RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 CFAP58Q5T655 872 aa13.55□□□□□ -0.24
LINC00959-201ENST00000456581 MAATS1Q7Z4T9 603 aa13.55□□□□□ -0.24
LINC00959-201ENST00000456581 TRPM4Q8TD43 1214 aa13.55□□□□□ -0.24
LINC00959-201ENST00000456581 SYNPO2Q9UMS6 1093 aa13.55□□□□□ -0.24
LINC00959-201ENST00000456581 MRPL11Q9Y3B7 192 aaKnown RBP13.55□□□□□ -0.24
LINC00959-201ENST00000456581 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.55□□□□□ -0.24
LINC00959-201ENST00000456581 CAPN7Q9Y6W3 813 aa13.55□□□□□ -0.24
LINC00959-201ENST00000456581 A0A087WUV0 522 aaPredicted RBP13.54□□□□□ -0.24
LINC00959-201ENST00000456581 PRLRP16471 622 aa13.54□□□□□ -0.24
LINC00959-201ENST00000456581 ERVK-9P63128 1117 aa13.54□□□□□ -0.24
LINC00959-201ENST00000456581 FKBP3Q00688 224 aaKnown RBP13.54□□□□□ -0.24
LINC00959-201ENST00000456581 PSMD2Q13200 908 aa13.54□□□□□ -0.24
LINC00959-201ENST00000456581 HLTFQ14527 1009 aaKnown RBP eCLIP13.54□□□□□ -0.24
LINC00959-201ENST00000456581 EMBQ6PCB8 327 aa13.54□□□□□ -0.24
LINC00959-201ENST00000456581 EFCAB13Q8IY85 973 aa13.54□□□□□ -0.24
LINC00959-201ENST00000456581 ERMNQ8TAM6 284 aa13.54□□□□□ -0.24
LINC00959-201ENST00000456581 TSG101Q99816 390 aa13.54□□□□□ -0.24
LINC00959-201ENST00000456581 WDR11Q9BZH6 1224 aa13.54□□□□□ -0.24
LINC00959-201ENST00000456581 POLR2AP24928 1970 aaKnown RBP13.54□□□□□ -0.24
LINC00959-201ENST00000456581 GAS7O60861 476 aa13.54□□□□□ -0.24
LINC00959-201ENST00000456581 ITGA4P13612 1032 aa13.54□□□□□ -0.24
LINC00959-201ENST00000456581 VCAM1P19320 739 aa13.54□□□□□ -0.24
LINC00959-201ENST00000456581 TMOD1P28289 359 aa13.54□□□□□ -0.24
LINC00959-201ENST00000456581 NAB2Q15742 525 aa13.54□□□□□ -0.24
LINC00959-201ENST00000456581 ANGEL2Q5VTE6 544 aaKnown RBP13.54□□□□□ -0.24
LINC00959-201ENST00000456581 ZNF571Q7Z3V5 609 aaPredicted RBP13.54□□□□□ -0.24
LINC00959-201ENST00000456581 FAM160B2Q86V87 743 aa13.54□□□□□ -0.24
LINC00959-201ENST00000456581 IQCKQ8N0W5 287 aa13.54□□□□□ -0.24
LINC00959-201ENST00000456581 SYT2Q8N9I0 419 aaPredicted RBP13.54□□□□□ -0.24
LINC00959-201ENST00000456581 CLEC4DQ8WXI8 215 aa13.54□□□□□ -0.24
LINC00959-201ENST00000456581 INPP4AQ96PE3 977 aaPredicted RBP13.54□□□□□ -0.24
LINC00959-201ENST00000456581 HSD17B14Q9BPX1 270 aa13.54□□□□□ -0.24
LINC00959-201ENST00000456581 DDX47Q9H0S4 455 aaKnown RBP13.54□□□□□ -0.24
LINC00959-201ENST00000456581 KCTD10Q9H3F6 313 aa13.54□□□□□ -0.24
LINC00959-201ENST00000456581 UNC45AQ9H3U1 944 aa13.54□□□□□ -0.24
LINC00959-201ENST00000456581 GDF3Q9NR23 364 aa13.54□□□□□ -0.24
LINC00959-201ENST00000456581 CEP72Q9P209 647 aa13.54□□□□□ -0.24
LINC00959-201ENST00000456581 COPB2P35606 906 aa13.54□□□□□ -0.24
LINC00959-201ENST00000456581 ADAM9Q13443 819 aa13.54□□□□□ -0.24
LINC00959-201ENST00000456581 DCAF17Q5H9S7 520 aaPredicted RBP13.54□□□□□ -0.24
LINC00959-201ENST00000456581 CEP85LQ5SZL2 805 aa13.54□□□□□ -0.24
LINC00959-201ENST00000456581 MEI1Q5TIA1 1274 aa13.54□□□□□ -0.24
LINC00959-201ENST00000456581 ADAT2Q7Z6V5 191 aaKnown RBP13.54□□□□□ -0.24
LINC00959-201ENST00000456581 BANK1Q8NDB2 785 aa13.54□□□□□ -0.24
LINC00959-201ENST00000456581 CAVIN3Q969G5 261 aa13.54□□□□□ -0.24
LINC00959-201ENST00000456581 SGIP1Q9BQI5 828 aa13.54□□□□□ -0.24
LINC00959-201ENST00000456581 ZNF577Q9BSK1 485 aa13.54□□□□□ -0.24
LINC00959-201ENST00000456581 PLAAQ9Y263 795 aa13.54□□□□□ -0.24
LINC00959-201ENST00000456581 RABGAP1Q9Y3P9 1069 aa13.54□□□□□ -0.24
LINC00959-201ENST00000456581 OPA1O60313 960 aa13.53□□□□□ -0.24
LINC00959-201ENST00000456581 SERPING1P05155 500 aa13.53□□□□□ -0.24
LINC00959-201ENST00000456581 ICAM1P05362 532 aa13.53□□□□□ -0.24
LINC00959-201ENST00000456581 GUCY2CP25092 1073 aa13.53□□□□□ -0.24
LINC00959-201ENST00000456581 KCNH2Q12809 1159 aa13.53□□□□□ -0.24
LINC00959-201ENST00000456581 SLC18A3Q16572 532 aa13.53□□□□□ -0.24
LINC00959-201ENST00000456581 NAA35Q5VZE5 725 aa13.53□□□□□ -0.24
LINC00959-201ENST00000456581 MAEAQ7L5Y9 396 aa13.53□□□□□ -0.24
LINC00959-201ENST00000456581 IFT20Q8IY31 132 aa13.53□□□□□ -0.24
LINC00959-201ENST00000456581 PRPF38AQ8NAV1 312 aaKnown RBP13.53□□□□□ -0.24
LINC00959-201ENST00000456581 PPANQ9NQ55 473 aaKnown RBP13.53□□□□□ -0.24
LINC00959-201ENST00000456581 RIPK3Q9Y572 518 aa13.53□□□□□ -0.24
LINC00959-201ENST00000456581 TMCO5BA8MYB1 307 aa13.53□□□□□ -0.24
LINC00959-201ENST00000456581 CEP104O60308 925 aa13.53□□□□□ -0.24
LINC00959-201ENST00000456581 PEX10O60683 326 aa13.53□□□□□ -0.24
LINC00959-201ENST00000456581 FGFR1OPO95684 399 aaKnown RBP13.53□□□□□ -0.24
LINC00959-201ENST00000456581 EIF2AK2P19525 551 aaKnown RBP13.53□□□□□ -0.24
LINC00959-201ENST00000456581 LSP1P33241 339 aa13.53□□□□□ -0.24
LINC00959-201ENST00000456581 UBAP2Q5T6F2 1119 aaKnown RBP13.53□□□□□ -0.24
LINC00959-201ENST00000456581 RBM46Q8TBY0 533 aaKnown RBP13.53□□□□□ -0.24
LINC00959-201ENST00000456581 RPAP3Q9H6T3 665 aaPredicted RBP13.53□□□□□ -0.24
LINC00959-201ENST00000456581 CD248Q9HCU0 757 aa13.53□□□□□ -0.24
LINC00959-201ENST00000456581 BCCIPQ9P287 314 aaKnown RBP eCLIP13.53□□□□□ -0.24
LINC00959-201ENST00000456581 SSU72P8A0A1W2PR75 194 aa13.52□□□□□ -0.24
LINC00959-201ENST00000456581 FRMD3A2A2Y4 597 aa13.52□□□□□ -0.24
LINC00959-201ENST00000456581 TMEM150BA6NC51 233 aa13.52□□□□□ -0.24
LINC00959-201ENST00000456581 FZD9O00144 591 aa13.52□□□□□ -0.24
LINC00959-201ENST00000456581 IPO5O00410 1097 aaKnown RBP13.52□□□□□ -0.24
LINC00959-201ENST00000456581 EPS15P42566 896 aa13.52□□□□□ -0.24
LINC00959-201ENST00000456581 ITIH3Q06033 890 aa13.52□□□□□ -0.24
LINC00959-201ENST00000456581 TNFAIP1Q13829 316 aa13.52□□□□□ -0.24
LINC00959-201ENST00000456581 ZC2HC1CQ53FD0 456 aaPredicted RBP13.52□□□□□ -0.24
LINC00959-201ENST00000456581 RINT1Q6NUQ1 792 aa13.52□□□□□ -0.24
LINC00959-201ENST00000456581 TRIM59Q8IWR1 403 aa13.52□□□□□ -0.24
LINC00959-201ENST00000456581 SLC5A5Q92911 643 aa13.52□□□□□ -0.24
LINC00959-201ENST00000456581 ATG4CQ96DT6 458 aa13.52□□□□□ -0.24
LINC00959-201ENST00000456581 TAAR1Q96RJ0 339 aa13.52□□□□□ -0.24
LINC00959-201ENST00000456581 WRNIP1Q96S55 665 aa13.52□□□□□ -0.24
LINC00959-201ENST00000456581 CELF4Q9BZC1 486 aaKnown RBP13.52□□□□□ -0.24
LINC00959-201ENST00000456581 TRIM31Q9BZY9 425 aa13.52□□□□□ -0.24
LINC00959-201ENST00000456581 RBAK-RBAKDNI3L0D1 243 aa13.52□□□□□ -0.25
LINC00959-201ENST00000456581 TULP1O00294 542 aaPredicted RBP13.52□□□□□ -0.25
LINC00959-201ENST00000456581 CLIC2O15247 247 aa13.52□□□□□ -0.25
LINC00959-201ENST00000456581 ATP2C2O75185 946 aa13.52□□□□□ -0.25
LINC00959-201ENST00000456581 NR1D1P20393 614 aa13.52□□□□□ -0.25
LINC00959-201ENST00000456581 NR2F2P24468 414 aa13.52□□□□□ -0.25
LINC00959-201ENST00000456581 ECHS1P30084 290 aa13.52□□□□□ -0.25
LINC00959-201ENST00000456581 NMT1P30419 496 aaKnown RBP13.52□□□□□ -0.25
LINC00959-201ENST00000456581 CASP4P49662 377 aa13.52□□□□□ -0.25
LINC00959-201ENST00000456581 QPCTQ16769 361 aa13.52□□□□□ -0.25
LINC00959-201ENST00000456581 KIAA1683Q9H0B3 1180 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms