RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 CNOT10Q9H9A5 744 aaKnown RBP10.94□□□□□ -0.66
CHCHD4P3-201ENST00000455954 EPB41L5Q9HCM4 733 aa10.94□□□□□ -0.66
CHCHD4P3-201ENST00000455954 SRRDQ9UH36 339 aa10.94□□□□□ -0.66
CHCHD4P3-201ENST00000455954 PTCH2Q9Y6C5 1203 aa10.94□□□□□ -0.66
CHCHD4P3-201ENST00000455954 GMNCA6NCL1 334 aa10.93□□□□□ -0.66
CHCHD4P3-201ENST00000455954 GCOM1H8Y6P7 765 aaPredicted RBP10.93□□□□□ -0.66
CHCHD4P3-201ENST00000455954 SMIM22K7EJ46 135 aa10.93□□□□□ -0.66
CHCHD4P3-201ENST00000455954 PLEKP08567 350 aaPredicted RBP10.93□□□□□ -0.66
CHCHD4P3-201ENST00000455954 MYZAPP0CAP1 466 aa10.93□□□□□ -0.66
CHCHD4P3-201ENST00000455954 GNA11P29992 359 aa10.93□□□□□ -0.66
CHCHD4P3-201ENST00000455954 SLC8A1P32418 973 aa10.93□□□□□ -0.66
CHCHD4P3-201ENST00000455954 FXR2P51116 673 aaKnown RBP eCLIP10.93□□□□□ -0.66
CHCHD4P3-201ENST00000455954 SLC7A5Q01650 507 aa10.93□□□□□ -0.66
CHCHD4P3-201ENST00000455954 GUCY2DQ02846 1103 aa10.93□□□□□ -0.66
CHCHD4P3-201ENST00000455954 MLLT1Q03111 559 aaPredicted RBP10.93□□□□□ -0.66
CHCHD4P3-201ENST00000455954 EHHADHQ08426 723 aa10.93□□□□□ -0.66
CHCHD4P3-201ENST00000455954 PPP2R5EQ16537 467 aa10.93□□□□□ -0.66
CHCHD4P3-201ENST00000455954 SLC18A3Q16572 532 aa10.93□□□□□ -0.66
CHCHD4P3-201ENST00000455954 FAM110CQ1W6H9 321 aa10.93□□□□□ -0.66
CHCHD4P3-201ENST00000455954 LRRC55Q6ZSA7 311 aa10.93□□□□□ -0.66
CHCHD4P3-201ENST00000455954 CCDC121Q6ZUS5 278 aa10.93□□□□□ -0.66
CHCHD4P3-201ENST00000455954 RRAGAQ7L523 313 aa10.93□□□□□ -0.66
CHCHD4P3-201ENST00000455954 CROCCP2Q86T23 111 aa10.93□□□□□ -0.66
CHCHD4P3-201ENST00000455954 USP38Q8NB14 1042 aa10.93□□□□□ -0.66
CHCHD4P3-201ENST00000455954 ACTRT1Q8TDG2 376 aa10.93□□□□□ -0.66
CHCHD4P3-201ENST00000455954 ACER1Q8TDN7 264 aa10.93□□□□□ -0.66
CHCHD4P3-201ENST00000455954 MTMR8Q96EF0 704 aa10.93□□□□□ -0.66
CHCHD4P3-201ENST00000455954 P2RX7Q99572 595 aaKnown RBP10.93□□□□□ -0.66
CHCHD4P3-201ENST00000455954 RAB34Q9BZG1 259 aa10.93□□□□□ -0.66
CHCHD4P3-201ENST00000455954 ZMYND12Q9H0C1 365 aa10.93□□□□□ -0.66
CHCHD4P3-201ENST00000455954 SLITRK6Q9H5Y7 841 aa10.93□□□□□ -0.66
CHCHD4P3-201ENST00000455954 MMRN2Q9H8L6 949 aa10.93□□□□□ -0.66
CHCHD4P3-201ENST00000455954 KLC4Q9NSK0 619 aa10.93□□□□□ -0.66
CHCHD4P3-201ENST00000455954 MCM8Q9UJA3 840 aa10.93□□□□□ -0.66
CHCHD4P3-201ENST00000455954 NFU1Q9UMS0 254 aa10.93□□□□□ -0.66
CHCHD4P3-201ENST00000455954 MYPNQ86TC9 1320 aa10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 TSPY2A6NKD2 308 aa10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 USP17L15C9J2P7 530 aa10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 USP17L13C9JLJ4 530 aa10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 USP17L11C9JVI0 530 aa10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 USP17L18D6R9N7 530 aa10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 USP17L22D6RA61 530 aa10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 USP17L17D6RBQ6 530 aa10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 USP17L19D6RCP7 530 aa10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 USP17L20D6RJB6 530 aa10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 TNPO2O14787 897 aaKnown RBP10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 TRAPPC3O43617 180 aa10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 DNAJC8O75937 253 aaPredicted RBP10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 GLI1P08151 1106 aa10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 GSTA1P08263 222 aa10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 AKR1B1P15121 316 aa10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 EIF3BP55884 814 aaKnown RBP10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 LMNB2Q03252 620 aa10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 USP17L24Q0WX57 530 aa10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 CLUL1Q15846 466 aa10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 ZYXQ15942 572 aaKnown RBP10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 TMEM266Q2M3C6 531 aa10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 NEK8Q86SG6 692 aa10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 ZC3H3Q8IXZ2 948 aaKnown RBP10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 CCDC13Q8IYE1 715 aa10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 PNMA1Q8ND90 353 aa10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 GIMAP7Q8NHV1 300 aa10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 RAET1EQ8TD07 263 aa10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 SCFD2Q8WU76 684 aa10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 GTF3C2Q8WUA4 911 aaPredicted RBP10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 CYFIP2Q96F07 1278 aa10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 C6orf50Q9HD87 102 aa10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 AIPL1Q9NZN9 384 aa10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 MORF4L1Q9UBU8 362 aa10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 SLC12A6Q9UHW9 1150 aa10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 PLAAQ9Y263 795 aa10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 BZW2Q9Y6E2 419 aaKnown RBP10.92□□□□□ -0.66
CHCHD4P3-201ENST00000455954 ZSWIM8A7E2V4 1837 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 A0A0A6YYK5 440 aaPredicted RBP10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 LOC102724159A0A0B4J2E5 919 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 A0A1W2PRG0 241 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 PALM3A6NDB9 673 aaPredicted RBP10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 PP2D1A8MPX8 630 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 H0YGN5 161 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 PALMO75781 387 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 GFPT2O94808 682 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 SLC1A4P43007 532 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 MATR3P43243 847 aaKnown RBP eCLIP10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 ATP1A2P50993 1020 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 USP11P51784 963 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 MRPL12P52815 198 aaKnown RBP10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 PPP2R2AP63151 447 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 FKBP3Q00688 224 aaKnown RBP10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 PRKCZQ05513 592 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 XRCC4Q13426 336 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 PDIA5Q14554 519 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 PWP2Q15269 919 aaKnown RBP10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 SNCBQ16143 134 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 INF2Q27J81 1249 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 CEP85LQ5SZL2 805 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 PPP4R3CPQ6ZMV5 832 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 CATSPERGQ6ZRH7 1159 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 MAATS1Q7Z4T9 603 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 SH2D3CQ8N5H7 860 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 GPRC5AQ8NFJ5 357 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms