RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 TFDP1Q14186 410 aa15.87■□□□□ 0.13
HMGXB4-204ENST00000455359 MCM6Q14566 821 aa15.87■□□□□ 0.13
HMGXB4-204ENST00000455359 PPP2R5AQ15172 486 aa15.87■□□□□ 0.13
HMGXB4-204ENST00000455359 CNNM4Q6P4Q7 775 aa15.87■□□□□ 0.13
HMGXB4-204ENST00000455359 TRAF7Q6Q0C0 670 aa15.87■□□□□ 0.13
HMGXB4-204ENST00000455359 SH3RF1Q7Z6J0 888 aa15.87■□□□□ 0.13
HMGXB4-204ENST00000455359 GPBP1Q86WP2 473 aa15.87■□□□□ 0.13
HMGXB4-204ENST00000455359 CEP57L1Q8IYX8 460 aa15.87■□□□□ 0.13
HMGXB4-204ENST00000455359 TMEM199Q8N511 208 aa15.87■□□□□ 0.13
HMGXB4-204ENST00000455359 TMEM143Q96AN5 459 aa15.87■□□□□ 0.13
HMGXB4-204ENST00000455359 DHX58Q96C10 678 aa15.87■□□□□ 0.13
HMGXB4-204ENST00000455359 ZBTB10Q96DT7 871 aa15.87■□□□□ 0.13
HMGXB4-204ENST00000455359 CELF4Q9BZC1 486 aaKnown RBP15.87■□□□□ 0.13
HMGXB4-204ENST00000455359 COL4A3BPQ9Y5P4 624 aa15.87■□□□□ 0.13
HMGXB4-204ENST00000455359 TRPV2Q9Y5S1 764 aa15.87■□□□□ 0.13
HMGXB4-204ENST00000455359 PFKMP08237 780 aa15.86■□□□□ 0.13
HMGXB4-204ENST00000455359 SCP2P22307 547 aa15.86■□□□□ 0.13
HMGXB4-204ENST00000455359 GPC3P51654 580 aa15.86■□□□□ 0.13
HMGXB4-204ENST00000455359 CRYBB1P53674 252 aaPredicted RBP15.86■□□□□ 0.13
HMGXB4-204ENST00000455359 FAM160A1Q05DH4 1040 aa15.86■□□□□ 0.13
HMGXB4-204ENST00000455359 MGAT3Q09327 533 aa15.86■□□□□ 0.13
HMGXB4-204ENST00000455359 LAMTOR4Q0VGL1 99 aa15.86■□□□□ 0.13
HMGXB4-204ENST00000455359 DRP2Q13474 957 aa15.86■□□□□ 0.13
HMGXB4-204ENST00000455359 PCBP1Q15365 356 aaKnown RBP eCLIP15.86■□□□□ 0.13
HMGXB4-204ENST00000455359 ARSHQ5FYA8 562 aa15.86■□□□□ 0.13
HMGXB4-204ENST00000455359 ZNF618Q5T7W0 954 aa15.86■□□□□ 0.13
HMGXB4-204ENST00000455359 FAM102BQ5T8I3 360 aa15.86■□□□□ 0.13
HMGXB4-204ENST00000455359 KANK3Q6NY19 840 aa15.86■□□□□ 0.13
HMGXB4-204ENST00000455359 PRPF31Q8WWY3 499 aaKnown RBP15.86■□□□□ 0.13
HMGXB4-204ENST00000455359 RUSC1Q9BVN2 902 aa15.86■□□□□ 0.13
HMGXB4-204ENST00000455359 NFKBIZQ9BYH8 718 aa15.86■□□□□ 0.13
HMGXB4-204ENST00000455359 INO80BQ9C086 356 aaPredicted RBP15.86■□□□□ 0.13
HMGXB4-204ENST00000455359 ADAMTS10Q9H324 1103 aa15.86■□□□□ 0.13
HMGXB4-204ENST00000455359 MYH15Q9Y2K3 1946 aa15.86■□□□□ 0.13
HMGXB4-204ENST00000455359 MKI67P46013 3256 aaKnown RBP15.85■□□□□ 0.13
HMGXB4-204ENST00000455359 PHLPP2Q6ZVD8 1323 aa15.85■□□□□ 0.13
HMGXB4-204ENST00000455359 GPR32O75388 356 aa15.85■□□□□ 0.13
HMGXB4-204ENST00000455359 PRPF40AO75400 957 aaKnown RBP15.85■□□□□ 0.13
HMGXB4-204ENST00000455359 CHRNA1P02708 482 aa15.85■□□□□ 0.13
HMGXB4-204ENST00000455359 CYP2C18P33260 490 aa15.85■□□□□ 0.13
HMGXB4-204ENST00000455359 ODR4Q5SWX8 454 aa15.85■□□□□ 0.13
HMGXB4-204ENST00000455359 IFNLR1Q8IU57 520 aaPredicted RBP15.85■□□□□ 0.13
HMGXB4-204ENST00000455359 RHPN2Q8IUC4 686 aa15.85■□□□□ 0.13
HMGXB4-204ENST00000455359 ELOA2Q8IYF1 753 aaPredicted RBP15.85■□□□□ 0.13
HMGXB4-204ENST00000455359 RPUSD2Q8IZ73 545 aaKnown RBP15.85■□□□□ 0.13
HMGXB4-204ENST00000455359 FMR1NBQ8N0W7 255 aaPredicted RBP15.85■□□□□ 0.13
HMGXB4-204ENST00000455359 IFT74Q96LB3 600 aa15.85■□□□□ 0.13
HMGXB4-204ENST00000455359 TIGD1Q96MW7 591 aa15.85■□□□□ 0.13
HMGXB4-204ENST00000455359 LBHD1Q9BQE6 289 aaPredicted RBP15.85■□□□□ 0.13
HMGXB4-204ENST00000455359 GCOM2Q9BZD3 368 aaPredicted RBP15.85■□□□□ 0.13
HMGXB4-204ENST00000455359 PPP1R12CQ9BZL4 782 aa15.85■□□□□ 0.13
HMGXB4-204ENST00000455359 POLR3FQ9H1D9 316 aaPredicted RBP15.85■□□□□ 0.13
HMGXB4-204ENST00000455359 WNT8AQ9H1J5 351 aa15.85■□□□□ 0.13
HMGXB4-204ENST00000455359 CDY2AQ9Y6F7 541 aa15.85■□□□□ 0.13
HMGXB4-204ENST00000455359 DNAH12Q6ZR08 3092 aa15.85■□□□□ 0.13
HMGXB4-204ENST00000455359 MYH9P35579 1960 aaKnown RBP15.85■□□□□ 0.13
HMGXB4-204ENST00000455359 ACTN4O43707 911 aaKnown RBP15.84■□□□□ 0.13
HMGXB4-204ENST00000455359 HIP1RO75146 1068 aa15.84■□□□□ 0.13
HMGXB4-204ENST00000455359 ZNF202O95125 648 aa15.84■□□□□ 0.13
HMGXB4-204ENST00000455359 CXCL10P02778 98 aa15.84■□□□□ 0.13
HMGXB4-204ENST00000455359 VTNP04004 478 aa15.84■□□□□ 0.13
HMGXB4-204ENST00000455359 KRT18P05783 430 aaKnown RBP15.84■□□□□ 0.13
HMGXB4-204ENST00000455359 GLRA2P23416 452 aa15.84■□□□□ 0.13
HMGXB4-204ENST00000455359 NAMPTP43490 491 aa15.84■□□□□ 0.13
HMGXB4-204ENST00000455359 ZNF131P52739 623 aa15.84■□□□□ 0.13
HMGXB4-204ENST00000455359 NLRP11P59045 1033 aaKnown RBP15.84■□□□□ 0.13
HMGXB4-204ENST00000455359 SRGAP1Q7Z6B7 1085 aa15.84■□□□□ 0.13
HMGXB4-204ENST00000455359 SLC17A8Q8NDX2 589 aa15.84■□□□□ 0.13
HMGXB4-204ENST00000455359 ENGASEQ8NFI3 743 aa15.84■□□□□ 0.13
HMGXB4-204ENST00000455359 SPIRE2Q8WWL2 714 aa15.84■□□□□ 0.13
HMGXB4-204ENST00000455359 NLRP7Q8WX94 980 aa15.84■□□□□ 0.13
HMGXB4-204ENST00000455359 KCNN1Q92952 543 aa15.84■□□□□ 0.13
HMGXB4-204ENST00000455359 C7orf25Q9BPX7 421 aa15.84■□□□□ 0.13
HMGXB4-204ENST00000455359 NTPCRQ9BSD7 190 aaKnown RBP15.84■□□□□ 0.13
HMGXB4-204ENST00000455359 GOLPH3LQ9H4A5 285 aa15.84■□□□□ 0.13
HMGXB4-204ENST00000455359 LARSQ9P2J5 1176 aaKnown RBP15.84■□□□□ 0.13
HMGXB4-204ENST00000455359 MYMKA6NI61 221 aa15.83■□□□□ 0.12
HMGXB4-204ENST00000455359 H0YCG3 227 aa15.83■□□□□ 0.12
HMGXB4-204ENST00000455359 TBCAO75347 108 aaKnown RBP15.83■□□□□ 0.12
HMGXB4-204ENST00000455359 CTSHP09668 335 aa15.83■□□□□ 0.12
HMGXB4-204ENST00000455359 PLS3P13797 630 aa15.83■□□□□ 0.12
HMGXB4-204ENST00000455359 DARSP14868 501 aaKnown RBP15.83■□□□□ 0.12
HMGXB4-204ENST00000455359 EIF4BP23588 611 aaKnown RBP15.83■□□□□ 0.12
HMGXB4-204ENST00000455359 ITGB8P26012 769 aa15.83■□□□□ 0.12
HMGXB4-204ENST00000455359 ABCD1P33897 745 aa15.83■□□□□ 0.12
HMGXB4-204ENST00000455359 PHKA2P46019 1235 aa15.83■□□□□ 0.12
HMGXB4-204ENST00000455359 CCL23P55773 120 aa15.83■□□□□ 0.12
HMGXB4-204ENST00000455359 DMP1Q13316 513 aaPredicted RBP15.83■□□□□ 0.12
HMGXB4-204ENST00000455359 PPIGQ13427 754 aaKnown RBP eCLIP15.83■□□□□ 0.12
HMGXB4-204ENST00000455359 GIT2Q14161 759 aa15.83■□□□□ 0.12
HMGXB4-204ENST00000455359 DHX8Q14562 1220 aaKnown RBP15.83■□□□□ 0.12
HMGXB4-204ENST00000455359 KIZQ2M2Z5 673 aa15.83■□□□□ 0.12
HMGXB4-204ENST00000455359 LONRF3Q496Y0 759 aa15.83■□□□□ 0.12
HMGXB4-204ENST00000455359 FBXO47Q5MNV8 452 aa15.83■□□□□ 0.12
HMGXB4-204ENST00000455359 KRBA2Q6ZNG9 492 aa15.83■□□□□ 0.12
HMGXB4-204ENST00000455359 CNNM3Q8NE01 707 aa15.83■□□□□ 0.12
HMGXB4-204ENST00000455359 ASAP3Q8TDY4 903 aa15.83■□□□□ 0.12
HMGXB4-204ENST00000455359 DDX12PQ92771 950 aa15.83■□□□□ 0.12
HMGXB4-204ENST00000455359 SCLT1Q96NL6 688 aa15.83■□□□□ 0.12
HMGXB4-204ENST00000455359 REEP2Q9BRK0 252 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms