RNA–Protein interactions for RNA: ENST00000458640.5

DDX39B-214, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-214ENST00000458640 GSTA3Q16772 222 aa12.29□□□□□ -0.44
DDX39B-214ENST00000458640 CFAP221Q4G0U5 840 aa12.29□□□□□ -0.44
DDX39B-214ENST00000458640 ASRGL1Q7L266 308 aa12.29□□□□□ -0.44
DDX39B-214ENST00000458640 OGFOD1Q8N543 542 aa12.29□□□□□ -0.44
DDX39B-214ENST00000458640 RBBP8NLQ8NC74 664 aaPredicted RBP12.29□□□□□ -0.44
DDX39B-214ENST00000458640 FAM136AQ96C01 138 aa12.29□□□□□ -0.44
DDX39B-214ENST00000458640 PBKQ96KB5 322 aa12.29□□□□□ -0.44
DDX39B-214ENST00000458640 FAM81BQ96LP2 452 aa12.29□□□□□ -0.44
DDX39B-214ENST00000458640 DDX4Q9NQI0 724 aaKnown RBP12.29□□□□□ -0.44
DDX39B-214ENST00000458640 ZNF277Q9NRM2 450 aaPredicted RBP12.29□□□□□ -0.44
DDX39B-214ENST00000458640 IL17RBQ9NRM6 502 aa12.29□□□□□ -0.44
DDX39B-214ENST00000458640 SH3GLB1Q9Y371 365 aa12.29□□□□□ -0.44
DDX39B-214ENST00000458640 NFS1Q9Y697 457 aa12.29□□□□□ -0.44
DDX39B-214ENST00000458640 COL2A1P02458 1487 aaPredicted RBP12.29□□□□□ -0.44
DDX39B-214ENST00000458640 MROH7Q68CQ1 1323 aa12.29□□□□□ -0.44
DDX39B-214ENST00000458640 GABPAQ06546 454 aa12.28□□□□□ -0.44
DDX39B-214ENST00000458640 CBX3Q13185 183 aa12.28□□□□□ -0.44
DDX39B-214ENST00000458640 LSAMPQ13449 338 aa12.28□□□□□ -0.44
DDX39B-214ENST00000458640 OTUD7BQ6GQQ9 843 aa12.28□□□□□ -0.44
DDX39B-214ENST00000458640 KLHL10Q6JEL2 608 aa12.28□□□□□ -0.44
DDX39B-214ENST00000458640 RETREG2Q8NC44 543 aa12.28□□□□□ -0.44
DDX39B-214ENST00000458640 DNAJC9Q8WXX5 260 aa12.28□□□□□ -0.44
DDX39B-214ENST00000458640 UPF1Q92900 1129 aaKnown RBP eCLIP12.28□□□□□ -0.44
DDX39B-214ENST00000458640 GFM2Q969S9 779 aaKnown RBP12.28□□□□□ -0.44
DDX39B-214ENST00000458640 GBP5Q96PP8 586 aa12.28□□□□□ -0.44
DDX39B-214ENST00000458640 MED15Q96RN5 788 aa12.28□□□□□ -0.44
DDX39B-214ENST00000458640 RPS6KC1Q96S38 1066 aa12.28□□□□□ -0.44
DDX39B-214ENST00000458640 BHMT2Q9H2M3 363 aa12.28□□□□□ -0.44
DDX39B-214ENST00000458640 ECT2Q9H8V3 914 aa12.28□□□□□ -0.44
DDX39B-214ENST00000458640 IL1RAPL1Q9NZN1 696 aa12.28□□□□□ -0.44
DDX39B-214ENST00000458640 DLGAP2Q9P1A6 1054 aa12.28□□□□□ -0.44
DDX39B-214ENST00000458640 PPP1R1BQ9UD71 204 aaPredicted RBP12.28□□□□□ -0.44
DDX39B-214ENST00000458640 ZNRF3Q9ULT6 936 aa12.28□□□□□ -0.44
DDX39B-214ENST00000458640 CAPN11Q9UMQ6 739 aa12.28□□□□□ -0.44
DDX39B-214ENST00000458640 NFU1Q9UMS0 254 aa12.28□□□□□ -0.44
DDX39B-214ENST00000458640 LUC7L2Q9Y383 392 aaKnown RBP12.28□□□□□ -0.44
DDX39B-214ENST00000458640 IGF2BP3O00425 579 aaKnown RBP eCLIP12.28□□□□□ -0.44
DDX39B-214ENST00000458640 ZNF185O15231 689 aa12.28□□□□□ -0.44
DDX39B-214ENST00000458640 MMP1P03956 469 aa12.28□□□□□ -0.44
DDX39B-214ENST00000458640 TROVE2P10155 538 aaKnown RBP eCLIP12.28□□□□□ -0.44
DDX39B-214ENST00000458640 SKIP12755 728 aa12.28□□□□□ -0.44
DDX39B-214ENST00000458640 CCDC15Q0P6D6 951 aa12.28□□□□□ -0.44
DDX39B-214ENST00000458640 KPNB1Q14974 876 aaKnown RBP12.28□□□□□ -0.44
DDX39B-214ENST00000458640 MYOCDQ8IZQ8 938 aa12.28□□□□□ -0.44
DDX39B-214ENST00000458640 CCDC82Q8N4S0 544 aa12.28□□□□□ -0.44
DDX39B-214ENST00000458640 SAMD3Q8N6K7 520 aa12.28□□□□□ -0.44
DDX39B-214ENST00000458640 KRI1Q8N9T8 703 aaKnown RBP12.28□□□□□ -0.44
DDX39B-214ENST00000458640 STK32AQ8WU08 396 aa12.28□□□□□ -0.44
DDX39B-214ENST00000458640 JDP2Q8WYK2 163 aa12.28□□□□□ -0.44
DDX39B-214ENST00000458640 DDX27Q96GQ7 796 aaKnown RBP12.28□□□□□ -0.44
DDX39B-214ENST00000458640 AIFM3Q96NN9 605 aa12.28□□□□□ -0.44
DDX39B-214ENST00000458640 CORO1BQ9BR76 489 aa12.28□□□□□ -0.44
DDX39B-214ENST00000458640 CNTNAP5Q8WYK1 1306 aa12.27□□□□□ -0.44
DDX39B-214ENST00000458640 PHF20L1A8MW92 1017 aa12.27□□□□□ -0.44
DDX39B-214ENST00000458640 BTBD19C9JJ37 291 aa12.27□□□□□ -0.44
DDX39B-214ENST00000458640 WNT7AO00755 349 aa12.27□□□□□ -0.44
DDX39B-214ENST00000458640 ENTPD3O75355 529 aa12.27□□□□□ -0.44
DDX39B-214ENST00000458640 MAP7Q14244 749 aa12.27□□□□□ -0.44
DDX39B-214ENST00000458640 GRM4Q14833 912 aa12.27□□□□□ -0.44
DDX39B-214ENST00000458640 TRIM68Q6AZZ1 485 aa12.27□□□□□ -0.44
DDX39B-214ENST00000458640 SPICE1Q8N0Z3 855 aa12.27□□□□□ -0.44
DDX39B-214ENST00000458640 ATP11CQ8NB49 1132 aa12.27□□□□□ -0.44
DDX39B-214ENST00000458640 AGBL3Q8NEM8 1001 aa12.27□□□□□ -0.44
DDX39B-214ENST00000458640 POLR3CQ9BUI4 534 aaPredicted RBP12.27□□□□□ -0.44
DDX39B-214ENST00000458640 ISCUQ9H1K1 167 aa12.27□□□□□ -0.44
DDX39B-214ENST00000458640 THAP9Q9H5L6 903 aa12.27□□□□□ -0.44
DDX39B-214ENST00000458640 PI4KBQ9UBF8 816 aa12.27□□□□□ -0.44
DDX39B-214ENST00000458640 WDR46O15213 610 aaKnown RBP12.27□□□□□ -0.45
DDX39B-214ENST00000458640 HEXIM1O94992 359 aaKnown RBP12.27□□□□□ -0.45
DDX39B-214ENST00000458640 PLEKHA8P1O95397 391 aa12.27□□□□□ -0.45
DDX39B-214ENST00000458640 CCNB1P14635 433 aa12.27□□□□□ -0.45
DDX39B-214ENST00000458640 SMARCA1P28370 1054 aa12.27□□□□□ -0.45
DDX39B-214ENST00000458640 RFC5P40937 340 aa12.27□□□□□ -0.45
DDX39B-214ENST00000458640 CARSP49589 748 aaKnown RBP12.27□□□□□ -0.45
DDX39B-214ENST00000458640 PDE6CP51160 858 aa12.27□□□□□ -0.45
DDX39B-214ENST00000458640 KCNJ2P63252 427 aa12.27□□□□□ -0.45
DDX39B-214ENST00000458640 SLC7A5Q01650 507 aa12.27□□□□□ -0.45
DDX39B-214ENST00000458640 NFIAQ12857 509 aa12.27□□□□□ -0.45
DDX39B-214ENST00000458640 BTG3Q14201 252 aaPredicted RBP12.27□□□□□ -0.45
DDX39B-214ENST00000458640 HSP90AA4PQ58FG1 418 aa12.27□□□□□ -0.45
DDX39B-214ENST00000458640 WASHC2DQ5SRD0 308 aa12.27□□□□□ -0.45
DDX39B-214ENST00000458640 RNF220Q5VTB9 566 aa12.27□□□□□ -0.45
DDX39B-214ENST00000458640 ZSCAN29Q8IWY8 852 aaPredicted RBP12.27□□□□□ -0.45
DDX39B-214ENST00000458640 CCDC65Q8IXS2 484 aa12.27□□□□□ -0.45
DDX39B-214ENST00000458640 CMTR1Q8N1G2 835 aaKnown RBP12.27□□□□□ -0.45
DDX39B-214ENST00000458640 LSM14AQ8ND56 463 aaKnown RBP12.27□□□□□ -0.45
DDX39B-214ENST00000458640 ASAP3Q8TDY4 903 aa12.27□□□□□ -0.45
DDX39B-214ENST00000458640 TLCD1Q96CP7 247 aa12.27□□□□□ -0.45
DDX39B-214ENST00000458640 CCDC17Q96LX7 622 aa12.27□□□□□ -0.45
DDX39B-214ENST00000458640 GSDMAQ96QA5 445 aa12.27□□□□□ -0.45
DDX39B-214ENST00000458640 NR1H4Q96RI1 486 aaPredicted RBP12.27□□□□□ -0.45
DDX39B-214ENST00000458640 ARPC5LQ9BPX5 153 aa12.27□□□□□ -0.45
DDX39B-214ENST00000458640 ZCWPW1Q9H0M4 648 aa12.27□□□□□ -0.45
DDX39B-214ENST00000458640 CARD9Q9H257 536 aa12.27□□□□□ -0.45
DDX39B-214ENST00000458640 FOXP1Q9H334 677 aaPredicted RBP12.27□□□□□ -0.45
DDX39B-214ENST00000458640 EPB41L5Q9HCM4 733 aa12.27□□□□□ -0.45
DDX39B-214ENST00000458640 FAM114A2Q9NRY5 505 aa12.27□□□□□ -0.45
DDX39B-214ENST00000458640 CYP39A1Q9NYL5 469 aa12.27□□□□□ -0.45
DDX39B-214ENST00000458640 ATRNL1Q5VV63 1379 aa12.26□□□□□ -0.45
DDX39B-214ENST00000458640 ARFGEF1Q9Y6D6 1849 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms