RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 ZRSR1Q15695 479 aaKnown RBP31.15■■■□□ 2.58
SMARCC1-203ENST00000454240 TMEM119Q4V9L6 283 aa31.15■■■□□ 2.58
SMARCC1-203ENST00000454240 HABP4Q5JVS0 413 aaKnown RBP31.15■■■□□ 2.58
SMARCC1-203ENST00000454240 KCNK18Q7Z418 384 aa31.15■■■□□ 2.58
SMARCC1-203ENST00000454240 TMEM40Q8WWA1 233 aa31.15■■■□□ 2.58
SMARCC1-203ENST00000454240 OSMRQ99650 979 aa31.15■■■□□ 2.58
SMARCC1-203ENST00000454240 IFIH1Q9BYX4 1025 aaKnown RBP31.15■■■□□ 2.58
SMARCC1-203ENST00000454240 MTIF3Q9H2K0 278 aaKnown RBP31.15■■■□□ 2.58
SMARCC1-203ENST00000454240 BHMT2Q9H2M3 363 aa31.15■■■□□ 2.58
SMARCC1-203ENST00000454240 ARHGEF35A5YM69 484 aa31.14■■■□□ 2.58
SMARCC1-203ENST00000454240 LRIT3Q3SXY7 679 aa31.14■■■□□ 2.58
SMARCC1-203ENST00000454240 SPECC1Q5M775 1068 aa31.14■■■□□ 2.58
SMARCC1-203ENST00000454240 PADI6Q6TGC4 694 aa31.14■■■□□ 2.58
SMARCC1-203ENST00000454240 USP49Q70CQ1 688 aa31.14■■■□□ 2.58
SMARCC1-203ENST00000454240 APBB2Q92870 758 aa31.14■■■□□ 2.58
SMARCC1-203ENST00000454240 EPSTI1Q96J88 318 aa31.14■■■□□ 2.58
SMARCC1-203ENST00000454240 LAMA3Q16787 3333 aa31.14■■■□□ 2.58
SMARCC1-203ENST00000454240 ABHD14A-ACY1A0A1B0GW23 586 aa31.13■■■□□ 2.57
SMARCC1-203ENST00000454240 USO1O60763 962 aaKnown RBP31.13■■■□□ 2.57
SMARCC1-203ENST00000454240 IKBKEQ14164 716 aa31.13■■■□□ 2.57
SMARCC1-203ENST00000454240 RHPN2Q8IUC4 686 aa31.13■■■□□ 2.57
SMARCC1-203ENST00000454240 PRPF31Q8WWY3 499 aaKnown RBP31.13■■■□□ 2.57
SMARCC1-203ENST00000454240 PSPC1Q8WXF1 523 aaKnown RBP31.13■■■□□ 2.57
SMARCC1-203ENST00000454240 CALML4Q96GE6 196 aa31.13■■■□□ 2.57
SMARCC1-203ENST00000454240 CDK5RAP3Q96JB5 506 aa31.13■■■□□ 2.57
SMARCC1-203ENST00000454240 PLIN2Q99541 437 aa31.13■■■□□ 2.57
SMARCC1-203ENST00000454240 RCOR1Q9UKL0 485 aa31.13■■■□□ 2.57
SMARCC1-203ENST00000454240 ATP6V1DQ9Y5K8 247 aa31.13■■■□□ 2.57
SMARCC1-203ENST00000454240 LAMA2P24043 3122 aaKnown RBP31.13■■■□□ 2.57
SMARCC1-203ENST00000454240 PTPRSQ13332 1948 aa31.12■■■□□ 2.57
SMARCC1-203ENST00000454240 CD52P31358 61 aa31.12■■■□□ 2.57
SMARCC1-203ENST00000454240 KSR1Q8IVT5 923 aa31.12■■■□□ 2.57
SMARCC1-203ENST00000454240 KCNG4Q8TDN1 519 aa31.12■■■□□ 2.57
SMARCC1-203ENST00000454240 ZNF668Q96K58 619 aaPredicted RBP31.12■■■□□ 2.57
SMARCC1-203ENST00000454240 PADI3Q9ULW8 664 aa31.12■■■□□ 2.57
SMARCC1-203ENST00000454240 NOC2LQ9Y3T9 749 aaKnown RBP31.12■■■□□ 2.57
SMARCC1-203ENST00000454240 COL4A3BPQ9Y5P4 624 aa31.12■■■□□ 2.57
SMARCC1-203ENST00000454240 ASAP2O43150 1006 aa31.11■■■□□ 2.57
SMARCC1-203ENST00000454240 EFCAB14O75071 495 aa31.11■■■□□ 2.57
SMARCC1-203ENST00000454240 CYP11B2P19099 503 aa31.11■■■□□ 2.57
SMARCC1-203ENST00000454240 ARL2P36404 184 aa31.11■■■□□ 2.57
SMARCC1-203ENST00000454240 ZNF410Q86VK4 478 aa31.11■■■□□ 2.57
SMARCC1-203ENST00000454240 MCPH1Q8NEM0 835 aa31.11■■■□□ 2.57
SMARCC1-203ENST00000454240 SYMPKQ92797 1274 aaKnown RBP31.11■■■□□ 2.57
SMARCC1-203ENST00000454240 ZBBXA8MT70 800 aa31.1■■■□□ 2.57
SMARCC1-203ENST00000454240 RPS6KA5O75582 802 aa31.1■■■□□ 2.57
SMARCC1-203ENST00000454240 EIF4BP23588 611 aaKnown RBP31.1■■■□□ 2.57
SMARCC1-203ENST00000454240 LAMTOR4Q0VGL1 99 aa31.1■■■□□ 2.57
SMARCC1-203ENST00000454240 KARSQ15046 597 aaKnown RBP31.1■■■□□ 2.57
SMARCC1-203ENST00000454240 NLRP7Q8WX94 980 aa31.1■■■□□ 2.57
SMARCC1-203ENST00000454240 ERVK-5Q9HDB9 667 aa31.1■■■□□ 2.57
SMARCC1-203ENST00000454240 SLC4A7Q9Y6M7 1214 aa31.1■■■□□ 2.57
SMARCC1-203ENST00000454240 A0A087WZ62 844 aa31.09■■■□□ 2.57
SMARCC1-203ENST00000454240 DARSP14868 501 aaKnown RBP31.09■■■□□ 2.57
SMARCC1-203ENST00000454240 WDR5P61964 334 aaKnown RBP31.09■■■□□ 2.57
SMARCC1-203ENST00000454240 PAK2Q13177 524 aa31.09■■■□□ 2.57
SMARCC1-203ENST00000454240 MXD4Q14582 209 aaPredicted RBP31.09■■■□□ 2.57
SMARCC1-203ENST00000454240 LRRC15Q8TF66 581 aa31.09■■■□□ 2.57
SMARCC1-203ENST00000454240 CHAMP1Q96JM3 812 aa31.09■■■□□ 2.57
SMARCC1-203ENST00000454240 FDXACB1Q9BRP7 624 aaPredicted RBP31.09■■■□□ 2.57
SMARCC1-203ENST00000454240 CUTAO60888 179 aa31.08■■■□□ 2.57
SMARCC1-203ENST00000454240 PLCG1P19174 1290 aa31.08■■■□□ 2.57
SMARCC1-203ENST00000454240 KRT85P78386 507 aa31.08■■■□□ 2.57
SMARCC1-203ENST00000454240 ODR4Q5SWX8 454 aa31.08■■■□□ 2.57
SMARCC1-203ENST00000454240 FAM43BQ6ZT52 329 aaPredicted RBP31.08■■■□□ 2.57
SMARCC1-203ENST00000454240 MAEAQ7L5Y9 396 aa31.08■■■□□ 2.57
SMARCC1-203ENST00000454240 FAM228AQ86W67 206 aa31.08■■■□□ 2.57
SMARCC1-203ENST00000454240 SYT2Q8N9I0 419 aaPredicted RBP31.08■■■□□ 2.57
SMARCC1-203ENST00000454240 NLRP4Q96MN2 994 aa31.08■■■□□ 2.57
SMARCC1-203ENST00000454240 SCLT1Q96NL6 688 aa31.08■■■□□ 2.57
SMARCC1-203ENST00000454240 GCOM2Q9BZD3 368 aaPredicted RBP31.08■■■□□ 2.57
SMARCC1-203ENST00000454240 IFT122Q9HBG6 1241 aa31.08■■■□□ 2.57
SMARCC1-203ENST00000454240 GPRC5CQ9NQ84 441 aa31.08■■■□□ 2.57
SMARCC1-203ENST00000454240 ST3GAL5Q9UNP4 418 aa31.08■■■□□ 2.57
SMARCC1-203ENST00000454240 GPR182O15218 404 aa31.07■■■□□ 2.56
SMARCC1-203ENST00000454240 SLC12A3P55017 1021 aa31.07■■■□□ 2.56
SMARCC1-203ENST00000454240 AXDND1Q5T1B0 1012 aaPredicted RBP31.07■■■□□ 2.56
SMARCC1-203ENST00000454240 RINT1Q6NUQ1 792 aa31.07■■■□□ 2.56
SMARCC1-203ENST00000454240 ASAP3Q8TDY4 903 aa31.07■■■□□ 2.56
SMARCC1-203ENST00000454240 POLR3FQ9H1D9 316 aaPredicted RBP31.07■■■□□ 2.56
SMARCC1-203ENST00000454240 BLOC1S4Q9NUP1 217 aa31.07■■■□□ 2.56
SMARCC1-203ENST00000454240 GBF1Q92538 1859 aa31.06■■■□□ 2.56
SMARCC1-203ENST00000454240 HSFX4A0A1B0GTS1 333 aaPredicted RBP31.06■■■□□ 2.56
SMARCC1-203ENST00000454240 HSFX3A0A1B0GWH4 333 aaPredicted RBP31.06■■■□□ 2.56
SMARCC1-203ENST00000454240 PLA2G4BP0C869 781 aa31.06■■■□□ 2.56
SMARCC1-203ENST00000454240 SRGAP2CP0DJJ0 459 aa31.06■■■□□ 2.56
SMARCC1-203ENST00000454240 GLRA2P23416 452 aa31.06■■■□□ 2.56
SMARCC1-203ENST00000454240 TXLNAP40222 546 aa31.06■■■□□ 2.56
SMARCC1-203ENST00000454240 POU5F1BQ06416 359 aa31.06■■■□□ 2.56
SMARCC1-203ENST00000454240 NFX1Q12986 1120 aaKnown RBP31.06■■■□□ 2.56
SMARCC1-203ENST00000454240 C1orf186Q6ZWK4 172 aa31.06■■■□□ 2.56
SMARCC1-203ENST00000454240 RASSF8Q8NHQ8 419 aa31.06■■■□□ 2.56
SMARCC1-203ENST00000454240 PHOSPHO2Q8TCD6 241 aa31.06■■■□□ 2.56
SMARCC1-203ENST00000454240 FTHL17Q9BXU8 183 aa31.06■■■□□ 2.56
SMARCC1-203ENST00000454240 TMX1Q9H3N1 280 aa31.06■■■□□ 2.56
SMARCC1-203ENST00000454240 CCDC39Q9UFE4 941 aa31.06■■■□□ 2.56
SMARCC1-203ENST00000454240 PCDHA7Q9UN72 937 aa31.06■■■□□ 2.56
SMARCC1-203ENST00000454240 LOC101059915A0A1B0GWI6 518 aaPredicted RBP31.05■■■□□ 2.56
SMARCC1-203ENST00000454240 KCNJ6P48051 423 aa31.05■■■□□ 2.56
SMARCC1-203ENST00000454240 FAM102BQ5T8I3 360 aa31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms