160B1Q5W0V3 765 aa18.83■□□□□ 0.6
TMEM50B-205ENST00000459909 CCDC149Q6ZUS6 474 aa18.83■□□□□ 0.6
TMEM50B-205ENST00000459909 ECHDC2Q86YB7 292 aa18.83■□□□□ 0.6
TMEM50B-205ENST00000459909 CYP2W1Q8TAV3 490 aa18.83■□□□□ 0.6
TMEM50B-205ENST00000459909 TMEM169Q96HH4 297 aa18.83■□□□□ 0.6
TMEM50B-205ENST00000459909 PPP1R16BQ96T49 567 aa18.83■□□□□ 0.6
TMEM50B-205ENST00000459909 TM6SF1Q9BZW5 370 aa18.83■□□□□ 0.6
TMEM50B-205ENST00000459909 KCNK12Q9HB15 430 aa18.83■□□□□ 0.6
TMEM50B-205ENST00000459909 DLL3Q9NYJ7 618 aa18.83■□□□□ 0.6
TMEM50B-205ENST00000459909 EP300Q09472 2414 aaPredicted RBP18.82■□□□□ 0.6
TMEM50B-205ENST00000459909 BACH1O14867 736 aa18.82■□□□□ 0.6
TMEM50B-205ENST00000459909 KRT37O76014 449 aa18.82■□□□□ 0.6
TMEM50B-205ENST00000459909 RBM25P49756 843 aaKnown RBP18.82■□□□□ 0.6
TMEM50B-205ENST00000459909 METAP2P50579 478 aaKnown RBP eCLIP18.82■□□□□ 0.6
TMEM50B-205ENST00000459909 TMC5Q6UXY8 1006 aa18.82■□□□□ 0.6
TMEM50B-205ENST00000459909 NFXL1Q6ZNB6 911 aa18.82■□□□□ 0.6
TMEM50B-205ENST00000459909 RUFY3Q7L099 469 aa18.82■□□□□ 0.6
TMEM50B-205ENST00000459909 GPR149Q86SP6 731 aa18.82■□□□□ 0.6
TMEM50B-205ENST00000459909 CABP7Q86V35 215 aa18.82■□□□□ 0.6
TMEM50B-205ENST00000459909 VPS52Q8N1B4 723 aa18.82■□□□□ 0.6
TMEM50B-205ENST00000459909 SLC22A17Q8WUG5 538 aa18.82■□□□□ 0.6
TMEM50B-205ENST00000459909 HINFPQ9BQA5 517 aa18.82■□□□□ 0.6
TMEM50B-205ENST00000459909 MTA3Q9BTC8 594 aa18.82■□□□□ 0.6
TMEM50B-205ENST00000459909 MRPL9Q9BYD2 267 aaKnown RBP18.82■□□□□ 0.6
TMEM50B-205ENST00000459909 ZBP1Q9H171 429 aa18.82■□□□□ 0.6
TMEM50B-205ENST00000459909 ZSWIM6Q9HCJ5 1215 aa18.82■□□□□ 0.6
TMEM50B-205ENST00000459909 IGSF9Q9P2J2 1179 aa18.82■□□□□ 0.6
TMEM50B-205ENST00000459909 R4GN57 208 aa18.82■□□□□ 0.6
TMEM50B-205ENST00000459909 ZBTB42B2RXF5 422 aa18.81■□□□□ 0.6
TMEM50B-205ENST00000459909 SH2B2O14492 632 aaPredicted RBP18.81■□□□□ 0.6
TMEM50B-205ENST00000459909 DDAH1O94760 285 aa18.81■□□□□ 0.6
TMEM50B-205ENST00000459909 C22orf31O95567 290 aa18.81■□□□□ 0.6
TMEM50B-205ENST00000459909 GNAQP50148 359 aa18.81■□□□□ 0.6
TMEM50B-205ENST00000459909 EXOSC10Q01780 885 aaKnown RBP18.81■□□□□ 0.6
TMEM50B-205ENST00000459909 ITGB3BPQ13352 177 aaPredicted RBP18.81■□□□□ 0.6
TMEM50B-205ENST00000459909 CLLU1OSQ5K130 101 aa18.81■□□□□ 0.6
TMEM50B-205ENST00000459909 ZC3H14Q6PJT7 736 aaKnown RBP18.81■□□□□ 0.6
TMEM50B-205ENST00000459909 PPFIBP1Q86W92 1011 aa18.81■□□□□ 0.6
TMEM50B-205ENST00000459909 IGDCC4Q8TDY8 1250 aa18.81■□□□□ 0.6
TMEM50B-205ENST00000459909 CNTNAP3BQ96NU0 1288 aa18.81■□□□□ 0.6
TMEM50B-205ENST00000459909 CNTNAP3Q9BZ76 1288 aa18.81■□□□□ 0.6
TMEM50B-205ENST00000459909 SFXN1Q9H9B4 322 aa18.81■□□□□ 0.6
TMEM50B-205ENST00000459909 AGO4Q9HCK5 861 aaKnown RBP18.81■□□□□ 0.6
TMEM50B-205ENST00000459909 WNT16Q9UBV4 365 aa18.81■□□□□ 0.6
TMEM50B-205ENST00000459909 CARNS1A5YM72 827 aa18.8■□□□□ 0.6
TMEM50B-205ENST00000459909 NT5C1B-RDH14C9J2C7 533 aa18.8■□□□□ 0.6
TMEM50B-205ENST00000459909 STK25O00506 426 aa18.8■□□□□ 0.6
TMEM50B-205ENST00000459909 VTNP04004 478 aa18.8■□□□□ 0.6
TMEM50B-205ENST00000459909 CTSAP10619 480 aa18.8■□□□□ 0.6
TMEM50B-205ENST00000459909 POLGP54098 1239 aaPredicted RBP18.8■□□□□ 0.6
TMEM50B-205ENST00000459909 BCAR1P56945 870 aa18.8■□□□□ 0.6
TMEM50B-205ENST00000459909 PDXDC2PQ6P474 469 aa18.8■□□□□ 0.6
TMEM50B-205ENST00000459909 ABHD15Q6UXT9 468 aa18.8■□□□□ 0.6
TMEM50B-205ENST00000459909 ZNF654Q8IZM8 581 aa18.8■□□□□ 0.6
TMEM50B-205ENST00000459909 RNF169Q8NCN4 708 aa18.8■□□□□ 0.6
TMEM50B-205ENST00000459909 RUBCNQ92622 972 aa18.8■□□□□ 0.6
TMEM50B-205ENST00000459909 TBC1D32Q96NH3 1257 aa18.8■□□□□ 0.6
TMEM50B-205ENST00000459909 LY9Q9HBG7 655 aa18.8■□□□□ 0.6
TMEM50B-205ENST00000459909 ZNF302Q9NR11 478 aa18.8■□□□□ 0.6
TMEM50B-205ENST00000459909 CACNA1BQ00975 2339 aa18.79■□□□□ 0.6
TMEM50B-205ENST00000459909 CCDC69A6NI79 296 aa18.79■□□□□ 0.6
TMEM50B-205ENST00000459909 CCNE2O96020 404 aa18.79■□□□□ 0.6
TMEM50B-205ENST00000459909 CEP55Q53EZ4 464 aa18.79■□□□□ 0.6
TMEM50B-205ENST00000459909 Q6ZUG5 572 aa18.79■□□□□ 0.6
TMEM50B-205ENST00000459909 DDX53Q86TM3 631 aaKnown RBP18.79■□□□□ 0.6
TMEM50B-205ENST00000459909 CCDC60Q8IWA6 550 aaPredicted RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms