RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 TAB2Q9NYJ8 693 aa9.67□□□□□ -0.86
RIF1-208ENST00000457745 TRIP12Q14669 1992 aaPredicted RBP9.66□□□□□ -0.86
RIF1-208ENST00000457745 BECN2A8MW95 431 aa9.66□□□□□ -0.86
RIF1-208ENST00000457745 SLC16A4O15374 487 aa9.66□□□□□ -0.86
RIF1-208ENST00000457745 TBCAO75347 108 aaKnown RBP9.66□□□□□ -0.86
RIF1-208ENST00000457745 CAVIN2O95810 425 aa9.66□□□□□ -0.86
RIF1-208ENST00000457745 GLRA2P23416 452 aa9.66□□□□□ -0.86
RIF1-208ENST00000457745 CCND3P30281 292 aaPredicted RBP9.66□□□□□ -0.86
RIF1-208ENST00000457745 FCGRTP55899 365 aa9.66□□□□□ -0.86
RIF1-208ENST00000457745 EMC2Q15006 297 aa9.66□□□□□ -0.86
RIF1-208ENST00000457745 KRT31Q15323 416 aa9.66□□□□□ -0.86
RIF1-208ENST00000457745 BMT2Q1RMZ1 405 aa9.66□□□□□ -0.86
RIF1-208ENST00000457745 XKR3Q5GH77 459 aa9.66□□□□□ -0.86
RIF1-208ENST00000457745 FAM102BQ5T8I3 360 aa9.66□□□□□ -0.86
RIF1-208ENST00000457745 CEP135Q66GS9 1140 aa9.66□□□□□ -0.86
RIF1-208ENST00000457745 SLC39A4Q6P5W5 647 aa9.66□□□□□ -0.86
RIF1-208ENST00000457745 ZC3H3Q8IXZ2 948 aaKnown RBP9.66□□□□□ -0.86
RIF1-208ENST00000457745 MYOCDQ8IZQ8 938 aa9.66□□□□□ -0.86
RIF1-208ENST00000457745 MYCT1Q8N699 235 aa9.66□□□□□ -0.86
RIF1-208ENST00000457745 OR6J1Q8NGC5 347 aa9.66□□□□□ -0.86
RIF1-208ENST00000457745 ATP6V0A1Q93050 837 aa9.66□□□□□ -0.86
RIF1-208ENST00000457745 DHTKD1Q96HY7 919 aaPredicted RBP9.66□□□□□ -0.86
RIF1-208ENST00000457745 FAM84AQ96KN4 292 aa9.66□□□□□ -0.86
RIF1-208ENST00000457745 SRRTQ9BXP5 876 aaKnown RBP9.66□□□□□ -0.86
RIF1-208ENST00000457745 CFHR5Q9BXR6 569 aa9.66□□□□□ -0.86
RIF1-208ENST00000457745 NIFKQ9BYG3 293 aaKnown RBP9.66□□□□□ -0.86
RIF1-208ENST00000457745 POLR3FQ9H1D9 316 aaPredicted RBP9.66□□□□□ -0.86
RIF1-208ENST00000457745 ABHD16BQ9H3Z7 469 aa9.66□□□□□ -0.86
RIF1-208ENST00000457745 DHX33Q9H6R0 707 aaKnown RBP9.66□□□□□ -0.86
RIF1-208ENST00000457745 SMTNL1A8MU46 457 aa9.65□□□□□ -0.86
RIF1-208ENST00000457745 ANKRD63C9JTQ0 380 aa9.65□□□□□ -0.86
RIF1-208ENST00000457745 GOLGA6L19H0YKK7 550 aa9.65□□□□□ -0.86
RIF1-208ENST00000457745 RNF225M0QZC1 329 aaPredicted RBP9.65□□□□□ -0.86
RIF1-208ENST00000457745 GPR25O00155 361 aa9.65□□□□□ -0.86
RIF1-208ENST00000457745 DYNC1LI2O43237 492 aaPredicted RBP9.65□□□□□ -0.86
RIF1-208ENST00000457745 GCNT3O95395 438 aa9.65□□□□□ -0.86
RIF1-208ENST00000457745 ARL2P36404 184 aa9.65□□□□□ -0.86
RIF1-208ENST00000457745 PBX1P40424 430 aa9.65□□□□□ -0.86
RIF1-208ENST00000457745 NPTX2P47972 431 aa9.65□□□□□ -0.86
RIF1-208ENST00000457745 CASP4P49662 377 aa9.65□□□□□ -0.86
RIF1-208ENST00000457745 KLK7P49862 253 aa9.65□□□□□ -0.86
RIF1-208ENST00000457745 PEX3P56589 373 aa9.65□□□□□ -0.86
RIF1-208ENST00000457745 SP3Q02447 781 aa9.65□□□□□ -0.86
RIF1-208ENST00000457745 TNFAIP2Q03169 654 aa9.65□□□□□ -0.86
RIF1-208ENST00000457745 CACNB2Q08289 660 aaPredicted RBP9.65□□□□□ -0.86
RIF1-208ENST00000457745 MIIPQ5JXC2 388 aa9.65□□□□□ -0.86
RIF1-208ENST00000457745 ODR4Q5SWX8 454 aa9.65□□□□□ -0.86
RIF1-208ENST00000457745 ZNF720Q7Z2F6 126 aa9.65□□□□□ -0.86
RIF1-208ENST00000457745 LRRC71Q8N4P6 559 aa9.65□□□□□ -0.86
RIF1-208ENST00000457745 LINC01465Q8N7H1 131 aa9.65□□□□□ -0.86
RIF1-208ENST00000457745 PPTC7Q8NI37 304 aa9.65□□□□□ -0.86
RIF1-208ENST00000457745 ZNF507Q8TCN5 953 aa9.65□□□□□ -0.86
RIF1-208ENST00000457745 ATP8B4Q8TF62 1192 aa9.65□□□□□ -0.86
RIF1-208ENST00000457745 SOCS4Q8WXH5 440 aa9.65□□□□□ -0.86
RIF1-208ENST00000457745 EMID1Q96A84 441 aaPredicted RBP9.65□□□□□ -0.86
RIF1-208ENST00000457745 CCDC34Q96HJ3 373 aa9.65□□□□□ -0.86
RIF1-208ENST00000457745 ZNF830Q96NB3 372 aaPredicted RBP9.65□□□□□ -0.86
RIF1-208ENST00000457745 HS3ST6Q96QI5 342 aa9.65□□□□□ -0.86
RIF1-208ENST00000457745 TRIM5Q9C035 493 aa9.65□□□□□ -0.86
RIF1-208ENST00000457745 NAT10Q9H0A0 1025 aaKnown RBP9.65□□□□□ -0.86
RIF1-208ENST00000457745 KCNF1Q9H3M0 494 aa9.65□□□□□ -0.86
RIF1-208ENST00000457745 MRPL44Q9H9J2 332 aaKnown RBP9.65□□□□□ -0.86
RIF1-208ENST00000457745 PARVGQ9HBI0 331 aa9.65□□□□□ -0.86
RIF1-208ENST00000457745 OLFML3Q9NRN5 406 aa9.65□□□□□ -0.86
RIF1-208ENST00000457745 LIMA1Q9UHB6 759 aaKnown RBP9.65□□□□□ -0.86
RIF1-208ENST00000457745 TCEAL9Q9UHQ7 104 aa9.65□□□□□ -0.86
RIF1-208ENST00000457745 ODF2LQ9ULJ1 636 aa9.65□□□□□ -0.86
RIF1-208ENST00000457745 IGKV6-21A0A0C4DH24 114 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 B4DLN1 442 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 KCNJ18B7U540 433 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 K7ENM7 598 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 NOP56O00567 594 aaKnown RBP9.64□□□□□ -0.87
RIF1-208ENST00000457745 PSMA7O14818 248 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 CLIC2O15247 247 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 C22orf31O95567 290 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 ALDH1A1P00352 501 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 PLS3P13797 630 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 HOXB3P14651 431 aaPredicted RBP9.64□□□□□ -0.87
RIF1-208ENST00000457745 GAP43P17677 238 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 CLCN3P51790 818 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 COPB1P53618 953 aaKnown RBP9.64□□□□□ -0.87
RIF1-208ENST00000457745 NCKAP1LP55160 1127 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 FOXK1P85037 733 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 ZNF200P98182 395 aaPredicted RBP9.64□□□□□ -0.87
RIF1-208ENST00000457745 CCDC173Q0VFZ6 552 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 PSMD2Q13200 908 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 LAMC2Q13753 1193 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 CAPSQ13938 189 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 DSG2Q14126 1118 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 KCNJ12Q14500 433 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 MARCH8Q5T0T0 291 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 IQSEC1Q6DN90 963 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 KCNV1Q6PIU1 500 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 PLPPR4Q7Z2D5 763 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 TLK2Q86UE8 772 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 PLPP6Q8IY26 295 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 MSL3Q8N5Y2 521 aaKnown RBP9.64□□□□□ -0.87
RIF1-208ENST00000457745 KCTD17Q8N5Z5 321 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 CCDC155Q8N6L0 562 aa9.64□□□□□ -0.87
RIF1-208ENST00000457745 TMEM161BQ8NDZ6 487 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms