RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 TAF11Q15544 211 aa11.15□□□□□ -0.62
CLIP4-208ENST00000456385 LONRF1Q17RB8 773 aa11.15□□□□□ -0.62
CLIP4-208ENST00000456385 AP1ARQ63HQ0 302 aa11.15□□□□□ -0.62
CLIP4-208ENST00000456385 ASRGL1Q7L266 308 aa11.15□□□□□ -0.62
CLIP4-208ENST00000456385 GLYCTKQ8IVS8 523 aa11.15□□□□□ -0.62
CLIP4-208ENST00000456385 LNX1Q8TBB1 728 aaPredicted RBP11.15□□□□□ -0.62
CLIP4-208ENST00000456385 TBC1D16Q8TBP0 767 aa11.15□□□□□ -0.62
CLIP4-208ENST00000456385 COA7Q96BR5 231 aa11.15□□□□□ -0.62
CLIP4-208ENST00000456385 CRAMP1Q96RY5 1269 aa11.15□□□□□ -0.62
CLIP4-208ENST00000456385 OSBPL1AQ9BXW6 950 aa11.15□□□□□ -0.62
CLIP4-208ENST00000456385 TTC7AQ9ULT0 858 aaPredicted RBP11.15□□□□□ -0.62
CLIP4-208ENST00000456385 ZMYND8Q9ULU4 1186 aaPredicted RBP11.15□□□□□ -0.62
CLIP4-208ENST00000456385 A0A0A6YYK5 440 aaPredicted RBP11.15□□□□□ -0.62
CLIP4-208ENST00000456385 KLHL33A6NCF5 533 aa11.15□□□□□ -0.62
CLIP4-208ENST00000456385 CETN3O15182 167 aa11.15□□□□□ -0.62
CLIP4-208ENST00000456385 MAP3K13O43283 966 aa11.15□□□□□ -0.62
CLIP4-208ENST00000456385 RIPK2O43353 540 aa11.15□□□□□ -0.62
CLIP4-208ENST00000456385 SUN1O94901 812 aa11.15□□□□□ -0.62
CLIP4-208ENST00000456385 MGAT5Q09328 741 aa11.15□□□□□ -0.62
CLIP4-208ENST00000456385 UBE4AQ14139 1066 aa11.15□□□□□ -0.62
CLIP4-208ENST00000456385 PLS1Q14651 629 aa11.15□□□□□ -0.62
CLIP4-208ENST00000456385 TCERG1LQ5VWI1 586 aa11.15□□□□□ -0.62
CLIP4-208ENST00000456385 ZNF444Q8N0Y2 327 aaPredicted RBP11.15□□□□□ -0.62
CLIP4-208ENST00000456385 GDAP1Q8TB36 358 aa11.15□□□□□ -0.62
CLIP4-208ENST00000456385 NAF1Q96HR8 494 aaKnown RBP11.15□□□□□ -0.62
CLIP4-208ENST00000456385 SPZ1Q9BXG8 430 aa11.15□□□□□ -0.62
CLIP4-208ENST00000456385 RAB34Q9BZG1 259 aa11.15□□□□□ -0.62
CLIP4-208ENST00000456385 SEC63Q9UGP8 760 aaKnown RBP11.15□□□□□ -0.62
CLIP4-208ENST00000456385 ARMCX3Q9UH62 379 aaPredicted RBP11.15□□□□□ -0.62
CLIP4-208ENST00000456385 KIAA1024Q9UPX6 916 aa11.15□□□□□ -0.62
CLIP4-208ENST00000456385 NIP7Q9Y221 180 aaKnown RBP eCLIP11.15□□□□□ -0.62
CLIP4-208ENST00000456385 KAT6BQ8WYB5 2073 aa11.15□□□□□ -0.63
CLIP4-208ENST00000456385 SHANK3Q9BYB0 1731 aa11.15□□□□□ -0.63
CLIP4-208ENST00000456385 COL5A2P05997 1499 aaPredicted RBP11.14□□□□□ -0.63
CLIP4-208ENST00000456385 TMEM120BA0PK00 339 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 DPPA5A6NC42 116 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 ANKRD63C9JTQ0 380 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 NTSR2O95665 410 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 AFPP02771 609 aaKnown RBP11.14□□□□□ -0.63
CLIP4-208ENST00000456385 ATP4AP20648 1035 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 ATP11AP98196 1134 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 TNFAIP8L3Q5GJ75 292 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 TTC27Q6P3X3 843 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 CCDC25Q86WR0 208 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 ZDHHC14Q8IZN3 488 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 ANKRD42Q8N9B4 389 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 ANKLE1Q8NAG6 615 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 OLIG1Q8TAK6 271 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 HAS1Q92839 578 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 UTP4Q969X6 686 aaKnown RBP11.14□□□□□ -0.63
CLIP4-208ENST00000456385 ARHGEF26Q96DR7 871 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 LRRC27Q9C0I9 530 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 SIX2Q9NPC8 291 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 HOMER3Q9NSC5 361 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 ZFATQ9P243 1243 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 CNOT7Q9UIV1 285 aaKnown RBP11.14□□□□□ -0.63
CLIP4-208ENST00000456385 MINPP1Q9UNW1 487 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 GOLGA6L10A0A0M3HER8 536 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 MPHOSPH10O00566 681 aaKnown RBP11.14□□□□□ -0.63
CLIP4-208ENST00000456385 AKAP3O75969 853 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 PTGIRP43119 386 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 TNNI2P48788 182 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 TUBP50607 506 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 JAM2P57087 298 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 LACTBP83111 547 aaPredicted RBP11.14□□□□□ -0.63
CLIP4-208ENST00000456385 PPATQ06203 517 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 MPP2Q14168 576 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 EPHA7Q15375 998 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 GNPTABQ3T906 1256 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 SPATA21Q7Z572 469 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 VPS36Q86VN1 386 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 GPBP1Q86WP2 473 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 DDX23Q9BUQ8 820 aaKnown RBP11.14□□□□□ -0.63
CLIP4-208ENST00000456385 BMP2KQ9NSY1 1161 aaPredicted RBP11.14□□□□□ -0.63
CLIP4-208ENST00000456385 TAS2R14Q9NYV8 317 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 CTNNAL1Q9UBT7 734 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 SAP30BPQ9UHR5 308 aaKnown RBP11.14□□□□□ -0.63
CLIP4-208ENST00000456385 PTPN22Q9Y2R2 807 aa11.14□□□□□ -0.63
CLIP4-208ENST00000456385 KIAA1551Q9HCM1 1747 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 POTEB3A0JP26 581 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 POTECB2RU33 542 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 GJB6O95452 261 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 PLA2G4BP0C869 781 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 XRCC5P13010 732 aaKnown RBP11.13□□□□□ -0.63
CLIP4-208ENST00000456385 VCAM1P19320 739 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 MARCKSL1P49006 195 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 CASP4P49662 377 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 CTCFP49711 727 aaPredicted RBP11.13□□□□□ -0.63
CLIP4-208ENST00000456385 NPEPPSP55786 919 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 ADCY1Q08828 1119 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 UBE2SQ16763 222 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 CGB2Q6NT52 195 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 POTEBQ6S5H4 581 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 VSTM1Q6UX27 236 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 TAOK1Q7L7X3 1001 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 CCDC65Q8IXS2 484 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 PRELID2Q8N945 189 aa11.13□□□□□ -0.63
CLIP4-208ENST00000456385 SH3RF3Q8TEJ3 882 aaPredicted RBP11.13□□□□□ -0.63
CLIP4-208ENST00000456385 ARHGEF2Q92974 986 aaKnown RBP11.13□□□□□ -0.63
CLIP4-208ENST00000456385 IFT74Q96LB3 600 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms