RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 PPP1R18Q6NYC8 613 aa6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 MIS18BP1Q6P0N0 1132 aa6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 KCNT2Q6UVM3 1135 aa6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 ASCL5Q7RTU5 278 aa6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 SGMS1Q86VZ5 419 aa6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 ABI1Q8IZP0 508 aa6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 LINC01465Q8N7H1 131 aa6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 TMEM105Q8N8V8 129 aa6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 ST13P5Q8NFI4 369 aaPredicted RBP6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 CRYGNQ8WXF5 182 aa6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 MRPS27Q92552 414 aaKnown RBP6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 ATOH1Q92858 354 aaPredicted RBP6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 PHKBQ93100 1093 aa6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 LENG9Q96B70 501 aa6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 ZNF558Q96NG5 402 aa6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 CASD1Q96PB1 797 aa6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 ZNF577Q9BSK1 485 aa6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 VN1R3Q9BXE9 311 aa6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 GBP3Q9H0R5 595 aa6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 TMEM161AQ9NX61 479 aa6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 BARHL2Q9NY43 387 aa6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 INPP5FQ9Y2H2 1132 aa6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 SAMM50Q9Y512 469 aa6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 ZNF292O60281 2723 aa6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 COL1A2P08123 1366 aa6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 C2orf71A6NGG8 1288 aa6.79□□□□□ -1.32
HLA-DPA3-207ENST00000454398 HBP1O60381 514 aa6.79□□□□□ -1.32
HLA-DPA3-207ENST00000454398 CLASP2O75122 1294 aaKnown RBP6.79□□□□□ -1.32
HLA-DPA3-207ENST00000454398 ATG7O95352 703 aa6.79□□□□□ -1.32
HLA-DPA3-207ENST00000454398 SMARCA1P28370 1054 aa6.79□□□□□ -1.32
HLA-DPA3-207ENST00000454398 ADD1P35611 737 aaKnown RBP6.79□□□□□ -1.32
HLA-DPA3-207ENST00000454398 CRYBB1P53674 252 aaPredicted RBP6.79□□□□□ -1.32
HLA-DPA3-207ENST00000454398 AP3B2Q13367 1082 aa6.79□□□□□ -1.32
HLA-DPA3-207ENST00000454398 AAMPQ13685 434 aa6.79□□□□□ -1.32
HLA-DPA3-207ENST00000454398 NECTIN1Q15223 517 aa6.79□□□□□ -1.32
HLA-DPA3-207ENST00000454398 NAALADL2Q58DX5 795 aa6.79□□□□□ -1.32
HLA-DPA3-207ENST00000454398 PLA2G4FQ68DD2 849 aa6.79□□□□□ -1.32
HLA-DPA3-207ENST00000454398 TMC5Q6UXY8 1006 aa6.79□□□□□ -1.32
HLA-DPA3-207ENST00000454398 TMC7Q7Z402 723 aa6.79□□□□□ -1.32
HLA-DPA3-207ENST00000454398 ECHDC2Q86YB7 292 aa6.79□□□□□ -1.32
HLA-DPA3-207ENST00000454398 REXO1Q8N1G1 1221 aaKnown RBP6.79□□□□□ -1.32
HLA-DPA3-207ENST00000454398 SLC39A11Q8N1S5 342 aa6.79□□□□□ -1.32
HLA-DPA3-207ENST00000454398 NLRP7Q8WX94 980 aa6.79□□□□□ -1.32
HLA-DPA3-207ENST00000454398 MAP7D2Q96T17 732 aa6.79□□□□□ -1.32
HLA-DPA3-207ENST00000454398 TMEM117Q9H0C3 514 aa6.79□□□□□ -1.32
HLA-DPA3-207ENST00000454398 ADAMTS10Q9H324 1103 aa6.79□□□□□ -1.32
HLA-DPA3-207ENST00000454398 NCOA5Q9HCD5 579 aaKnown RBP6.79□□□□□ -1.32
HLA-DPA3-207ENST00000454398 AAASQ9NRG9 546 aa6.79□□□□□ -1.32
HLA-DPA3-207ENST00000454398 C1orf112Q9NSG2 853 aa6.79□□□□□ -1.32
HLA-DPA3-207ENST00000454398 VPS54Q9P1Q0 977 aa6.79□□□□□ -1.32
HLA-DPA3-207ENST00000454398 SEPT9Q9UHD8 586 aaPredicted RBP6.79□□□□□ -1.32
HLA-DPA3-207ENST00000454398 SQORQ9Y6N5 450 aa6.79□□□□□ -1.32
HLA-DPA3-207ENST00000454398 OTOGLQ3ZCN5 2332 aa6.79□□□□□ -1.32
HLA-DPA3-207ENST00000454398 EPG5Q9HCE0 2579 aa6.79□□□□□ -1.32
HLA-DPA3-207ENST00000454398 ARID2Q68CP9 1835 aa6.78□□□□□ -1.32
HLA-DPA3-207ENST00000454398 TPRP12270 2363 aaKnown RBP6.78□□□□□ -1.32
HLA-DPA3-207ENST00000454398 F8W810 466 aa6.78□□□□□ -1.32
HLA-DPA3-207ENST00000454398 GPR182O15218 404 aa6.78□□□□□ -1.32
HLA-DPA3-207ENST00000454398 TDP2O95551 362 aa6.78□□□□□ -1.32
HLA-DPA3-207ENST00000454398 OATP04181 439 aa6.78□□□□□ -1.32
HLA-DPA3-207ENST00000454398 SRGAP2BP0DMP2 458 aa6.78□□□□□ -1.32
HLA-DPA3-207ENST00000454398 DARSP14868 501 aaKnown RBP6.78□□□□□ -1.32
HLA-DPA3-207ENST00000454398 AVPR2P30518 371 aa6.78□□□□□ -1.32
HLA-DPA3-207ENST00000454398 SLC26A2P50443 739 aa6.78□□□□□ -1.32
HLA-DPA3-207ENST00000454398 GPC3P51654 580 aa6.78□□□□□ -1.32
HLA-DPA3-207ENST00000454398 AFF1P51825 1210 aaKnown RBP6.78□□□□□ -1.32
HLA-DPA3-207ENST00000454398 BCAR1P56945 870 aa6.78□□□□□ -1.32
HLA-DPA3-207ENST00000454398 UBE3AQ05086 875 aa6.78□□□□□ -1.32
HLA-DPA3-207ENST00000454398 MTMR3Q13615 1198 aa6.78□□□□□ -1.32
HLA-DPA3-207ENST00000454398 MTERF2Q49AM1 385 aa6.78□□□□□ -1.32
HLA-DPA3-207ENST00000454398 ZNF484Q5JVG2 852 aa6.78□□□□□ -1.32
HLA-DPA3-207ENST00000454398 CWF19L1Q69YN2 538 aaKnown RBP6.78□□□□□ -1.32
HLA-DPA3-207ENST00000454398 EFCAB12Q6NXP0 572 aa6.78□□□□□ -1.32
HLA-DPA3-207ENST00000454398 POTEGQ6S5H5 508 aa6.78□□□□□ -1.32
HLA-DPA3-207ENST00000454398 BMP8AQ7Z5Y6 402 aa6.78□□□□□ -1.32
HLA-DPA3-207ENST00000454398 FRMD5Q7Z6J6 570 aa6.78□□□□□ -1.32
HLA-DPA3-207ENST00000454398 KSR1Q8IVT5 923 aa6.78□□□□□ -1.32
HLA-DPA3-207ENST00000454398 TDRD5Q8NAT2 981 aaKnown RBP6.78□□□□□ -1.32
HLA-DPA3-207ENST00000454398 FLCNQ8NFG4 579 aa6.78□□□□□ -1.32
HLA-DPA3-207ENST00000454398 NLRP4Q96MN2 994 aa6.78□□□□□ -1.32
HLA-DPA3-207ENST00000454398 KCNH6Q9H252 994 aa6.78□□□□□ -1.32
HLA-DPA3-207ENST00000454398 UNC45AQ9H3U1 944 aa6.78□□□□□ -1.32
HLA-DPA3-207ENST00000454398 RBM28Q9NW13 759 aaKnown RBP6.78□□□□□ -1.32
HLA-DPA3-207ENST00000454398 SPG21Q9NZD8 308 aa6.78□□□□□ -1.32
HLA-DPA3-207ENST00000454398 DNAJB4Q9UDY4 337 aa6.78□□□□□ -1.32
HLA-DPA3-207ENST00000454398 PIN4Q9Y237 131 aaKnown RBP6.78□□□□□ -1.32
HLA-DPA3-207ENST00000454398 DOCK8Q8NF50 2099 aa6.78□□□□□ -1.32
HLA-DPA3-207ENST00000454398 DOCK6Q96HP0 2047 aa6.77□□□□□ -1.32
HLA-DPA3-207ENST00000454398 PRR23AA6NEV1 266 aa6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 SPDYE4A6NLX3 237 aa6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 C2CD2LO14523 706 aa6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 MSH4O15457 936 aa6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 MAFGO15525 162 aa6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 NARSO43776 548 aaKnown RBP6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 ST18O60284 1047 aa6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 STBD1O95210 358 aa6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 FOSP01100 380 aaPredicted RBP6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 RPLP2P05387 115 aaKnown RBP6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 PSAPP07602 524 aa6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 PPM1AP35813 382 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms