RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 GAS7O60861 476 aa18.11■□□□□ 0.49
GPC1-206ENST00000455111 FGF18O76093 207 aa18.11■□□□□ 0.49
GPC1-206ENST00000455111 CTDNEP1O95476 244 aa18.11■□□□□ 0.49
GPC1-206ENST00000455111 EYA4O95677 639 aa18.11■□□□□ 0.49
GPC1-206ENST00000455111 EIF4BP23588 611 aaKnown RBP18.11■□□□□ 0.49
GPC1-206ENST00000455111 AKAP17AQ02040 695 aaKnown RBP18.11■□□□□ 0.49
GPC1-206ENST00000455111 SSRP1Q08945 709 aaKnown RBP18.11■□□□□ 0.49
GPC1-206ENST00000455111 SMAD4Q13485 552 aaKnown RBP18.11■□□□□ 0.49
GPC1-206ENST00000455111 KCNC3Q14003 757 aa18.11■□□□□ 0.49
GPC1-206ENST00000455111 CLLU1OSQ5K130 101 aa18.11■□□□□ 0.49
GPC1-206ENST00000455111 TEKT3Q9BXF9 490 aa18.11■□□□□ 0.49
GPC1-206ENST00000455111 NIFKQ9BYG3 293 aaKnown RBP18.11■□□□□ 0.49
GPC1-206ENST00000455111 WRAP73Q9P2S5 460 aaPredicted RBP18.11■□□□□ 0.49
GPC1-206ENST00000455111 PRKAG3Q9UGI9 489 aa18.11■□□□□ 0.49
GPC1-206ENST00000455111 CD207Q9UJ71 328 aa18.11■□□□□ 0.49
GPC1-206ENST00000455111 AKT3Q9Y243 479 aa18.11■□□□□ 0.49
GPC1-206ENST00000455111 NCK2O43639 380 aa18.1■□□□□ 0.49
GPC1-206ENST00000455111 DEXIO95424 95 aa18.1■□□□□ 0.49
GPC1-206ENST00000455111 DARSP14868 501 aaKnown RBP18.1■□□□□ 0.49
GPC1-206ENST00000455111 ECHDC2Q86YB7 292 aa18.1■□□□□ 0.49
GPC1-206ENST00000455111 ZNF579Q8NAF0 562 aaKnown RBP18.1■□□□□ 0.49
GPC1-206ENST00000455111 OXER1Q8TDS5 423 aa18.1■□□□□ 0.49
GPC1-206ENST00000455111 FAM167AQ96KS9 214 aa18.1■□□□□ 0.49
GPC1-206ENST00000455111 VAV3Q9UKW4 847 aa18.1■□□□□ 0.49
GPC1-206ENST00000455111 TPCN1Q9ULQ1 816 aa18.1■□□□□ 0.49
GPC1-206ENST00000455111 CEP131Q9UPN4 1083 aa18.1■□□□□ 0.49
GPC1-206ENST00000455111 CYP46A1Q9Y6A2 500 aa18.1■□□□□ 0.49
GPC1-206ENST00000455111 FAM205CA6NFA0 338 aa18.09■□□□□ 0.49
GPC1-206ENST00000455111 SFNP31947 248 aa18.09■□□□□ 0.49
GPC1-206ENST00000455111 JAK3P52333 1124 aa18.09■□□□□ 0.49
GPC1-206ENST00000455111 COASYQ13057 564 aa18.09■□□□□ 0.49
GPC1-206ENST00000455111 INF2Q27J81 1249 aa18.09■□□□□ 0.49
GPC1-206ENST00000455111 MTERF2Q49AM1 385 aa18.09■□□□□ 0.49
GPC1-206ENST00000455111 ANO5Q75V66 913 aa18.09■□□□□ 0.49
GPC1-206ENST00000455111 SMRP1Q8NCR6 262 aa18.09■□□□□ 0.49
GPC1-206ENST00000455111 PHF20Q9BVI0 1012 aa18.09■□□□□ 0.49
GPC1-206ENST00000455111 ATP6V0A4Q9HBG4 840 aa18.09■□□□□ 0.49
GPC1-206ENST00000455111 MEIS3P2A8K0S8 358 aa18.08■□□□□ 0.48
GPC1-206ENST00000455111 PRR33A8MZF0 331 aa18.08■□□□□ 0.48
GPC1-206ENST00000455111 DCXO43602 365 aa18.08■□□□□ 0.48
GPC1-206ENST00000455111 NDUFV1P49821 464 aa18.08■□□□□ 0.48
GPC1-206ENST00000455111 DUSP6Q16828 381 aa18.08■□□□□ 0.48
GPC1-206ENST00000455111 PLA2G4FQ68DD2 849 aa18.08■□□□□ 0.48
GPC1-206ENST00000455111 MIER3Q7Z3K6 550 aa18.08■□□□□ 0.48
GPC1-206ENST00000455111 KSR1Q8IVT5 923 aa18.08■□□□□ 0.48
GPC1-206ENST00000455111 TMEM117Q9H0C3 514 aa18.08■□□□□ 0.48
GPC1-206ENST00000455111 TLR9Q9NR96 1032 aa18.08■□□□□ 0.48
GPC1-206ENST00000455111 NRBP2Q9NSY0 501 aa18.08■□□□□ 0.48
GPC1-206ENST00000455111 PDRG1Q9NUG6 133 aa18.08■□□□□ 0.48
GPC1-206ENST00000455111 SEPT9Q9UHD8 586 aaPredicted RBP18.08■□□□□ 0.48
GPC1-206ENST00000455111 MUTYHQ9UIF7 546 aa18.08■□□□□ 0.48
GPC1-206ENST00000455111 WDFY4Q6ZS81 3184 aa18.08■□□□□ 0.48
GPC1-206ENST00000455111 HIDE1A8MVS5 230 aa18.07■□□□□ 0.48
GPC1-206ENST00000455111 LARGE1O95461 756 aa18.07■□□□□ 0.48
GPC1-206ENST00000455111 FDPSP14324 419 aaKnown RBP18.07■□□□□ 0.48
GPC1-206ENST00000455111 PLCB3Q01970 1234 aa18.07■□□□□ 0.48
GPC1-206ENST00000455111 MOXD1Q6UVY6 613 aa18.07■□□□□ 0.48
GPC1-206ENST00000455111 RNF135Q8IUD6 432 aa18.07■□□□□ 0.48
GPC1-206ENST00000455111 TRIM22Q8IYM9 498 aa18.07■□□□□ 0.48
GPC1-206ENST00000455111 FEZF2Q8TBJ5 459 aa18.07■□□□□ 0.48
GPC1-206ENST00000455111 HAS1Q92839 578 aa18.07■□□□□ 0.48
GPC1-206ENST00000455111 KCNMB3Q9NPA1 279 aa18.07■□□□□ 0.48
GPC1-206ENST00000455111 CDH22Q9UJ99 828 aa18.07■□□□□ 0.48
GPC1-206ENST00000455111 TECTAO75443 2155 aa18.07■□□□□ 0.48
GPC1-206ENST00000455111 A0A087WZ62 844 aa18.06■□□□□ 0.48
GPC1-206ENST00000455111 A0A0U1RQF3 1178 aa18.06■□□□□ 0.48
GPC1-206ENST00000455111 LOC730098B7Z3J9 87 aa18.06■□□□□ 0.48
GPC1-206ENST00000455111 WNT7AO00755 349 aa18.06■□□□□ 0.48
GPC1-206ENST00000455111 B4GALT3O60512 393 aa18.06■□□□□ 0.48
GPC1-206ENST00000455111 UBE3AQ05086 875 aa18.06■□□□□ 0.48
GPC1-206ENST00000455111 TBC1D8BQ0IIM8 1120 aa18.06■□□□□ 0.48
GPC1-206ENST00000455111 NONOQ15233 471 aaKnown RBP eCLIP18.06■□□□□ 0.48
GPC1-206ENST00000455111 XKR3Q5GH77 459 aa18.06■□□□□ 0.48
GPC1-206ENST00000455111 ODR4Q5SWX8 454 aa18.06■□□□□ 0.48
GPC1-206ENST00000455111 SPOUT1Q5T280 376 aaKnown RBP18.06■□□□□ 0.48
GPC1-206ENST00000455111 KCNT2Q6UVM3 1135 aa18.06■□□□□ 0.48
GPC1-206ENST00000455111 FAM43BQ6ZT52 329 aaPredicted RBP18.06■□□□□ 0.48
GPC1-206ENST00000455111 TMEM173Q86WV6 379 aaPredicted RBP18.06■□□□□ 0.48
GPC1-206ENST00000455111 RDM1Q8NG50 284 aa18.06■□□□□ 0.48
GPC1-206ENST00000455111 HELQQ8TDG4 1101 aa18.06■□□□□ 0.48
GPC1-206ENST00000455111 SUSD6Q92537 303 aa18.06■□□□□ 0.48
GPC1-206ENST00000455111 MRPS27Q92552 414 aaKnown RBP18.06■□□□□ 0.48
GPC1-206ENST00000455111 MAP7D2Q96T17 732 aa18.06■□□□□ 0.48
GPC1-206ENST00000455111 FDXACB1Q9BRP7 624 aaPredicted RBP18.06■□□□□ 0.48
GPC1-206ENST00000455111 USP15Q9Y4E8 981 aaPredicted RBP18.06■□□□□ 0.48
GPC1-206ENST00000455111 PCDHB12Q9Y5F1 795 aa18.06■□□□□ 0.48
GPC1-206ENST00000455111 KMT2EQ8IZD2 1858 aa18.05■□□□□ 0.48
GPC1-206ENST00000455111 PFKFB2O60825 505 aa18.05■□□□□ 0.48
GPC1-206ENST00000455111 MAFO75444 373 aaPredicted RBP18.05■□□□□ 0.48
GPC1-206ENST00000455111 ALADP13716 330 aa18.05■□□□□ 0.48
GPC1-206ENST00000455111 LAG3P18627 525 aa18.05■□□□□ 0.48
GPC1-206ENST00000455111 HOXD11P31277 338 aaPredicted RBP18.05■□□□□ 0.48
GPC1-206ENST00000455111 NPEPPSP55786 919 aa18.05■□□□□ 0.48
GPC1-206ENST00000455111 SPIRE1Q08AE8 756 aa18.05■□□□□ 0.48
GPC1-206ENST00000455111 LETM2Q2VYF4 491 aa18.05■□□□□ 0.48
GPC1-206ENST00000455111 PLPP4Q5VZY2 271 aa18.05■□□□□ 0.48
GPC1-206ENST00000455111 SYCE2Q6PIF2 218 aa18.05■□□□□ 0.48
GPC1-206ENST00000455111 THNSL1Q8IYQ7 743 aa18.05■□□□□ 0.48
GPC1-206ENST00000455111 SLC39A11Q8N1S5 342 aa18.05■□□□□ 0.48
GPC1-206ENST00000455111 BCL7CQ8WUZ0 217 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms