RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 ITIH6Q6UXX5 1313 aa12.11□□□□□ -0.47
DDR1-240ENST00000454612 EML1O00423 815 aa12.11□□□□□ -0.47
DDR1-240ENST00000454612 TUBBP07437 444 aa12.11□□□□□ -0.47
DDR1-240ENST00000454612 NPR1P16066 1061 aa12.11□□□□□ -0.47
DDR1-240ENST00000454612 ARHGEF16Q5VV41 709 aa12.11□□□□□ -0.47
DDR1-240ENST00000454612 CENPPQ6IPU0 288 aa12.11□□□□□ -0.47
DDR1-240ENST00000454612 CHURC1Q8WUH1 139 aa12.11□□□□□ -0.47
DDR1-240ENST00000454612 GLG1Q92896 1179 aa12.11□□□□□ -0.47
DDR1-240ENST00000454612 CICQ96RK0 1608 aaPredicted RBP12.11□□□□□ -0.47
DDR1-240ENST00000454612 BAZ2AQ9UIF9 1905 aaKnown RBP12.11□□□□□ -0.47
DDR1-240ENST00000454612 TTI1O43156 1089 aa12.11□□□□□ -0.47
DDR1-240ENST00000454612 RAD51CO43502 376 aa12.11□□□□□ -0.47
DDR1-240ENST00000454612 MYL1P05976 194 aa12.11□□□□□ -0.47
DDR1-240ENST00000454612 ITGA4P13612 1032 aa12.11□□□□□ -0.47
DDR1-240ENST00000454612 MIIPQ5JXC2 388 aa12.11□□□□□ -0.47
DDR1-240ENST00000454612 CDAN1Q8IWY9 1227 aa12.11□□□□□ -0.47
DDR1-240ENST00000454612 CABS1Q96KC9 395 aa12.11□□□□□ -0.47
DDR1-240ENST00000454612 POP1Q99575 1024 aaKnown RBP12.11□□□□□ -0.47
DDR1-240ENST00000454612 MAGEF1Q9HAY2 307 aa12.11□□□□□ -0.47
DDR1-240ENST00000454612 CEP72Q9P209 647 aa12.11□□□□□ -0.47
DDR1-240ENST00000454612 LARSQ9P2J5 1176 aaKnown RBP12.11□□□□□ -0.47
DDR1-240ENST00000454612 TAF1LQ8IZX4 1826 aa12.11□□□□□ -0.47
DDR1-240ENST00000454612 LRRIQ4A6NIV6 560 aa12.1□□□□□ -0.47
DDR1-240ENST00000454612 HNRNPDLO14979 420 aaKnown RBP12.1□□□□□ -0.47
DDR1-240ENST00000454612 MSH4O15457 936 aa12.1□□□□□ -0.47
DDR1-240ENST00000454612 EPHB4P54760 987 aa12.1□□□□□ -0.47
DDR1-240ENST00000454612 SEZ6Q53EL9 994 aa12.1□□□□□ -0.47
DDR1-240ENST00000454612 CCDC121Q6ZUS5 278 aa12.1□□□□□ -0.47
DDR1-240ENST00000454612 PNMA8AQ86V59 439 aaPredicted RBP12.1□□□□□ -0.47
DDR1-240ENST00000454612 PACS2Q86VP3 889 aa12.1□□□□□ -0.47
DDR1-240ENST00000454612 LXNQ9BS40 222 aa12.1□□□□□ -0.47
DDR1-240ENST00000454612 PI4K2AQ9BTU6 479 aa12.1□□□□□ -0.47
DDR1-240ENST00000454612 TEKT3Q9BXF9 490 aa12.1□□□□□ -0.47
DDR1-240ENST00000454612 GLIS2Q9BZE0 524 aaPredicted RBP12.1□□□□□ -0.47
DDR1-240ENST00000454612 GNA14O95837 355 aa12.1□□□□□ -0.47
DDR1-240ENST00000454612 ARP10275 920 aa12.1□□□□□ -0.47
DDR1-240ENST00000454612 SMAD1Q15797 465 aaKnown RBP12.1□□□□□ -0.47
DDR1-240ENST00000454612 TMEM179Q6ZVK1 233 aa12.1□□□□□ -0.47
DDR1-240ENST00000454612 SYNCQ9H7C4 482 aa12.1□□□□□ -0.47
DDR1-240ENST00000454612 TIAM2Q8IVF5 1701 aa12.1□□□□□ -0.47
DDR1-240ENST00000454612 IPO5O00410 1097 aaKnown RBP12.1□□□□□ -0.47
DDR1-240ENST00000454612 PSMD14O00487 310 aa12.1□□□□□ -0.47
DDR1-240ENST00000454612 ATP8B1O43520 1251 aa12.1□□□□□ -0.47
DDR1-240ENST00000454612 ACSL3O95573 720 aa12.1□□□□□ -0.47
DDR1-240ENST00000454612 KRT19P08727 400 aa12.1□□□□□ -0.47
DDR1-240ENST00000454612 CD19P15391 556 aa12.1□□□□□ -0.47
DDR1-240ENST00000454612 GCFC2P16383 781 aaKnown RBP12.1□□□□□ -0.47
DDR1-240ENST00000454612 PBX1P40424 430 aa12.1□□□□□ -0.47
DDR1-240ENST00000454612 GALCP54803 685 aa12.1□□□□□ -0.47
DDR1-240ENST00000454612 MTERF2Q49AM1 385 aa12.1□□□□□ -0.47
DDR1-240ENST00000454612 FAM182AQ5T1J6 154 aa12.1□□□□□ -0.47
DDR1-240ENST00000454612 SYCP2LQ5T4T6 812 aa12.1□□□□□ -0.47
DDR1-240ENST00000454612 SEL1L2Q5TEA6 688 aa12.1□□□□□ -0.47
DDR1-240ENST00000454612 AADACL2Q6P093 401 aa12.1□□□□□ -0.47
DDR1-240ENST00000454612 SP8Q8IXZ3 490 aa12.1□□□□□ -0.47
DDR1-240ENST00000454612 ZNF507Q8TCN5 953 aa12.1□□□□□ -0.47
DDR1-240ENST00000454612 PIK3R5Q8WYR1 880 aa12.1□□□□□ -0.47
DDR1-240ENST00000454612 RPGRIP1Q96KN7 1286 aa12.1□□□□□ -0.47
DDR1-240ENST00000454612 CALR3Q96L12 384 aaKnown RBP12.1□□□□□ -0.47
DDR1-240ENST00000454612 ZIM3Q96PE6 472 aa12.1□□□□□ -0.47
DDR1-240ENST00000454612 UTRNP46939 3433 aa12.1□□□□□ -0.47
DDR1-240ENST00000454612 A0A1W2PRG0 241 aa12.09□□□□□ -0.47
DDR1-240ENST00000454612 LRRC10BA6NIK2 292 aa12.09□□□□□ -0.47
DDR1-240ENST00000454612 SART1O43290 800 aaKnown RBP12.09□□□□□ -0.47
DDR1-240ENST00000454612 EVI5O60447 810 aa12.09□□□□□ -0.47
DDR1-240ENST00000454612 ATF7P17544 494 aaPredicted RBP12.09□□□□□ -0.47
DDR1-240ENST00000454612 CD58P19256 250 aa12.09□□□□□ -0.47
DDR1-240ENST00000454612 MARK3P27448 753 aa12.09□□□□□ -0.47
DDR1-240ENST00000454612 SATB1Q01826 763 aa12.09□□□□□ -0.47
DDR1-240ENST00000454612 CALCOCO2Q13137 446 aa12.09□□□□□ -0.47
DDR1-240ENST00000454612 PADI6Q6TGC4 694 aa12.09□□□□□ -0.47
DDR1-240ENST00000454612 MASTLQ96GX5 879 aa12.09□□□□□ -0.47
DDR1-240ENST00000454612 LBHD1Q9BQE6 289 aaPredicted RBP12.09□□□□□ -0.47
DDR1-240ENST00000454612 KLHL11Q9NVR0 708 aa12.09□□□□□ -0.47
DDR1-240ENST00000454612 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.09□□□□□ -0.47
DDR1-240ENST00000454612 CHD4Q14839 1912 aa12.09□□□□□ -0.47
DDR1-240ENST00000454612 FGRP09769 529 aa12.09□□□□□ -0.47
DDR1-240ENST00000454612 SPP2Q13103 211 aa12.09□□□□□ -0.47
DDR1-240ENST00000454612 NEDD9Q14511 834 aa12.09□□□□□ -0.47
DDR1-240ENST00000454612 FBXW10Q5XX13 1052 aa12.09□□□□□ -0.47
DDR1-240ENST00000454612 SEPT14Q6ZU15 432 aa12.09□□□□□ -0.47
DDR1-240ENST00000454612 CEP170P1Q96L14 293 aa12.09□□□□□ -0.47
DDR1-240ENST00000454612 IRAK4Q9NWZ3 460 aa12.09□□□□□ -0.47
DDR1-240ENST00000454612 DOCK2Q92608 1830 aa12.09□□□□□ -0.47
DDR1-240ENST00000454612 EMSYQ7Z589 1322 aa12.09□□□□□ -0.47
DDR1-240ENST00000454612 PGRMC1O00264 195 aaKnown RBP12.09□□□□□ -0.47
DDR1-240ENST00000454612 TUBB4BP68371 445 aa12.09□□□□□ -0.47
DDR1-240ENST00000454612 LRRC14Q15048 493 aa12.09□□□□□ -0.47
DDR1-240ENST00000454612 CYP4F22Q6NT55 531 aa12.09□□□□□ -0.47
DDR1-240ENST00000454612 APOBEC3HQ6NTF7 200 aaKnown RBP12.09□□□□□ -0.47
DDR1-240ENST00000454612 ZNF571Q7Z3V5 609 aaPredicted RBP12.09□□□□□ -0.47
DDR1-240ENST00000454612 NLRX1Q86UT6 975 aa12.09□□□□□ -0.47
DDR1-240ENST00000454612 CDR2LQ86X02 465 aaPredicted RBP12.09□□□□□ -0.47
DDR1-240ENST00000454612 TSEN2Q8NCE0 465 aaKnown RBP12.09□□□□□ -0.47
DDR1-240ENST00000454612 ZNF653Q96CK0 615 aa12.09□□□□□ -0.47
DDR1-240ENST00000454612 ERGIC2Q96RQ1 377 aa12.09□□□□□ -0.47
DDR1-240ENST00000454612 RIOX1Q9H6W3 641 aa12.09□□□□□ -0.47
DDR1-240ENST00000454612 SPATS2LQ9NUQ6 558 aaKnown RBP12.09□□□□□ -0.47
DDR1-240ENST00000454612 BAIAP2L1Q9UHR4 511 aa12.09□□□□□ -0.47
DDR1-240ENST00000454612 FTLP02792 175 aaPredicted RBP12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms