RNA–Protein interactions for RNA: ENST00000456257.1

ERCC3-204, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-204ENST00000456257 FBXL18Q96ME1 805 aa8.25□□□□□ -1.09
ERCC3-204ENST00000456257 DNAJC7Q99615 494 aa8.25□□□□□ -1.09
ERCC3-204ENST00000456257 NAA15Q9BXJ9 866 aaKnown RBP8.25□□□□□ -1.09
ERCC3-204ENST00000456257 TMEM206Q9H813 350 aa8.25□□□□□ -1.09
ERCC3-204ENST00000456257 ZNF302Q9NR11 478 aa8.25□□□□□ -1.09
ERCC3-204ENST00000456257 TAB2Q9NYJ8 693 aa8.25□□□□□ -1.09
ERCC3-204ENST00000456257 PKD2L1Q9P0L9 805 aa8.25□□□□□ -1.09
ERCC3-204ENST00000456257 TBC1D7Q9P0N9 293 aa8.25□□□□□ -1.09
ERCC3-204ENST00000456257 ARHGAP28Q9P2N2 729 aa8.25□□□□□ -1.09
ERCC3-204ENST00000456257 STYXL1Q9Y6J8 313 aa8.25□□□□□ -1.09
ERCC3-204ENST00000456257 EMSYQ7Z589 1322 aa8.25□□□□□ -1.09
ERCC3-204ENST00000456257 TRPM7Q96QT4 1865 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 H0YCG3 227 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 CA12O43570 354 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 MAFO75444 373 aaPredicted RBP8.24□□□□□ -1.09
ERCC3-204ENST00000456257 GCNT3O95395 438 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 NR3C1P04150 777 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 OATP04181 439 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 NPTX2P47972 431 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 FXR1P51114 621 aaKnown RBP eCLIP8.24□□□□□ -1.09
ERCC3-204ENST00000456257 NKX3-2P78367 333 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 UBXN1Q04323 297 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 RAD51AP2Q09MP3 1159 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 KCNMA1Q12791 1236 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 MAP2K5Q13163 448 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 MEA1Q16626 185 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 HSDL1Q3SXM5 330 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 ZC2HC1CQ53FD0 456 aaPredicted RBP8.24□□□□□ -1.09
ERCC3-204ENST00000456257 BRDTQ58F21 947 aaPredicted RBP8.24□□□□□ -1.09
ERCC3-204ENST00000456257 UTP14CQ5TAP6 766 aaKnown RBP8.24□□□□□ -1.09
ERCC3-204ENST00000456257 FAM160B1Q5W0V3 765 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 CEP135Q66GS9 1140 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 OLFML2BQ68BL8 750 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 SMYD5Q6GMV2 418 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 HAUS6Q7Z4H7 955 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 REM2Q8IYK8 340 aaPredicted RBP8.24□□□□□ -1.09
ERCC3-204ENST00000456257 PIP4P2Q8N4L2 257 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 SMC1BQ8NDV3 1235 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 ATP8B4Q8TF62 1192 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 BBXQ8WY36 941 aaPredicted RBP8.24□□□□□ -1.09
ERCC3-204ENST00000456257 SYN2Q92777 582 aaPredicted RBP8.24□□□□□ -1.09
ERCC3-204ENST00000456257 CEP170P1Q96L14 293 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 ACCSQ96QU6 501 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 TINF2Q9BSI4 451 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 NOC4LQ9BVI4 516 aaKnown RBP8.24□□□□□ -1.09
ERCC3-204ENST00000456257 CFHR5Q9BXR6 569 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 GBP3Q9H0R5 595 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 ABHD16BQ9H3Z7 469 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 SMARCAD1Q9H4L7 1026 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 TMEM134Q9H6X4 195 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 PLCB1Q9NQ66 1216 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 AGPAT3Q9NRZ7 376 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.24□□□□□ -1.09
ERCC3-204ENST00000456257 SLC5A4Q9NY91 659 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 FBXL5Q9UKA1 691 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 Q9Y3F1 56 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 LOXHD1Q8IVV2 1947 aa8.24□□□□□ -1.09
ERCC3-204ENST00000456257 ZNFX1Q9P2E3 1918 aaKnown RBP8.24□□□□□ -1.09
ERCC3-204ENST00000456257 KIAA1217Q5T5P2 1943 aa8.23□□□□□ -1.09
ERCC3-204ENST00000456257 TTC26A0AVF1 554 aa8.23□□□□□ -1.09
ERCC3-204ENST00000456257 TMEM150BA6NC51 233 aa8.23□□□□□ -1.09
ERCC3-204ENST00000456257 ARHGAP6O43182 974 aa8.23□□□□□ -1.09
ERCC3-204ENST00000456257 HBP1O60381 514 aa8.23□□□□□ -1.09
ERCC3-204ENST00000456257 OFD1O75665 1012 aa8.23□□□□□ -1.09
ERCC3-204ENST00000456257 AKAP3O75969 853 aa8.23□□□□□ -1.09
ERCC3-204ENST00000456257 GH1P01241 217 aa8.23□□□□□ -1.09
ERCC3-204ENST00000456257 TUBB4AP04350 444 aa8.23□□□□□ -1.09
ERCC3-204ENST00000456257 TPM2P07951 284 aa8.23□□□□□ -1.09
ERCC3-204ENST00000456257 TXNP10599 105 aaKnown RBP8.23□□□□□ -1.09
ERCC3-204ENST00000456257 XRCC5P13010 732 aaKnown RBP8.23□□□□□ -1.09
ERCC3-204ENST00000456257 NR2F2P24468 414 aa8.23□□□□□ -1.09
ERCC3-204ENST00000456257 MSNP26038 577 aaKnown RBP8.23□□□□□ -1.09
ERCC3-204ENST00000456257 PSMC2P35998 433 aaKnown RBP8.23□□□□□ -1.09
ERCC3-204ENST00000456257 TCF7P36402 384 aaPredicted RBP8.23□□□□□ -1.09
ERCC3-204ENST00000456257 MTIF2P46199 727 aaKnown RBP8.23□□□□□ -1.09
ERCC3-204ENST00000456257 SMTNP53814 917 aa8.23□□□□□ -1.09
ERCC3-204ENST00000456257 ZBED6P86452 979 aa8.23□□□□□ -1.09
ERCC3-204ENST00000456257 SREBF2Q12772 1141 aa8.23□□□□□ -1.09
ERCC3-204ENST00000456257 PPP2R5AQ15172 486 aa8.23□□□□□ -1.09
ERCC3-204ENST00000456257 DUSP28Q4G0W2 176 aa8.23□□□□□ -1.09
ERCC3-204ENST00000456257 IER5Q5VY09 327 aa8.23□□□□□ -1.09
ERCC3-204ENST00000456257 E4F1Q66K89 784 aaPredicted RBP8.23□□□□□ -1.09
ERCC3-204ENST00000456257 PLA2G4FQ68DD2 849 aa8.23□□□□□ -1.09
ERCC3-204ENST00000456257 ZNF662Q6ZS27 426 aa8.23□□□□□ -1.09
ERCC3-204ENST00000456257 HS2ST1Q7LGA3 356 aa8.23□□□□□ -1.09
ERCC3-204ENST00000456257 TAS1R3Q7RTX0 852 aa8.23□□□□□ -1.09
ERCC3-204ENST00000456257 PPFIBP1Q86W92 1011 aa8.23□□□□□ -1.09
ERCC3-204ENST00000456257 IFNLR1Q8IU57 520 aaPredicted RBP8.23□□□□□ -1.09
ERCC3-204ENST00000456257 CNGA4Q8IV77 575 aa8.23□□□□□ -1.09
ERCC3-204ENST00000456257 MAP4K3Q8IVH8 894 aa8.23□□□□□ -1.09
ERCC3-204ENST00000456257 NELFCDQ8IXH7 590 aa8.23□□□□□ -1.09
ERCC3-204ENST00000456257 DHX37Q8IY37 1157 aaKnown RBP8.23□□□□□ -1.09
ERCC3-204ENST00000456257 LINC01465Q8N7H1 131 aa8.23□□□□□ -1.09
ERCC3-204ENST00000456257 OR8K1Q8NGG5 319 aa8.23□□□□□ -1.09
ERCC3-204ENST00000456257 PPTC7Q8NI37 304 aa8.23□□□□□ -1.09
ERCC3-204ENST00000456257 NPLOC4Q8TAT6 608 aa8.23□□□□□ -1.09
ERCC3-204ENST00000456257 BSNDQ8WZ55 320 aa8.23□□□□□ -1.09
ERCC3-204ENST00000456257 SLC35C1Q96A29 364 aa8.23□□□□□ -1.09
ERCC3-204ENST00000456257 MLXIPQ9HAP2 919 aa8.23□□□□□ -1.09
ERCC3-204ENST00000456257 ZFYVE28Q9HCC9 887 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms